RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 USP9XQ93008 2570 aaPredicted RBP13.84□□□□□ -0.19
CSTF3-206ENST00000524827 TEX15Q9BXT5 2789 aa13.84□□□□□ -0.19
CSTF3-206ENST00000524827 SIGLEC16A6NMB1 481 aa13.84□□□□□ -0.19
CSTF3-206ENST00000524827 ZW10O43264 779 aa13.84□□□□□ -0.19
CSTF3-206ENST00000524827 FUCA1P04066 466 aa13.84□□□□□ -0.19
CSTF3-206ENST00000524827 CALB1P05937 261 aa13.84□□□□□ -0.19
CSTF3-206ENST00000524827 CEACAM5P06731 702 aa13.84□□□□□ -0.19
CSTF3-206ENST00000524827 AK4P27144 223 aaPredicted RBP13.84□□□□□ -0.19
CSTF3-206ENST00000524827 CSF2RBP32927 897 aa13.84□□□□□ -0.19
CSTF3-206ENST00000524827 SOX5P35711 763 aa13.84□□□□□ -0.19
CSTF3-206ENST00000524827 CASRP41180 1078 aa13.84□□□□□ -0.19
CSTF3-206ENST00000524827 GPR3P46089 330 aa13.84□□□□□ -0.19
CSTF3-206ENST00000524827 CCR10P46092 362 aa13.84□□□□□ -0.19
CSTF3-206ENST00000524827 GNPDA1P46926 289 aa13.84□□□□□ -0.19
CSTF3-206ENST00000524827 KLK7P49862 253 aa13.84□□□□□ -0.19
CSTF3-206ENST00000524827 PAPOLAP51003 745 aaKnown RBP13.84□□□□□ -0.19
CSTF3-206ENST00000524827 ZNF143P52747 638 aaPredicted RBP13.84□□□□□ -0.19
CSTF3-206ENST00000524827 NDST2P52849 883 aa13.84□□□□□ -0.19
CSTF3-206ENST00000524827 AIF1P55008 147 aa13.84□□□□□ -0.19
CSTF3-206ENST00000524827 BCL2L1Q07817 233 aa13.84□□□□□ -0.19
CSTF3-206ENST00000524827 BIRC2Q13490 618 aa13.84□□□□□ -0.19
CSTF3-206ENST00000524827 IGFBP7Q16270 282 aa13.84□□□□□ -0.19
CSTF3-206ENST00000524827 NKAIN2Q5VXU1 208 aa13.84□□□□□ -0.19
CSTF3-206ENST00000524827 SLC30A9Q6PML9 568 aa13.84□□□□□ -0.19
CSTF3-206ENST00000524827 HEATR4Q86WZ0 1026 aa13.84□□□□□ -0.19
CSTF3-206ENST00000524827 PHF13Q86YI8 300 aaPredicted RBP13.84□□□□□ -0.19
CSTF3-206ENST00000524827 CACNA2D3Q8IZS8 1091 aa13.84□□□□□ -0.19
CSTF3-206ENST00000524827 AGBL5Q8NDL9 886 aa13.84□□□□□ -0.19
CSTF3-206ENST00000524827 CCDC112Q8NEF3 446 aa13.84□□□□□ -0.19
CSTF3-206ENST00000524827 OR4D9Q8NGE8 314 aa13.84□□□□□ -0.19
CSTF3-206ENST00000524827 NUS1Q96E22 293 aa13.84□□□□□ -0.19
CSTF3-206ENST00000524827 COQ10AQ96MF6 247 aa13.84□□□□□ -0.19
CSTF3-206ENST00000524827 NSMCE3Q96MG7 304 aa13.84□□□□□ -0.19
CSTF3-206ENST00000524827 FRMD8Q9BZ67 464 aaPredicted RBP13.84□□□□□ -0.19
CSTF3-206ENST00000524827 SLC39A8Q9C0K1 460 aa13.84□□□□□ -0.19
CSTF3-206ENST00000524827 PHPT1Q9NRX4 125 aaPredicted RBP13.84□□□□□ -0.19
CSTF3-206ENST00000524827 GPATCH2LQ9NWQ4 482 aa13.84□□□□□ -0.19
CSTF3-206ENST00000524827 TRNAU1APQ9NX07 287 aaKnown RBP13.84□□□□□ -0.19
CSTF3-206ENST00000524827 SLC39A1Q9NY26 324 aa13.84□□□□□ -0.19
CSTF3-206ENST00000524827 B4GALT6Q9UBX8 382 aa13.84□□□□□ -0.19
CSTF3-206ENST00000524827 SPTBN1Q01082 2364 aaKnown RBP13.83□□□□□ -0.19
CSTF3-206ENST00000524827 TCRBV5S1A1TA0A578 114 aa13.83□□□□□ -0.2
CSTF3-206ENST00000524827 CLEC18AA5D8T8 446 aa13.83□□□□□ -0.2
CSTF3-206ENST00000524827 ARHGAP42A6NI28 874 aa13.83□□□□□ -0.2
CSTF3-206ENST00000524827 ZNF891A8MT65 544 aaPredicted RBP13.83□□□□□ -0.2
CSTF3-206ENST00000524827 TRAFD1O14545 582 aaPredicted RBP13.83□□□□□ -0.2
CSTF3-206ENST00000524827 RAD1O60671 282 aa13.83□□□□□ -0.2
CSTF3-206ENST00000524827 PALMO75781 387 aa13.83□□□□□ -0.2
CSTF3-206ENST00000524827 THRAP10827 490 aa13.83□□□□□ -0.2
CSTF3-206ENST00000524827 GP1BBP13224 206 aa13.83□□□□□ -0.2
CSTF3-206ENST00000524827 CR2P20023 1033 aa13.83□□□□□ -0.2
CSTF3-206ENST00000524827 CSTF2P33240 577 aaKnown RBP eCLIP13.83□□□□□ -0.22e-6■■■□□ 15.1
CSTF3-206ENST00000524827 HTR7P34969 479 aa13.83□□□□□ -0.2
CSTF3-206ENST00000524827 JAM2P57087 298 aa13.83□□□□□ -0.2
CSTF3-206ENST00000524827 POLR2FP61218 127 aaKnown RBP13.83□□□□□ -0.2
CSTF3-206ENST00000524827 POLR2LP62875 67 aaKnown RBP13.83□□□□□ -0.2
CSTF3-206ENST00000524827 BECN1Q14457 450 aa13.83□□□□□ -0.2
CSTF3-206ENST00000524827 CLEC16AQ2KHT3 1053 aa13.83□□□□□ -0.2
CSTF3-206ENST00000524827 DPCR1Q3MIW9 517 aa13.83□□□□□ -0.2
CSTF3-206ENST00000524827 DNAJC24Q6P3W2 148 aa13.83□□□□□ -0.2
CSTF3-206ENST00000524827 CLEC18BQ6UXF7 455 aa13.83□□□□□ -0.2
CSTF3-206ENST00000524827 NAGSQ8N159 534 aa13.83□□□□□ -0.2
CSTF3-206ENST00000524827 CLEC18CQ8NCF0 446 aa13.83□□□□□ -0.2
CSTF3-206ENST00000524827 PTCD2Q8WV60 388 aaKnown RBP13.83□□□□□ -0.2
CSTF3-206ENST00000524827 CATSPER2Q96P56 530 aa13.83□□□□□ -0.2
CSTF3-206ENST00000524827 MCEEQ96PE7 176 aa13.83□□□□□ -0.2
CSTF3-206ENST00000524827 CNPY3Q9BT09 278 aa13.83□□□□□ -0.2
CSTF3-206ENST00000524827 CINPQ9BW66 212 aaPredicted RBP13.83□□□□□ -0.2
CSTF3-206ENST00000524827 TEX101Q9BY14 249 aa13.83□□□□□ -0.2
CSTF3-206ENST00000524827 NLRC4Q9NPP4 1024 aa13.83□□□□□ -0.2
CSTF3-206ENST00000524827 SAMSN1Q9NSI8 373 aaKnown RBP13.83□□□□□ -0.2
CSTF3-206ENST00000524827 TAB2Q9NYJ8 693 aa13.83□□□□□ -0.2
CSTF3-206ENST00000524827 TMEM9Q9P0T7 183 aa13.83□□□□□ -0.2
CSTF3-206ENST00000524827 ANAPC2Q9UJX6 822 aa13.83□□□□□ -0.2
CSTF3-206ENST00000524827 ST14Q9Y5Y6 855 aa13.83□□□□□ -0.2
CSTF3-206ENST00000524827 NOTCH2Q04721 2471 aa13.83□□□□□ -0.2
CSTF3-206ENST00000524827 IGHV1OR21-1A0A087WYE8 117 aa13.82□□□□□ -0.2
CSTF3-206ENST00000524827 ANKRD62A6NC57 917 aa13.82□□□□□ -0.2
CSTF3-206ENST00000524827 B4E171 279 aa13.82□□□□□ -0.2
CSTF3-206ENST00000524827 EPHB6O15197 1021 aa13.82□□□□□ -0.2
CSTF3-206ENST00000524827 PPM1DO15297 605 aa13.82□□□□□ -0.2
CSTF3-206ENST00000524827 MPSTP25325 297 aa13.82□□□□□ -0.2
CSTF3-206ENST00000524827 ERCC5P28715 1186 aaPredicted RBP13.82□□□□□ -0.2
CSTF3-206ENST00000524827 TSPAN7P41732 249 aa13.82□□□□□ -0.2
CSTF3-206ENST00000524827 RPL7AP62424 266 aaKnown RBP13.82□□□□□ -0.2
CSTF3-206ENST00000524827 CTBSQ01459 385 aa13.82□□□□□ -0.2
CSTF3-206ENST00000524827 SQSTM1Q13501 440 aa13.82□□□□□ -0.2
CSTF3-206ENST00000524827 CNGA3Q16281 694 aa13.82□□□□□ -0.2
CSTF3-206ENST00000524827 TCP11X2Q5H9J9 407 aa13.82□□□□□ -0.2
CSTF3-206ENST00000524827 ARHGAP36Q6ZRI8 547 aa13.82□□□□□ -0.2
CSTF3-206ENST00000524827 MON1BQ7L1V2 547 aa13.82□□□□□ -0.2
CSTF3-206ENST00000524827 FAM129CQ86XR2 697 aa13.82□□□□□ -0.2
CSTF3-206ENST00000524827 ARHGAP12Q8IWW6 846 aa13.82□□□□□ -0.2
CSTF3-206ENST00000524827 C9orf43Q8TAL5 461 aaPredicted RBP13.82□□□□□ -0.2
CSTF3-206ENST00000524827 SLC45A3Q96JT2 553 aa13.82□□□□□ -0.2
CSTF3-206ENST00000524827 ASPSCR1Q9BZE9 553 aa13.82□□□□□ -0.2
CSTF3-206ENST00000524827 VPS16Q9H269 839 aa13.82□□□□□ -0.2
CSTF3-206ENST00000524827 SP110Q9HB58 689 aa13.82□□□□□ -0.2
CSTF3-206ENST00000524827 FAM207AQ9NSI2 230 aaPredicted RBP13.82□□□□□ -0.2
CSTF3-206ENST00000524827 OCIAD1Q9NX40 245 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms