RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 CEACAM1P13688 526 aa12.53□□□□□ -0.4
CCNC-216ENST00000523961 GM2AP17900 193 aa12.53□□□□□ -0.4
CCNC-216ENST00000523961 EPHA8P29322 1005 aaPredicted RBP12.53□□□□□ -0.4
CCNC-216ENST00000523961 GEMP55040 296 aa12.53□□□□□ -0.4
CCNC-216ENST00000523961 WNT3AP56704 352 aa12.53□□□□□ -0.4
CCNC-216ENST00000523961 IL9RQ01113 521 aa12.53□□□□□ -0.4
CCNC-216ENST00000523961 MPP3Q13368 585 aa12.53□□□□□ -0.4
CCNC-216ENST00000523961 PDE1CQ14123 709 aaPredicted RBP12.53□□□□□ -0.4
CCNC-216ENST00000523961 FZD2Q14332 565 aa12.53□□□□□ -0.4
CCNC-216ENST00000523961 GALNT3Q14435 633 aa12.53□□□□□ -0.4
CCNC-216ENST00000523961 PRPSAP1Q14558 356 aa12.53□□□□□ -0.4
CCNC-216ENST00000523961 INPP5AQ14642 412 aa12.53□□□□□ -0.4
CCNC-216ENST00000523961 PTPRRQ15256 657 aa12.53□□□□□ -0.4
CCNC-216ENST00000523961 SHBQ15464 509 aa12.53□□□□□ -0.4
CCNC-216ENST00000523961 INAVAQ3KP66 663 aa12.53□□□□□ -0.4
CCNC-216ENST00000523961 ZNF569Q5MCW4 686 aa12.53□□□□□ -0.4
CCNC-216ENST00000523961 ESRP1Q6NXG1 681 aaKnown RBP12.53□□□□□ -0.4
CCNC-216ENST00000523961 KDELC1Q6UW63 502 aa12.53□□□□□ -0.4
CCNC-216ENST00000523961 Q6ZVL8 140 aa12.53□□□□□ -0.4
CCNC-216ENST00000523961 KDELC2Q7Z4H8 507 aa12.53□□□□□ -0.4
CCNC-216ENST00000523961 HSD11B1LQ7Z5J1 315 aa12.53□□□□□ -0.4
CCNC-216ENST00000523961 PARGQ86W56 976 aa12.53□□□□□ -0.4
CCNC-216ENST00000523961 NAXDQ8IW45 347 aa12.53□□□□□ -0.4
CCNC-216ENST00000523961 RAVER1Q8IY67 606 aaKnown RBP12.53□□□□□ -0.4
CCNC-216ENST00000523961 MAIP1Q8WWC4 291 aa12.53□□□□□ -0.4
CCNC-216ENST00000523961 DTD2Q96FN9 168 aa12.53□□□□□ -0.4
CCNC-216ENST00000523961 OXNAD1Q96HP4 312 aaPredicted RBP12.53□□□□□ -0.4
CCNC-216ENST00000523961 PPP1R2P1Q96PQ5 205 aa12.53□□□□□ -0.4
CCNC-216ENST00000523961 SMIM14Q96QK8 99 aa12.53□□□□□ -0.4
CCNC-216ENST00000523961 SRPK1Q96SB4 655 aaKnown RBP12.53□□□□□ -0.4
CCNC-216ENST00000523961 APOOQ9BUR5 198 aa12.53□□□□□ -0.4
CCNC-216ENST00000523961 C1orf232A0A0U1RR37 186 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 LOC285095A0A1B0GVY8 99 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 C5orf60A6NFR6 353 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 GOLGA8CPA6NN73 597 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 F5H423 210 aaPredicted RBP12.52□□□□□ -0.41
CCNC-216ENST00000523961 LIASO43766 372 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 CEP104O60308 925 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 KCNK5O95279 499 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 CLDN7O95471 211 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 TSHRP16473 764 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 HTR1BP28222 390 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 STIP1P31948 543 aaKnown RBP12.52□□□□□ -0.41
CCNC-216ENST00000523961 ETV3P41162 512 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 GRK6P43250 576 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 NOVA1P51513 510 aaKnown RBP12.52□□□□□ -0.41
CCNC-216ENST00000523961 STC1P52823 247 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 HNRNPKP61978 463 aaKnown RBP eCLIP12.52□□□□□ -0.41
CCNC-216ENST00000523961 PTSQ03393 145 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 PNCKQ6P2M8 343 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 KDM7AQ6ZMT4 941 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 MACC1Q6ZN28 852 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 ERMP1Q7Z2K6 904 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 TECPR1Q7Z6L1 1165 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 FAM71DQ8N9W8 422 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 PLA2G15Q8NCC3 412 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 DEFB124Q8NES8 71 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 ATL2Q8NHH9 583 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 CCDC110Q8TBZ0 833 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 CCHCR1Q8TD31 782 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 SAP25Q8TEE9 199 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 SETD7Q8WTS6 366 aaKnown RBP12.52□□□□□ -0.41
CCNC-216ENST00000523961 ATG4AQ8WYN0 398 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 DCBLD2Q96PD2 775 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 TMEM121Q9BTD3 319 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 FSD1LQ9BXM9 530 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 MAGEE1Q9HCI5 957 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 DNAJC28Q9NX36 388 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 AAR2Q9Y312 384 aaKnown RBP12.52□□□□□ -0.41
CCNC-216ENST00000523961 CNOT1A5YKK6 2376 aaKnown RBP12.52□□□□□ -0.41
CCNC-216ENST00000523961 LRRK1Q38SD2 2015 aa12.52□□□□□ -0.41
CCNC-216ENST00000523961 TMEM131Q92545 1883 aa12.51□□□□□ -0.41
CCNC-216ENST00000523961 A0A0U1RQS6 177 aa12.51□□□□□ -0.41
CCNC-216ENST00000523961 H3BM21 787 aa12.51□□□□□ -0.41
CCNC-216ENST00000523961 CACNB4O00305 520 aaPredicted RBP12.51□□□□□ -0.41
CCNC-216ENST00000523961 ENC1O14682 589 aa12.51□□□□□ -0.41
CCNC-216ENST00000523961 GCATO75600 419 aa12.51□□□□□ -0.41
CCNC-216ENST00000523961 FGGP02679 453 aa12.51□□□□□ -0.41
CCNC-216ENST00000523961 CSF2P04141 144 aa12.51□□□□□ -0.41
CCNC-216ENST00000523961 HOXC4P09017 264 aaPredicted RBP12.51□□□□□ -0.41
CCNC-216ENST00000523961 C1SP09871 688 aa12.51□□□□□ -0.41
CCNC-216ENST00000523961 NME1P15531 152 aaKnown RBP12.51□□□□□ -0.41
CCNC-216ENST00000523961 HLA-DPA1P20036 260 aa12.51□□□□□ -0.41
CCNC-216ENST00000523961 KELP23276 732 aa12.51□□□□□ -0.41
CCNC-216ENST00000523961 PSMB4P28070 264 aa12.51□□□□□ -0.41
CCNC-216ENST00000523961 TEAD1P28347 426 aa12.51□□□□□ -0.41
CCNC-216ENST00000523961 CXCR5P32302 372 aa12.51□□□□□ -0.41
CCNC-216ENST00000523961 TRIM23P36406 574 aa12.51□□□□□ -0.41
CCNC-216ENST00000523961 DPTQ07507 201 aa12.51□□□□□ -0.41
CCNC-216ENST00000523961 BNIP3Q12983 259 aa12.51□□□□□ -0.41
CCNC-216ENST00000523961 NFATC4Q14934 902 aa12.51□□□□□ -0.41
CCNC-216ENST00000523961 OASLQ15646 514 aaKnown RBP12.51□□□□□ -0.41
CCNC-216ENST00000523961 CDKN3Q16667 212 aa12.51□□□□□ -0.41
CCNC-216ENST00000523961 PPM1JQ5JR12 505 aa12.51□□□□□ -0.41
CCNC-216ENST00000523961 TPRG1LQ5T0D9 272 aa12.51□□□□□ -0.41
CCNC-216ENST00000523961 PSAPL1Q6NUJ1 521 aa12.51□□□□□ -0.41
CCNC-216ENST00000523961 ARHGEF18Q6ZSZ5 1173 aa12.51□□□□□ -0.41
CCNC-216ENST00000523961 ZNF765Q7L2R6 523 aa12.51□□□□□ -0.41
CCNC-216ENST00000523961 NLRP8Q86W28 1048 aa12.51□□□□□ -0.41
CCNC-216ENST00000523961 GATAD2AQ86YP4 633 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms