RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 ACTN2P35609 894 aa12.99□□□□□ -0.33
TRAPPC4-212ENST00000533058 CD86P42081 329 aa12.99□□□□□ -0.33
TRAPPC4-212ENST00000533058 HNRNPKP61978 463 aaKnown RBP eCLIP12.99□□□□□ -0.33
TRAPPC4-212ENST00000533058 WASHC5Q12768 1159 aa12.99□□□□□ -0.33
TRAPPC4-212ENST00000533058 PTK2BQ14289 1009 aa12.99□□□□□ -0.33
TRAPPC4-212ENST00000533058 FZD2Q14332 565 aa12.99□□□□□ -0.33
TRAPPC4-212ENST00000533058 CCNG2Q16589 344 aa12.99□□□□□ -0.33
TRAPPC4-212ENST00000533058 ALG1LQ6GMV1 187 aa12.99□□□□□ -0.33
TRAPPC4-212ENST00000533058 ITPRIPL1Q6GPH6 555 aa12.99□□□□□ -0.33
TRAPPC4-212ENST00000533058 ARHGEF18Q6ZSZ5 1173 aa12.99□□□□□ -0.33
TRAPPC4-212ENST00000533058 NYAP1Q6ZVC0 841 aa12.99□□□□□ -0.33
TRAPPC4-212ENST00000533058 PARGQ86W56 976 aa12.99□□□□□ -0.33
TRAPPC4-212ENST00000533058 ZSWIM9Q86XI8 627 aa12.99□□□□□ -0.33
TRAPPC4-212ENST00000533058 ZNF567Q8N184 647 aa12.99□□□□□ -0.33
TRAPPC4-212ENST00000533058 SLC25A45Q8N413 288 aa12.99□□□□□ -0.33
TRAPPC4-212ENST00000533058 CHCHD4Q8N4Q1 142 aa12.99□□□□□ -0.33
TRAPPC4-212ENST00000533058 CNTD1Q8N815 330 aa12.99□□□□□ -0.33
TRAPPC4-212ENST00000533058 CCDC89Q8N998 374 aa12.99□□□□□ -0.33
TRAPPC4-212ENST00000533058 TP53I13Q8NBR0 393 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC4-212ENST00000533058 SLC35B2Q8TB61 432 aa12.99□□□□□ -0.33
TRAPPC4-212ENST00000533058 ACTRT1Q8TDG2 376 aa12.99□□□□□ -0.33
TRAPPC4-212ENST00000533058 NSMCE3Q96MG7 304 aa12.99□□□□□ -0.33
TRAPPC4-212ENST00000533058 TMEM121BQ9BXQ6 578 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC4-212ENST00000533058 GLOD4Q9HC38 313 aa12.99□□□□□ -0.33
TRAPPC4-212ENST00000533058 TRHDEQ9UKU6 1024 aa12.99□□□□□ -0.33
TRAPPC4-212ENST00000533058 DOCK9Q9BZ29 2069 aa12.99□□□□□ -0.33
TRAPPC4-212ENST00000533058 SHROOM3Q8TF72 1996 aa12.99□□□□□ -0.33
TRAPPC4-212ENST00000533058 TMEM131Q92545 1883 aa12.99□□□□□ -0.33
TRAPPC4-212ENST00000533058 CHD8Q9HCK8 2581 aa12.99□□□□□ -0.33
TRAPPC4-212ENST00000533058 COL5A1P20908 1838 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC4-212ENST00000533058 NEMP2A6NFY4 417 aa12.98□□□□□ -0.33
TRAPPC4-212ENST00000533058 PIAS2O75928 621 aa12.98□□□□□ -0.33
TRAPPC4-212ENST00000533058 NFKB1P19838 968 aa12.98□□□□□ -0.33
TRAPPC4-212ENST00000533058 NFKBIAP25963 317 aa12.98□□□□□ -0.33
TRAPPC4-212ENST00000533058 DEKP35659 375 aaKnown RBP12.98□□□□□ -0.33
TRAPPC4-212ENST00000533058 TNNT3P45378 269 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC4-212ENST00000533058 LIG3P49916 1009 aa12.98□□□□□ -0.33
TRAPPC4-212ENST00000533058 NIPAL4Q0D2K0 466 aa12.98□□□□□ -0.33
TRAPPC4-212ENST00000533058 SIX1Q15475 284 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC4-212ENST00000533058 LRRC73Q5JTD7 316 aa12.98□□□□□ -0.33
TRAPPC4-212ENST00000533058 TMPRSS7Q7RTY8 843 aa12.98□□□□□ -0.33
TRAPPC4-212ENST00000533058 PTAR1Q7Z6K3 402 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC4-212ENST00000533058 EID2Q8N6I1 236 aa12.98□□□□□ -0.33
TRAPPC4-212ENST00000533058 CCDC110Q8TBZ0 833 aa12.98□□□□□ -0.33
TRAPPC4-212ENST00000533058 GATA6Q92908 595 aa12.98□□□□□ -0.33
TRAPPC4-212ENST00000533058 MAGOHBQ96A72 148 aaKnown RBP12.98□□□□□ -0.33
TRAPPC4-212ENST00000533058 CNDP2Q96KP4 475 aaKnown RBP12.98□□□□□ -0.33
TRAPPC4-212ENST00000533058 TEKT5Q96M29 485 aa12.98□□□□□ -0.33
TRAPPC4-212ENST00000533058 TBATAQ96M53 351 aa12.98□□□□□ -0.33
TRAPPC4-212ENST00000533058 SPATA13Q96N96 652 aa12.98□□□□□ -0.33
TRAPPC4-212ENST00000533058 RBM15Q96T37 977 aaKnown RBP eCLIP12.98□□□□□ -0.33
TRAPPC4-212ENST00000533058 WRAP53Q9BUR4 548 aaKnown RBP12.98□□□□□ -0.33
TRAPPC4-212ENST00000533058 KCTD5Q9NXV2 234 aa12.98□□□□□ -0.33
TRAPPC4-212ENST00000533058 TTC7AQ9ULT0 858 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC4-212ENST00000533058 PPIL1Q9Y3C6 166 aa12.98□□□□□ -0.33
TRAPPC4-212ENST00000533058 PCDHGC4Q9Y5F7 938 aa12.98□□□□□ -0.33
TRAPPC4-212ENST00000533058 CSNK1G3Q9Y6M4 447 aa12.98□□□□□ -0.33
TRAPPC4-212ENST00000533058 TMEM8BA6NDV4 472 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 URI1O94763 535 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 TUBB4AP04350 444 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 GIMD1P0DJR0 217 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 C6P13671 934 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 CKMT2P17540 419 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 SPINK2P20155 84 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 STIP1P31948 543 aaKnown RBP12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 IGFALSP35858 605 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 EPHB1P54762 984 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 RALGDSQ12967 914 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 ILKQ13418 452 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 PDE1CQ14123 709 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 PRPSAP1Q14558 356 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 LRRC14Q15048 493 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 PCSK7Q16549 785 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 WSCD2Q2TBF2 565 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 PROX2Q3B8N5 592 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 ANKRD20A2Q5SQ80 823 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 ARMC12Q5T9G4 340 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 ANKRD20A1Q5TYW2 823 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 ANKRD20A3Q5VUR7 823 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 LIPIQ6XZB0 460 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 DPPA4Q7L190 304 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 KDELC2Q7Z4H8 507 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 CBARPQ8N350 705 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 GALNT15Q8N3T1 639 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 TAB3Q8N5C8 712 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 PNPLA1Q8N8W4 532 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 PRELID2Q8N945 189 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 OR4C6Q8NH72 309 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 BTN2A2Q8WVV5 523 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 SLC25A51Q9H1U9 297 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 USP29Q9HBJ7 922 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 MBNL1Q9NR56 388 aaKnown RBP12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 UBP1Q9NZI7 540 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 KLK13Q9UKR3 277 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 PHTF1Q9UMS5 762 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 RAI2Q9Y5P3 530 aa12.97□□□□□ -0.33
TRAPPC4-212ENST00000533058 ARID1BQ8NFD5 2236 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC4-212ENST00000533058 C5orf60A6NFR6 353 aa12.96□□□□□ -0.33
TRAPPC4-212ENST00000533058 H3BM21 787 aa12.96□□□□□ -0.33
TRAPPC4-212ENST00000533058 SCAMP1O15126 338 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms