RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 APOA4P06727 396 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 GNA15P30679 374 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 HTR2BP41595 481 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 SESN2P58004 480 aaPredicted RBP6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 TAP1Q03518 808 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 CDK18Q07002 472 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 BNIP2Q12982 314 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 PIGHQ14442 188 aaPredicted RBP6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 RBM20Q5T481 1227 aaKnown RBP6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 GARNL3Q5VVW2 1013 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 OR6B2Q6IFH4 312 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 KLHL17Q6TDP4 642 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 MFSD7Q6UXD7 560 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 RAB44Q7Z6P3 723 aaPredicted RBP6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 SLC47A2Q86VL8 602 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 ACSF2Q96CM8 615 aaPredicted RBP6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 SEPHS2Q99611 448 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 C17orf75Q9HAS0 396 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 SPAG4Q9NPE6 437 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 DNAJC28Q9NX36 388 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 ING3Q9NXR8 418 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 IFT80Q9P2H3 777 aaPredicted RBP6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 LTBP1Q14766 1721 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 MOXD2PA6NHM9 499 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 H0Y858 1186 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 H0YJX3 145 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 PRRG1O14668 218 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 TRDMT1O14717 391 aaKnown RBP6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 TGFB1I1O43294 461 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 ALX3O95076 343 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 CYP1A2P05177 515 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 LCP1P13796 627 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 C4BPBP20851 252 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 RAD51Q06609 339 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 PPP3CAQ08209 521 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 EPS8Q12929 822 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 IMPG1Q17R60 797 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 CBWD6Q4V339 395 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 BOLA3Q53S33 107 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 CBWD3Q5JTY5 395 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 CBWD5Q5RIA9 395 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 SNAP47Q5SQN1 464 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 RHBDF2Q6PJF5 856 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 KATNAL2Q8IYT4 538 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 SPARTQ8N0X7 666 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 CADM3Q8N126 398 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 DEPDC4Q8N2C3 294 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 NATD1Q8N6N6 113 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 LEMD2Q8NC56 503 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 ABHD11Q8NFV4 315 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 CCDC106Q9BWC9 280 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 MROQ9BYG7 248 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 VTI1BQ9UEU0 232 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 VANGL2Q9ULK5 521 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 LAMA2P24043 3122 aaKnown RBP6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 SLC22A1O15245 554 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 HDAC3O15379 428 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 EXTL3O43909 919 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 MOCS2O96007 188 aaPredicted RBP6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 FGBP02675 491 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 NTRK1P04629 796 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 ALDH2P05091 517 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 CAPGP40121 348 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 OPRL1P41146 370 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 GABRB2P47870 512 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 PRMT2P55345 433 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 YWHAEP62258 255 aaKnown RBP6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 FASTKQ14296 549 aaKnown RBP6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 ZNF267Q14586 743 aaPredicted RBP6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 BCL2A1Q16548 175 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 CCDC58Q4VC31 144 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 FAM209AQ5JX71 171 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 FAXCQ5TGI0 409 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 CYP20A1Q6UW02 462 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 ELMO1Q92556 727 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 SERAC1Q96JX3 654 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 TUBA1CQ9BQE3 449 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 SLC25A23Q9BV35 468 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 COG4Q9H9E3 785 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 LRRC4Q9HBW1 653 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 EML4Q9HC35 981 aaKnown RBP6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 NUMBLQ9Y6R0 609 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 MYH15Q9Y2K3 1946 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 FADS2P1A8MWK0 482 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 M0QYV0 167 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 UBDO15205 165 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 PAPSS1O43252 624 aaPredicted RBP6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 FAM189A1O60320 539 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 GNRH1P01148 92 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 MAPTP10636 758 aaKnown RBP6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 PCNAP12004 261 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 ALDH4A1P30038 563 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 SLC7A1P30825 629 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 CTNNB1P35222 781 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 CRYBB1P53674 252 aaPredicted RBP6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 CDH6P55285 790 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 ENPEPQ07075 957 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 SLC13A2Q13183 592 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 LRRC26Q2I0M4 334 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms