RNA–Protein interactions for RNA: ENST00000525116.5

CASP4-205, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-205ENST00000525116 SPO11Q9Y5K1 396 aa7.11□□□□□ -1.27
CASP4-205ENST00000525116 SCDO00767 359 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 KLK10O43240 276 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 STX10O60499 249 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 USP12O75317 370 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 MOCS3O95396 460 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 CALCAP01258 141 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 IGLV3-27P01718 113 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 RNASE1P07998 156 aaKnown RBP7.1□□□□□ -1.27
CASP4-205ENST00000525116 SRPRAP08240 638 aaKnown RBP7.1□□□□□ -1.27
CASP4-205ENST00000525116 ZSCAN22P10073 491 aaPredicted RBP7.1□□□□□ -1.27
CASP4-205ENST00000525116 PFKFB1P16118 471 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 C5AR1P21730 350 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 ACP1P24666 158 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 ITGB7P26010 798 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 GTF2H1P32780 548 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 TRHRP34981 398 aaPredicted RBP7.1□□□□□ -1.27
CASP4-205ENST00000525116 EPHB1P54762 984 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 NUCB2P80303 420 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 E2F1Q01094 437 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 CUL2Q13617 745 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 KIR3DS1Q14943 382 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 DCAF17Q5H9S7 520 aaPredicted RBP7.1□□□□□ -1.27
CASP4-205ENST00000525116 MS4A13Q5J8X5 152 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 SFMBT2Q5VUG0 894 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 BROXQ5VW32 411 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 TCERG1LQ5VWI1 586 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 PMF1Q6P1K2 205 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 MSANTD2Q6P1R3 559 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 KRBA2Q6ZNG9 492 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 KANSL1Q7Z3B3 1105 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 LGI2Q8N0V4 545 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 SLC25A45Q8N413 288 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 ZNF557Q8N988 423 aaPredicted RBP7.1□□□□□ -1.27
CASP4-205ENST00000525116 ZNF248Q8NDW4 579 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 ABHD4Q8TB40 342 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 COG1Q8WTW3 980 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 KLK6Q92876 244 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 CCDC47Q96A33 483 aaKnown RBP7.1□□□□□ -1.27
CASP4-205ENST00000525116 MYOCQ99972 504 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 DDX50Q9BQ39 737 aaKnown RBP7.1□□□□□ -1.27
CASP4-205ENST00000525116 ASPSCR1Q9BZE9 553 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 CD244Q9BZW8 370 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 SEMA4CQ9C0C4 833 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 ERVMER34-1Q9H9K5 563 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 CNGB3Q9NQW8 809 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 ACSS2Q9NR19 701 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 UCKL1Q9NWZ5 548 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 ARHGAP20Q9P2F6 1191 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 CYTH4Q9UIA0 394 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 CTNND2Q9UQB3 1225 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 NAALADL1Q9UQQ1 740 aa7.1□□□□□ -1.27
CASP4-205ENST00000525116 PTPRQQ9UMZ3 2332 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 M0QYV0 167 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 O00370 1275 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 SLC31A1O15431 190 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 LUC7L3O95232 432 aaKnown RBP7.09□□□□□ -1.27
CASP4-205ENST00000525116 LTFP02788 710 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 SETSIPP0DME0 302 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 VDRP11473 427 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 PDGFRAP16234 1089 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 PRLRP16471 622 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 ZNF18P17022 549 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 DRD3P35462 400 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 NNMTP40261 264 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 TMPRSS3P57727 454 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 CNTN1Q12860 1018 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 NFIL3Q16649 462 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 ACCSLQ4AC99 568 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 CBWD6Q4V339 395 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 HS1BP3Q53T59 392 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 ZNF542PQ5EBM4 170 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 CBWD3Q5JTY5 395 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 CBWD5Q5RIA9 395 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 RAP1GAP2Q684P5 730 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 PAQR3Q6TCH7 311 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.09□□□□□ -1.27
CASP4-205ENST00000525116 CIR1Q86X95 450 aaPredicted RBP7.09□□□□□ -1.27
CASP4-205ENST00000525116 KDM1BQ8NB78 822 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 DQX1Q8TE96 717 aaKnown RBP7.09□□□□□ -1.27
CASP4-205ENST00000525116 KCNE4Q8WWG9 221 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 RFFLQ8WZ73 363 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 IRGQQ8WZA9 623 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 TFAP2BQ92481 460 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 AZIN2Q96A70 460 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 ZNF578Q96N58 590 aaPredicted RBP7.09□□□□□ -1.27
CASP4-205ENST00000525116 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.09□□□□□ -1.27
CASP4-205ENST00000525116 MENTQ9BUN1 341 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 ABCG4Q9H172 646 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 H2AFY2Q9P0M6 372 aaPredicted RBP7.09□□□□□ -1.27
CASP4-205ENST00000525116 XPO7Q9UIA9 1087 aaKnown RBP7.09□□□□□ -1.27
CASP4-205ENST00000525116 TRHDEQ9UKU6 1024 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 SARDHQ9UL12 918 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 CFAP45Q9UL16 551 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 SPEF1Q9Y4P9 236 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 KNTC1P50748 2209 aa7.09□□□□□ -1.27
CASP4-205ENST00000525116 MYO18BQ8IUG5 2567 aa7.09□□□□□ -1.28
CASP4-205ENST00000525116 ITIH6Q6UXX5 1313 aa7.08□□□□□ -1.28
CASP4-205ENST00000525116 HECTD1Q9ULT8 2610 aa7.08□□□□□ -1.28
CASP4-205ENST00000525116 A0A1B0GVM2 712 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms