RNA–Protein interactions for RNA: ENST00000529469.1

SOX6-212, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-212ENST00000529469 ZBTB11O95625 1053 aaPredicted RBP4.39□□□□□ -1.71
SOX6-212ENST00000529469 AFPP02771 609 aaKnown RBP4.39□□□□□ -1.71
SOX6-212ENST00000529469 ITGB6P18564 788 aa4.39□□□□□ -1.71
SOX6-212ENST00000529469 MAOAP21397 527 aa4.39□□□□□ -1.71
SOX6-212ENST00000529469 STX2P32856 288 aa4.39□□□□□ -1.71
SOX6-212ENST00000529469 MAN1A1P33908 653 aa4.39□□□□□ -1.71
SOX6-212ENST00000529469 F2RL1P55085 397 aa4.39□□□□□ -1.71
SOX6-212ENST00000529469 BRWD1-AS2P59051 145 aa4.39□□□□□ -1.71
SOX6-212ENST00000529469 DDX10Q13206 875 aaKnown RBP4.39□□□□□ -1.71
SOX6-212ENST00000529469 FRG1Q14331 258 aaKnown RBP4.39□□□□□ -1.71
SOX6-212ENST00000529469 AMZ1Q400G9 498 aa4.39□□□□□ -1.71
SOX6-212ENST00000529469 C6orf141Q5SZD1 244 aa4.39□□□□□ -1.71
SOX6-212ENST00000529469 C9orf57Q5W0N0 161 aa4.39□□□□□ -1.71
SOX6-212ENST00000529469 RUSC1-AS1Q66K80 236 aa4.39□□□□□ -1.71
SOX6-212ENST00000529469 RHBDF2Q6PJF5 856 aa4.39□□□□□ -1.71
SOX6-212ENST00000529469 DSTYKQ6XUX3 929 aa4.39□□□□□ -1.71
SOX6-212ENST00000529469 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.39□□□□□ -1.71
SOX6-212ENST00000529469 TMTC3Q6ZXV5 915 aa4.39□□□□□ -1.71
SOX6-212ENST00000529469 MAATS1Q7Z4T9 603 aa4.39□□□□□ -1.71
SOX6-212ENST00000529469 CCDC13Q8IYE1 715 aa4.39□□□□□ -1.71
SOX6-212ENST00000529469 DSELQ8IZU8 1212 aa4.39□□□□□ -1.71
SOX6-212ENST00000529469 TMEM116Q8NCL8 245 aa4.39□□□□□ -1.71
SOX6-212ENST00000529469 MMABQ96EY8 250 aaPredicted RBP4.39□□□□□ -1.71
SOX6-212ENST00000529469 SCMH1Q96GD3 660 aa4.39□□□□□ -1.71
SOX6-212ENST00000529469 MEIS3Q99687 375 aa4.39□□□□□ -1.71
SOX6-212ENST00000529469 PPP1R3EQ9H7J1 279 aa4.39□□□□□ -1.71
SOX6-212ENST00000529469 HINT3Q9NQE9 182 aaKnown RBP4.39□□□□□ -1.71
SOX6-212ENST00000529469 ZNF580Q9UK33 172 aa4.39□□□□□ -1.71
SOX6-212ENST00000529469 ERVK-11Q9UQG0 969 aa4.39□□□□□ -1.71
SOX6-212ENST00000529469 CEPT1Q9Y6K0 416 aa4.39□□□□□ -1.71
SOX6-212ENST00000529469 PIAS3Q9Y6X2 628 aa4.39□□□□□ -1.71
SOX6-212ENST00000529469 IGLV5-37A0A075B6J1 123 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 VCYO14598 125 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 NKX2-2O95096 273 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 KRT10P13645 584 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 DDIT3P35638 169 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 METAP2P50579 478 aaKnown RBP eCLIP4.38□□□□□ -1.71
SOX6-212ENST00000529469 ART1P52961 327 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 TUBA1BP68363 451 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 KRT32Q14532 448 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 CCNG2Q16589 344 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 USP41Q3LFD5 358 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 FAAH2Q6GMR7 532 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 PLEKHA7Q6IQ23 1121 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 WDR73Q6P4I2 378 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 CYP20A1Q6UW02 462 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 PQLC2Q6ZP29 291 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 RSRC2Q7L4I2 434 aaKnown RBP4.38□□□□□ -1.71
SOX6-212ENST00000529469 TAOK1Q7L7X3 1001 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 C16orf82Q7Z2V1 217 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 ARMC9Q7Z3E5 817 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 PXKQ7Z7A4 578 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 WDR63Q8IWG1 891 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 ADHFE1Q8IWW8 467 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 SPATA6LQ8N4H0 392 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 OR2AK2Q8NG84 335 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 SMARCE1Q969G3 411 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 FAM149B1Q96BN6 582 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 RTP4Q96DX8 246 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 PPP1R13BQ96KQ4 1090 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 WDFY2Q96P53 400 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 KXD1Q9BQD3 176 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 KRTAP9-8Q9BYQ0 159 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 NDST4Q9H3R1 872 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 C6orf106Q9H6K1 298 aaPredicted RBP4.38□□□□□ -1.71
SOX6-212ENST00000529469 GAREM1Q9H706 876 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 POLR1BQ9H9Y6 1135 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 C17orf75Q9HAS0 396 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 MMP25Q9NPA2 562 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 OLA1Q9NTK5 396 aaKnown RBP4.38□□□□□ -1.71
SOX6-212ENST00000529469 TERF2IPQ9NYB0 399 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 C1RLQ9NZP8 487 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 LIMA1Q9UHB6 759 aaKnown RBP4.38□□□□□ -1.71
SOX6-212ENST00000529469 SNX9Q9Y5X1 595 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 KCNE2Q9Y6J6 123 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 SCN5AQ14524 2016 aa4.38□□□□□ -1.71
SOX6-212ENST00000529469 GAGE7O76087 117 aa4.37□□□□□ -1.71
SOX6-212ENST00000529469 KDM4BO94953 1096 aa4.37□□□□□ -1.71
SOX6-212ENST00000529469 GAGE12FP0CL80 117 aa4.37□□□□□ -1.71
SOX6-212ENST00000529469 GAGE12GP0CL81 117 aa4.37□□□□□ -1.71
SOX6-212ENST00000529469 GAGE12IP0CL82 117 aa4.37□□□□□ -1.71
SOX6-212ENST00000529469 HSPA1AP0DMV8 641 aaKnown RBP4.37□□□□□ -1.71
SOX6-212ENST00000529469 HSPA1BP0DMV9 641 aaKnown RBP4.37□□□□□ -1.71
SOX6-212ENST00000529469 DLG1Q12959 904 aa4.37□□□□□ -1.71
SOX6-212ENST00000529469 GAGE1Q13065 139 aa4.37□□□□□ -1.71
SOX6-212ENST00000529469 GAGE4Q13068 117 aa4.37□□□□□ -1.71
SOX6-212ENST00000529469 OLIG2Q13516 323 aa4.37□□□□□ -1.71
SOX6-212ENST00000529469 ASIC2Q16515 512 aa4.37□□□□□ -1.71
SOX6-212ENST00000529469 IZUMO4Q1ZYL8 232 aa4.37□□□□□ -1.71
SOX6-212ENST00000529469 DPCR1Q3MIW9 517 aa4.37□□□□□ -1.71
SOX6-212ENST00000529469 ATP13A5Q4VNC0 1218 aa4.37□□□□□ -1.71
SOX6-212ENST00000529469 PRSS57Q6UWY2 283 aa4.37□□□□□ -1.71
SOX6-212ENST00000529469 SLC36A4Q6YBV0 504 aa4.37□□□□□ -1.71
SOX6-212ENST00000529469 LILRB1Q8NHL6 650 aaPredicted RBP4.37□□□□□ -1.71
SOX6-212ENST00000529469 MTBPQ96DY7 904 aa4.37□□□□□ -1.71
SOX6-212ENST00000529469 NAF1Q96HR8 494 aaKnown RBP4.37□□□□□ -1.71
SOX6-212ENST00000529469 ADGRG7Q96K78 797 aa4.37□□□□□ -1.71
SOX6-212ENST00000529469 TMEM47Q9BQJ4 181 aa4.37□□□□□ -1.71
SOX6-212ENST00000529469 IFIH1Q9BYX4 1025 aaKnown RBP4.37□□□□□ -1.71
SOX6-212ENST00000529469 SLC28A3Q9HAS3 691 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms