RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 DDX49Q9Y6V7 483 aaKnown RBP7.44□□□□□ -1.22
CSDE1-213ENST00000530784 UMODL1Q5DID0 1318 aa7.44□□□□□ -1.22
CSDE1-213ENST00000530784 EYSQ5T1H1 3165 aa7.44□□□□□ -1.22
CSDE1-213ENST00000530784 A0A0C4DFX4 3053 aa7.43□□□□□ -1.22
CSDE1-213ENST00000530784 ZNFX1Q9P2E3 1918 aaKnown RBP7.43□□□□□ -1.22
CSDE1-213ENST00000530784 LOC102724159A0A0B4J2E5 919 aa7.43□□□□□ -1.22
CSDE1-213ENST00000530784 FOXO6A8MYZ6 492 aa7.43□□□□□ -1.22
CSDE1-213ENST00000530784 MSI1O43347 362 aaKnown RBP7.43□□□□□ -1.22
CSDE1-213ENST00000530784 CSTBP04080 98 aaKnown RBP7.43□□□□□ -1.22
CSDE1-213ENST00000530784 SUPT20HL2P0C7V6 817 aa7.43□□□□□ -1.22
CSDE1-213ENST00000530784 TOP1P11387 765 aaKnown RBP7.43□□□□□ -1.22
CSDE1-213ENST00000530784 ITGB6P18564 788 aa7.43□□□□□ -1.22
CSDE1-213ENST00000530784 SLC16A2P36021 539 aa7.43□□□□□ -1.22
CSDE1-213ENST00000530784 NOVP48745 357 aa7.43□□□□□ -1.22
CSDE1-213ENST00000530784 POLE2P56282 527 aa7.43□□□□□ -1.22
CSDE1-213ENST00000530784 BAATQ14032 418 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-213ENST00000530784 GALNT3Q14435 633 aa7.43□□□□□ -1.22
CSDE1-213ENST00000530784 PWP2Q15269 919 aaKnown RBP7.43□□□□□ -1.22
CSDE1-213ENST00000530784 GALNTL6Q49A17 601 aa7.43□□□□□ -1.22
CSDE1-213ENST00000530784 DUSP28Q4G0W2 176 aa7.43□□□□□ -1.22
CSDE1-213ENST00000530784 TTC22Q5TAA0 569 aa7.43□□□□□ -1.22
CSDE1-213ENST00000530784 HMBOX1Q6NT76 420 aa7.43□□□□□ -1.22
CSDE1-213ENST00000530784 MYLK4Q86YV6 388 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-213ENST00000530784 SAMD14Q8IZD0 417 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-213ENST00000530784 MORC4Q8TE76 937 aa7.43□□□□□ -1.22
CSDE1-213ENST00000530784 TMEM174Q8WUU8 243 aa7.43□□□□□ -1.22
CSDE1-213ENST00000530784 ALDH8A1Q9H2A2 487 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-213ENST00000530784 FZD3Q9NPG1 666 aa7.43□□□□□ -1.22
CSDE1-213ENST00000530784 THEGQ9P2T0 379 aa7.43□□□□□ -1.22
CSDE1-213ENST00000530784 PNMA2Q9UL42 364 aa7.43□□□□□ -1.22
CSDE1-213ENST00000530784 C19orf53Q9UNZ5 99 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-213ENST00000530784 GRIN2DO15399 1336 aa7.43□□□□□ -1.22
CSDE1-213ENST00000530784 RAD50Q92878 1312 aa7.43□□□□□ -1.22
CSDE1-213ENST00000530784 A0A0D9SFI3 127 aa7.42□□□□□ -1.22
CSDE1-213ENST00000530784 KCNJ18B7U540 433 aa7.42□□□□□ -1.22
CSDE1-213ENST00000530784 PROB1E7EW31 1015 aa7.42□□□□□ -1.22
CSDE1-213ENST00000530784 NEURL1O76050 574 aa7.42□□□□□ -1.22
CSDE1-213ENST00000530784 CALML3P27482 149 aa7.42□□□□□ -1.22
CSDE1-213ENST00000530784 PTGR1Q14914 329 aa7.42□□□□□ -1.22
CSDE1-213ENST00000530784 PPP2R5BQ15173 497 aa7.42□□□□□ -1.22
CSDE1-213ENST00000530784 RPS6KA2Q15349 733 aa7.42□□□□□ -1.22
CSDE1-213ENST00000530784 ALX1Q15699 326 aa7.42□□□□□ -1.22
CSDE1-213ENST00000530784 TBRG1Q3YBR2 411 aa7.42□□□□□ -1.22
CSDE1-213ENST00000530784 MCMDC2Q4G0Z9 681 aa7.42□□□□□ -1.22
CSDE1-213ENST00000530784 ANKRD45Q5TZF3 282 aa7.42□□□□□ -1.22
CSDE1-213ENST00000530784 ERAP2Q6P179 960 aa7.42□□□□□ -1.22
CSDE1-213ENST00000530784 C9orf47Q6ZRZ4 202 aa7.42□□□□□ -1.22
CSDE1-213ENST00000530784 PELI3Q8N2H9 469 aa7.42□□□□□ -1.22
CSDE1-213ENST00000530784 OR6J1Q8NGC5 347 aa7.42□□□□□ -1.22
CSDE1-213ENST00000530784 STT3BQ8TCJ2 826 aa7.42□□□□□ -1.22
CSDE1-213ENST00000530784 CENPIQ92674 756 aaPredicted RBP7.42□□□□□ -1.22
CSDE1-213ENST00000530784 NPAS1Q99742 590 aa7.42□□□□□ -1.22
CSDE1-213ENST00000530784 TMEM47Q9BQJ4 181 aa7.42□□□□□ -1.22
CSDE1-213ENST00000530784 MTG1Q9BT17 334 aaPredicted RBP7.42□□□□□ -1.22
CSDE1-213ENST00000530784 DTX4Q9Y2E6 619 aa7.42□□□□□ -1.22
CSDE1-213ENST00000530784 CDH23Q9H251 3354 aa7.42□□□□□ -1.22
CSDE1-213ENST00000530784 ZMYM6O95789 1325 aa7.42□□□□□ -1.22
CSDE1-213ENST00000530784 B4DLN1 442 aa7.41□□□□□ -1.22
CSDE1-213ENST00000530784 PDHBP11177 359 aa7.41□□□□□ -1.22
CSDE1-213ENST00000530784 PCP11498 1178 aaKnown RBP7.41□□□□□ -1.22
CSDE1-213ENST00000530784 MRPL12P52815 198 aaKnown RBP7.41□□□□□ -1.22
CSDE1-213ENST00000530784 RRP1P56182 461 aaKnown RBP7.41□□□□□ -1.22
CSDE1-213ENST00000530784 HAND2P61296 217 aa7.41□□□□□ -1.22
CSDE1-213ENST00000530784 PMPCAQ10713 525 aa7.41□□□□□ -1.22
CSDE1-213ENST00000530784 DAB2IPQ5VWQ8 1189 aa7.41□□□□□ -1.22
CSDE1-213ENST00000530784 ZNF549Q6P9A3 640 aa7.41□□□□□ -1.22
CSDE1-213ENST00000530784 ZNF517Q6ZMY9 492 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-213ENST00000530784 TMEM200AQ86VY9 491 aa7.41□□□□□ -1.22
CSDE1-213ENST00000530784 TICAM2Q86XR7 235 aa7.41□□□□□ -1.22
CSDE1-213ENST00000530784 CACNA2D3Q8IZS8 1091 aa7.41□□□□□ -1.22
CSDE1-213ENST00000530784 FAM110DQ8TAY7 271 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-213ENST00000530784 SCFD2Q8WU76 684 aa7.41□□□□□ -1.22
CSDE1-213ENST00000530784 CPT1BQ92523 772 aa7.41□□□□□ -1.22
CSDE1-213ENST00000530784 C3orf49Q96BT1 292 aa7.41□□□□□ -1.22
CSDE1-213ENST00000530784 KRTAP9-8Q9BYQ0 159 aa7.41□□□□□ -1.22
CSDE1-213ENST00000530784 RNF41Q9H4P4 317 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-213ENST00000530784 TCP11L1Q9NUJ3 509 aa7.41□□□□□ -1.22
CSDE1-213ENST00000530784 RCE1Q9Y256 329 aa7.41□□□□□ -1.22
CSDE1-213ENST00000530784 WDR19Q8NEZ3 1342 aa7.41□□□□□ -1.22
CSDE1-213ENST00000530784 SMCHD1A6NHR9 2005 aa7.4□□□□□ -1.22
CSDE1-213ENST00000530784 ALPLP05186 524 aa7.4□□□□□ -1.22
CSDE1-213ENST00000530784 CYP21A2P08686 494 aa7.4□□□□□ -1.22
CSDE1-213ENST00000530784 HSPD1P10809 573 aaKnown RBP7.4□□□□□ -1.22
CSDE1-213ENST00000530784 ACTN1P12814 892 aa7.4□□□□□ -1.22
CSDE1-213ENST00000530784 RFC2P35250 354 aa7.4□□□□□ -1.22
CSDE1-213ENST00000530784 POLD2P49005 469 aa7.4□□□□□ -1.22
CSDE1-213ENST00000530784 RPS6P62753 249 aaKnown RBP7.4□□□□□ -1.22
CSDE1-213ENST00000530784 MRPS5P82675 430 aaKnown RBP7.4□□□□□ -1.22
CSDE1-213ENST00000530784 ZBTB16Q05516 673 aa7.4□□□□□ -1.22
CSDE1-213ENST00000530784 BLMHQ13867 455 aa7.4□□□□□ -1.22
CSDE1-213ENST00000530784 TRIM14Q14142 442 aa7.4□□□□□ -1.22
CSDE1-213ENST00000530784 USH1GQ495M9 461 aa7.4□□□□□ -1.22
CSDE1-213ENST00000530784 CCDC38Q502W7 563 aa7.4□□□□□ -1.22
CSDE1-213ENST00000530784 MFSD6Q6ZSS7 791 aa7.4□□□□□ -1.22
CSDE1-213ENST00000530784 RRAGAQ7L523 313 aa7.4□□□□□ -1.22
CSDE1-213ENST00000530784 TRAPPC11Q7Z392 1133 aa7.4□□□□□ -1.22
CSDE1-213ENST00000530784 DEFB128Q7Z7B8 93 aa7.4□□□□□ -1.22
CSDE1-213ENST00000530784 ZNF589Q86UQ0 364 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-213ENST00000530784 GPSM1Q86YR5 675 aa7.4□□□□□ -1.22
CSDE1-213ENST00000530784 KLBQ86Z14 1044 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms