RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 SCUBE1Q8IWY4 988 aa15.08■□□□□ 0.01
USP47-207ENST00000527733 BPIFB1Q8TDL5 484 aa15.08■□□□□ 0.01
USP47-207ENST00000527733 EME1Q96AY2 570 aa15.08■□□□□ 0.01
USP47-207ENST00000527733 SH3GL2Q99962 352 aa15.08■□□□□ 0.01
USP47-207ENST00000527733 MYOCQ99972 504 aa15.08■□□□□ 0.01
USP47-207ENST00000527733 NMUR1Q9HB89 426 aa15.08■□□□□ 0.01
USP47-207ENST00000527733 PNMA8BQ9ULN7 279 aaPredicted RBP15.08■□□□□ 0.01
USP47-207ENST00000527733 CNTN5O94779 1100 aa15.08■□□□□ 0
USP47-207ENST00000527733 MPP1Q00013 466 aa15.08■□□□□ 0
USP47-207ENST00000527733 CNTN1Q12860 1018 aa15.08■□□□□ 0
USP47-207ENST00000527733 FBXW10Q5XX13 1052 aa15.08■□□□□ 0
USP47-207ENST00000527733 PDE12Q6L8Q7 609 aaKnown RBP15.08■□□□□ 0
USP47-207ENST00000527733 LDB1Q86U70 411 aaPredicted RBP15.08■□□□□ 0
USP47-207ENST00000527733 FAM124AQ86V42 546 aa15.08■□□□□ 0
USP47-207ENST00000527733 TRIML2Q8N7C3 387 aa15.08■□□□□ 0
USP47-207ENST00000527733 SELENOMQ8WWX9 145 aa15.08■□□□□ 0
USP47-207ENST00000527733 SLC40A1Q9NP59 571 aa15.08■□□□□ 0
USP47-207ENST00000527733 COL4A1P02462 1669 aa15.08■□□□□ 0
USP47-207ENST00000527733 SYNDIG1LA6NDD5 238 aa15.08■□□□□ 0
USP47-207ENST00000527733 TMEM189-UBE2V1I3L0A0 370 aa15.08■□□□□ 0
USP47-207ENST00000527733 HDAC3O15379 428 aa15.08■□□□□ 0
USP47-207ENST00000527733 SNAP91O60641 907 aa15.08■□□□□ 0
USP47-207ENST00000527733 BPGMP07738 259 aa15.08■□□□□ 0
USP47-207ENST00000527733 BMPR1AP36894 532 aa15.08■□□□□ 0
USP47-207ENST00000527733 ANXA11P50995 505 aaKnown RBP15.08■□□□□ 0
USP47-207ENST00000527733 ABRQ12979 859 aa15.08■□□□□ 0
USP47-207ENST00000527733 CBX2Q14781 532 aaPredicted RBP15.08■□□□□ 0
USP47-207ENST00000527733 PDGFRLQ15198 375 aa15.08■□□□□ 0
USP47-207ENST00000527733 TAF1AQ15573 450 aaPredicted RBP15.08■□□□□ 0
USP47-207ENST00000527733 TRIP10Q15642 601 aa15.08■□□□□ 0
USP47-207ENST00000527733 CARD16Q5EG05 197 aa15.08■□□□□ 0
USP47-207ENST00000527733 TMPRSS6Q8IU80 811 aa15.08■□□□□ 0
USP47-207ENST00000527733 FAM126BQ8IXS8 530 aa15.08■□□□□ 0
USP47-207ENST00000527733 OSCP1Q8WVF1 389 aa15.08■□□□□ 0
USP47-207ENST00000527733 TRMOQ9BU70 441 aa15.08■□□□□ 0
USP47-207ENST00000527733 AASDHPPTQ9NRN7 309 aa15.08■□□□□ 0
USP47-207ENST00000527733 KCTD5Q9NXV2 234 aa15.08■□□□□ 0
USP47-207ENST00000527733 GPSM3Q9Y4H4 160 aa15.08■□□□□ 0
USP47-207ENST00000527733 KIAA1551Q9HCM1 1747 aa15.08■□□□□ 0
USP47-207ENST00000527733 DNAJC8O75937 253 aaPredicted RBP15.07■□□□□ 0
USP47-207ENST00000527733 SLC35G4P0C7Q5 338 aa15.07■□□□□ 0
USP47-207ENST00000527733 LBPP18428 481 aa15.07■□□□□ 0
USP47-207ENST00000527733 CCND1P24385 295 aa15.07■□□□□ 0
USP47-207ENST00000527733 RAB33AQ14088 237 aa15.07■□□□□ 0
USP47-207ENST00000527733 TRMT10BQ6PF06 316 aaKnown RBP15.07■□□□□ 0
USP47-207ENST00000527733 MTSS1LQ765P7 747 aa15.07■□□□□ 0
USP47-207ENST00000527733 C10orf107Q8IVU9 208 aa15.07■□□□□ 0
USP47-207ENST00000527733 MIER2Q8N344 545 aa15.07■□□□□ 0
USP47-207ENST00000527733 GLIS1Q8NBF1 620 aa15.07■□□□□ 0
USP47-207ENST00000527733 SLCO1B3Q9NPD5 702 aa15.07■□□□□ 0
USP47-207ENST00000527733 FETUBQ9UGM5 382 aa15.07■□□□□ 0
USP47-207ENST00000527733 LRRTM3Q86VH5 581 aa15.07■□□□□ 0
USP47-207ENST00000527733 RAVER1Q8IY67 606 aaKnown RBP15.07■□□□□ 0
USP47-207ENST00000527733 ST13P4Q8IZP2 240 aaPredicted RBP15.07■□□□□ 0
USP47-207ENST00000527733 UBE2E3Q969T4 207 aa15.07■□□□□ 0
USP47-207ENST00000527733 NRBF2Q96F24 287 aa15.07■□□□□ 0
USP47-207ENST00000527733 CEP295NLQ96MC4 621 aa15.07■□□□□ 0
USP47-207ENST00000527733 HERC2P3Q9BVR0 1158 aa15.07■□□□□ 0
USP47-207ENST00000527733 ARMCX1Q9P291 453 aa15.07■□□□□ 0
USP47-207ENST00000527733 FKBPLQ9UIM3 349 aa15.07■□□□□ 0
USP47-207ENST00000527733 ZNF840PA6NDX5 716 aa15.07■□□□□ 0
USP47-207ENST00000527733 GJB5O95377 273 aa15.07■□□□□ 0
USP47-207ENST00000527733 GOT2P00505 430 aaKnown RBP15.07■□□□□ 0
USP47-207ENST00000527733 ADH5P11766 374 aa15.07■□□□□ 0
USP47-207ENST00000527733 WASHC5Q12768 1159 aa15.07■□□□□ 0
USP47-207ENST00000527733 TMLHEQ9NVH6 421 aa15.07■□□□□ 0
USP47-207ENST00000527733 NDUFAF1Q9Y375 327 aa15.07■□□□□ 0
USP47-207ENST00000527733 TCRBV7S3A2A0A539 114 aa15.07■□□□□ 0
USP47-207ENST00000527733 GRIA1P42261 906 aa15.07■□□□□ 0
USP47-207ENST00000527733 CDC16Q13042 620 aa15.07■□□□□ 0
USP47-207ENST00000527733 C14orf80Q86SX3 495 aa15.07■□□□□ 0
USP47-207ENST00000527733 CAMK1DQ8IU85 385 aa15.07■□□□□ 0
USP47-207ENST00000527733 SH3BP4Q9P0V3 963 aa15.07■□□□□ 0
USP47-207ENST00000527733 MAFFQ9ULX9 164 aa15.07■□□□□ 0
USP47-207ENST00000527733 SNX6Q9UNH7 406 aa15.07■□□□□ 0
USP47-207ENST00000527733 SORCS3Q9UPU3 1222 aa15.07■□□□□ 0
USP47-207ENST00000527733 WNT6Q9Y6F9 365 aa15.07■□□□□ 0
USP47-207ENST00000527733 LEFTY2O00292 366 aa15.06■□□□□ 0
USP47-207ENST00000527733 HNRNPA1P09651 372 aaKnown RBP eCLIP15.06■□□□□ 0
USP47-207ENST00000527733 SH3BGRP55822 239 aaPredicted RBP15.06■□□□□ 0
USP47-207ENST00000527733 KLF1Q13351 362 aaPredicted RBP15.06■□□□□ 0
USP47-207ENST00000527733 FSTL4Q6MZW2 842 aa15.06■□□□□ 0
USP47-207ENST00000527733 FAM171BQ6P995 826 aa15.06■□□□□ 0
USP47-207ENST00000527733 SLC22A17Q8WUG5 538 aa15.06■□□□□ 0
USP47-207ENST00000527733 SPOCK2Q92563 424 aa15.06■□□□□ 0
USP47-207ENST00000527733 CXorf40BQ96DE9 158 aa15.06■□□□□ 0
USP47-207ENST00000527733 SLC25A23Q9BV35 468 aa15.06■□□□□ 0
USP47-207ENST00000527733 MECRQ9BV79 373 aa15.06■□□□□ 0
USP47-207ENST00000527733 SUV39H2Q9H5I1 410 aa15.06■□□□□ 0
USP47-207ENST00000527733 SAR1AQ9NR31 198 aa15.06■□□□□ 0
USP47-207ENST00000527733 ASF1AQ9Y294 204 aa15.06■□□□□ 0
USP47-207ENST00000527733 TAF1LQ8IZX4 1826 aa15.06■□□□□ 0
USP47-207ENST00000527733 ULK1O75385 1050 aa15.06■□□□□ 0
USP47-207ENST00000527733 CPSF4O95639 269 aaKnown RBP15.06■□□□□ 0
USP47-207ENST00000527733 OTCP00480 354 aa15.06■□□□□ 0
USP47-207ENST00000527733 RB1P06400 928 aa15.06■□□□□ 0
USP47-207ENST00000527733 OGNP20774 298 aaKnown RBP15.06■□□□□ 0
USP47-207ENST00000527733 AFF1P51825 1210 aaKnown RBP15.06■□□□□ 0
USP47-207ENST00000527733 DMC1Q14565 340 aa15.06■□□□□ 0
USP47-207ENST00000527733 KCNJ11Q14654 390 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms