RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 FPGTO14772 594 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 TTI1O43156 1089 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 EPN2O95208 641 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 CRTAMO95727 393 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 CTAGE8P0CG41 777 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 TPH1P17752 444 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 TPSB2P20231 275 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 HOXD12P35452 270 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 STC1P52823 247 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 RACK1P63244 317 aaKnown RBP11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 CDH17Q12864 832 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 FGL2Q14314 439 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 AGERQ15109 404 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 TEAD4Q15561 434 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 TPSAB1Q15661 275 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 DUOXA1Q1HG43 343 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 DENND5AQ6IQ26 1287 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 Q6ZVL8 140 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 LYSMD3Q7Z3D4 306 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 HSD11B1LQ7Z5J1 315 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 RABEPKQ7Z6M1 372 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 CTAGE6Q86UF2 777 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 JAMLQ86YT9 394 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 CTAGE4Q8IX94 777 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 NRSN1Q8IZ57 195 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 CEP112Q8N8E3 955 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 DENND6BQ8NEG7 585 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 OR52K1Q8NGK4 314 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 FAM174AQ8TBP5 190 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 CENPTQ96BT3 561 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 COQ10AQ96MF6 247 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 ORAI3Q9BRQ5 295 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 TM9SF3Q9HD45 589 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 AASDHPPTQ9NRN7 309 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 RAD18Q9NS91 495 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 TMEM74BQ9NUR3 256 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 PKD2L2Q9NZM6 624 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 NCDNQ9UBB6 729 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 SPO11Q9Y5K1 396 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 AURKAO14965 403 aa11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 RAD51BO15315 384 aa11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 MAGEC1O60732 1142 aa11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 CD38P28907 300 aa11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 HMGCLP35914 325 aa11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 MPLP40238 635 aa11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 ETV3P41162 512 aa11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 GRIA1P42261 906 aa11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 MAGEA6P43360 314 aa11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 NPY2RP49146 381 aa11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 SPINT3P49223 89 aa11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 AFF3P51826 1226 aaKnown RBP11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 PDE1BQ01064 536 aa11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 KCNJ11Q14654 390 aa11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 TAF1AQ15573 450 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 WSCD2Q2TBF2 565 aa11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 ZDHHC20Q5W0Z9 365 aa11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 GLT6D1Q7Z4J2 308 aa11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 TECPR1Q7Z6L1 1165 aa11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 NLRP8Q86W28 1048 aa11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 PPIL6Q8IXY8 311 aa11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 ZCCHC9Q8N567 271 aaKnown RBP11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 MFSD2AQ8NA29 543 aa11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 TMEM145Q8NBT3 493 aa11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 C1orf216Q8TAB5 229 aa11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 CPT1BQ92523 772 aa11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 NUS1Q96E22 293 aa11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 DTD2Q96FN9 168 aa11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 BMFQ96LC9 184 aa11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 SLC6A18Q96N87 628 aa11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 KLF6Q99612 283 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 MYOCQ99972 504 aa11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 FZD3Q9NPG1 666 aa11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 CASS4Q9NQ75 786 aa11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 PKP3Q9Y446 797 aa11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 ATXN2Q99700 1313 aaKnown RBP11.23□□□□□ -0.61
TRAPPC4-211ENST00000533012 TCRBV7S3A2A0A539 114 aa11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 EFCAB8A8MWE9 144 aa11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 DNALI1O14645 258 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 NDC80O14777 642 aa11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 KHNYNO15037 678 aaKnown RBP11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 STX7O15400 261 aaKnown RBP11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 RAD51CO43502 376 aa11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 SLU7O95391 586 aaKnown RBP11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 SLC4A1P02730 911 aa11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 C1SP09871 688 aa11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 GM2AP17900 193 aa11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 LPOP22079 712 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 C21orf59P57076 290 aa11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 CLDN2P57739 230 aa11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 MRPS25P82663 173 aaKnown RBP11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 OVGP1Q12889 678 aa11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 MSLNQ13421 630 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 LAMB3Q13751 1172 aa11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 PEAR1Q5VY43 1037 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 LRRC8BQ6P9F7 803 aa11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 RFLNAQ6ZTI6 216 aa11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 ZNF765Q7L2R6 523 aa11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 TTC30BQ8N4P2 665 aa11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 TP53I13Q8NBR0 393 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 BBOF1Q8ND07 529 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms