RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 NUP85Q9BW27 656 aa17.84■□□□□ 0.45
PCF11-206ENST00000533018 CARS2Q9HA77 564 aaKnown RBP17.84■□□□□ 0.45
PCF11-206ENST00000533018 IP6K2Q9UHH9 426 aa17.84■□□□□ 0.45
PCF11-206ENST00000533018 HELZ2Q9BYK8 2649 aaKnown RBP17.84■□□□□ 0.45
PCF11-206ENST00000533018 A0A1W2PQM1 296 aa17.83■□□□□ 0.44
PCF11-206ENST00000533018 PRSS38A1L453 326 aa17.83■□□□□ 0.44
PCF11-206ENST00000533018 D6RAR5 112 aa17.83■□□□□ 0.44
PCF11-206ENST00000533018 PLD2O14939 933 aa17.83■□□□□ 0.44
PCF11-206ENST00000533018 HTRA2O43464 458 aaPredicted RBP17.83■□□□□ 0.44
PCF11-206ENST00000533018 PEX11BO96011 259 aa17.83■□□□□ 0.44
PCF11-206ENST00000533018 SERPING1P05155 500 aa17.83■□□□□ 0.44
PCF11-206ENST00000533018 HOXC4P09017 264 aaPredicted RBP17.83■□□□□ 0.44
PCF11-206ENST00000533018 GLB1P16278 677 aa17.83■□□□□ 0.44
PCF11-206ENST00000533018 MMP13P45452 471 aa17.83■□□□□ 0.44
PCF11-206ENST00000533018 CDH6P55285 790 aa17.83■□□□□ 0.44
PCF11-206ENST00000533018 UBASH3AP57075 661 aa17.83■□□□□ 0.44
PCF11-206ENST00000533018 FANCCQ00597 558 aa17.83■□□□□ 0.44
PCF11-206ENST00000533018 VAC14Q08AM6 782 aa17.83■□□□□ 0.44
PCF11-206ENST00000533018 CNGA3Q16281 694 aa17.83■□□□□ 0.44
PCF11-206ENST00000533018 TSR1Q2NL82 804 aaKnown RBP17.83■□□□□ 0.44
PCF11-206ENST00000533018 ZSCAN23Q3MJ62 389 aa17.83■□□□□ 0.44
PCF11-206ENST00000533018 LSM14AQ8ND56 463 aaKnown RBP17.83■□□□□ 0.44
PCF11-206ENST00000533018 CCL4L1Q8NHW4 92 aa17.83■□□□□ 0.44
PCF11-206ENST00000533018 TEKT4Q8WW24 435 aa17.83■□□□□ 0.44
PCF11-206ENST00000533018 LIN37Q96GY3 246 aaPredicted RBP17.83■□□□□ 0.44
PCF11-206ENST00000533018 COQ10AQ96MF6 247 aa17.83■□□□□ 0.44
PCF11-206ENST00000533018 TMEM74Q96NL1 305 aa17.83■□□□□ 0.44
PCF11-206ENST00000533018 PCDH18Q9HCL0 1135 aa17.83■□□□□ 0.44
PCF11-206ENST00000533018 PHPT1Q9NRX4 125 aaPredicted RBP17.83■□□□□ 0.44
PCF11-206ENST00000533018 LRIT1Q9P2V4 623 aa17.83■□□□□ 0.44
PCF11-206ENST00000533018 ATXN7L1Q9ULK2 861 aaPredicted RBP17.83■□□□□ 0.44
PCF11-206ENST00000533018 PHTF1Q9UMS5 762 aa17.83■□□□□ 0.44
PCF11-206ENST00000533018 SYCE3A1L190 88 aa17.82■□□□□ 0.44
PCF11-206ENST00000533018 CDRT15L2A8MXV6 281 aa17.82■□□□□ 0.44
PCF11-206ENST00000533018 ERVH48-1M5A8F1 160 aa17.82■□□□□ 0.44
PCF11-206ENST00000533018 MYO1FO00160 1098 aa17.82■□□□□ 0.44
PCF11-206ENST00000533018 HEXIM1O94992 359 aaKnown RBP17.82■□□□□ 0.44
PCF11-206ENST00000533018 ITGA2BP08514 1039 aa17.82■□□□□ 0.44
PCF11-206ENST00000533018 JMJD7P0C870 316 aa17.82■□□□□ 0.44
PCF11-206ENST00000533018 MYCLP1P12525 358 aaPredicted RBP17.82■□□□□ 0.44
PCF11-206ENST00000533018 HGFP14210 728 aa17.82■□□□□ 0.44
PCF11-206ENST00000533018 GJC1P36383 396 aa17.82■□□□□ 0.44
PCF11-206ENST00000533018 ETV3P41162 512 aa17.82■□□□□ 0.44
PCF11-206ENST00000533018 RHDQ02161 417 aa17.82■□□□□ 0.44
PCF11-206ENST00000533018 TRAF2Q12933 501 aa17.82■□□□□ 0.44
PCF11-206ENST00000533018 C14orf28Q4W4Y0 310 aa17.82■□□□□ 0.44
PCF11-206ENST00000533018 CCDC122Q5T0U0 273 aa17.82■□□□□ 0.44
PCF11-206ENST00000533018 ARMC12Q5T9G4 340 aa17.82■□□□□ 0.44
PCF11-206ENST00000533018 HGSNATQ68CP4 663 aa17.82■□□□□ 0.44
PCF11-206ENST00000533018 SPECC1LQ69YQ0 1117 aa17.82■□□□□ 0.44
PCF11-206ENST00000533018 RAET1GQ6H3X3 334 aa17.82■□□□□ 0.44
PCF11-206ENST00000533018 LUZP1Q86V48 1076 aa17.82■□□□□ 0.44
PCF11-206ENST00000533018 HEATR4Q86WZ0 1026 aa17.82■□□□□ 0.44
PCF11-206ENST00000533018 SFTPA2Q8IWL1 248 aa17.82■□□□□ 0.44
PCF11-206ENST00000533018 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.82■□□□□ 0.44
PCF11-206ENST00000533018 KIAA1524Q8TCG1 905 aa17.82■□□□□ 0.44
PCF11-206ENST00000533018 MGME1Q9BQP7 344 aa17.82■□□□□ 0.44
PCF11-206ENST00000533018 NT5MQ9NPB1 228 aa17.82■□□□□ 0.44
PCF11-206ENST00000533018 KCTD5Q9NXV2 234 aa17.82■□□□□ 0.44
PCF11-206ENST00000533018 APPL1Q9UKG1 709 aa17.82■□□□□ 0.44
PCF11-206ENST00000533018 RNF215Q9Y6U7 377 aa17.82■□□□□ 0.44
PCF11-206ENST00000533018 CFAP46Q8IYW2 2715 aa17.82■□□□□ 0.44
PCF11-206ENST00000533018 A0A1W2PQJ5 194 aa17.81■□□□□ 0.44
PCF11-206ENST00000533018 NPIPB15A6NHN6 443 aaPredicted RBP17.81■□□□□ 0.44
PCF11-206ENST00000533018 KRT10P13645 584 aa17.81■□□□□ 0.44
PCF11-206ENST00000533018 CTPS1P17812 591 aa17.81■□□□□ 0.44
PCF11-206ENST00000533018 CR2P20023 1033 aa17.81■□□□□ 0.44
PCF11-206ENST00000533018 UGT1A5P35504 534 aa17.81■□□□□ 0.44
PCF11-206ENST00000533018 MLLT3P42568 568 aaPredicted RBP17.81■□□□□ 0.44
PCF11-206ENST00000533018 GNPDA1P46926 289 aa17.81■□□□□ 0.44
PCF11-206ENST00000533018 SLC25A11Q02978 314 aaKnown RBP17.81■□□□□ 0.44
PCF11-206ENST00000533018 ILF3Q12906 894 aaKnown RBP eCLIP17.81■□□□□ 0.44
PCF11-206ENST00000533018 EIF3IQ13347 325 aaKnown RBP17.81■□□□□ 0.44
PCF11-206ENST00000533018 BIRC2Q13490 618 aa17.81■□□□□ 0.44
PCF11-206ENST00000533018 HADHQ16836 314 aaKnown RBP17.81■□□□□ 0.44
PCF11-206ENST00000533018 CERCAMQ5T4B2 595 aa17.81■□□□□ 0.44
PCF11-206ENST00000533018 OGFOD3Q6PK18 319 aa17.81■□□□□ 0.44
PCF11-206ENST00000533018 CCDC81Q6ZN84 652 aa17.81■□□□□ 0.44
PCF11-206ENST00000533018 USP45Q70EL2 814 aa17.81■□□□□ 0.44
PCF11-206ENST00000533018 HSD11B1LQ7Z5J1 315 aa17.81■□□□□ 0.44
PCF11-206ENST00000533018 CLEC14AQ86T13 490 aa17.81■□□□□ 0.44
PCF11-206ENST00000533018 NDUFAF2Q8N183 169 aa17.81■□□□□ 0.44
PCF11-206ENST00000533018 NIPA2Q8N8Q9 360 aa17.81■□□□□ 0.44
PCF11-206ENST00000533018 SYN2Q92777 582 aaPredicted RBP17.81■□□□□ 0.44
PCF11-206ENST00000533018 CBX8Q9HC52 389 aa17.81■□□□□ 0.44
PCF11-206ENST00000533018 PISDQ9UG56 409 aa17.81■□□□□ 0.44
PCF11-206ENST00000533018 TTLL3Q9Y4R7 772 aa17.81■□□□□ 0.44
PCF11-206ENST00000533018 PIEZO2Q9H5I5 2752 aa17.8■□□□□ 0.44
PCF11-206ENST00000533018 A0A087X0T9 212 aa17.8■□□□□ 0.44
PCF11-206ENST00000533018 GOLGA6L19H0YKK7 550 aa17.8■□□□□ 0.44
PCF11-206ENST00000533018 NOBOXO60393 691 aa17.8■□□□□ 0.44
PCF11-206ENST00000533018 C1QL1O75973 258 aa17.8■□□□□ 0.44
PCF11-206ENST00000533018 PGLSO95336 258 aa17.8■□□□□ 0.44
PCF11-206ENST00000533018 FAM228BP0C875 321 aa17.8■□□□□ 0.44
PCF11-206ENST00000533018 CCNB1P14635 433 aa17.8■□□□□ 0.44
PCF11-206ENST00000533018 LHCGRP22888 699 aa17.8■□□□□ 0.44
PCF11-206ENST00000533018 SLC5A2P31639 672 aa17.8■□□□□ 0.44
PCF11-206ENST00000533018 EPHB1P54762 984 aa17.8■□□□□ 0.44
PCF11-206ENST00000533018 ZBED6P86452 979 aa17.8■□□□□ 0.44
PCF11-206ENST00000533018 CFHR1Q03591 330 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms