RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 ECEL1O95672 775 aa22.75■■□□□ 1.23
PVT1-218ENST00000523328 CEACAM5P06731 702 aa22.75■■□□□ 1.23
PVT1-218ENST00000523328 EEF1GP26641 437 aaKnown RBP22.75■■□□□ 1.23
PVT1-218ENST00000523328 HTR7P34969 479 aa22.75■■□□□ 1.23
PVT1-218ENST00000523328 UGT1A3P35503 534 aa22.75■■□□□ 1.23
PVT1-218ENST00000523328 LIMK2P53671 638 aa22.75■■□□□ 1.23
PVT1-218ENST00000523328 POLR2LP62875 67 aaKnown RBP22.75■■□□□ 1.23
PVT1-218ENST00000523328 ACOX1Q15067 660 aa22.75■■□□□ 1.23
PVT1-218ENST00000523328 PTRH1Q86Y79 214 aaKnown RBP22.75■■□□□ 1.23
PVT1-218ENST00000523328 PATE1Q8WXA2 126 aa22.75■■□□□ 1.23
PVT1-218ENST00000523328 COQ10AQ96MF6 247 aa22.75■■□□□ 1.23
PVT1-218ENST00000523328 MCEEQ96PE7 176 aa22.75■■□□□ 1.23
PVT1-218ENST00000523328 CNPY3Q9BT09 278 aa22.75■■□□□ 1.23
PVT1-218ENST00000523328 GSDMCQ9BYG8 508 aa22.75■■□□□ 1.23
PVT1-218ENST00000523328 CDH19Q9H159 772 aa22.75■■□□□ 1.23
PVT1-218ENST00000523328 FAM207AQ9NSI2 230 aaPredicted RBP22.75■■□□□ 1.23
PVT1-218ENST00000523328 DONSONQ9NYP3 566 aa22.75■■□□□ 1.23
PVT1-218ENST00000523328 ANKMY1Q9P2S6 941 aa22.75■■□□□ 1.23
PVT1-218ENST00000523328 ST14Q9Y5Y6 855 aa22.75■■□□□ 1.23
PVT1-218ENST00000523328 B3GALT1Q9Y5Z6 326 aa22.75■■□□□ 1.23
PVT1-218ENST00000523328 ARHGAP42A6NI28 874 aa22.74■■□□□ 1.23
PVT1-218ENST00000523328 LIFP15018 202 aa22.74■■□□□ 1.23
PVT1-218ENST00000523328 AK4P27144 223 aaPredicted RBP22.74■■□□□ 1.23
PVT1-218ENST00000523328 GPR3P46089 330 aa22.74■■□□□ 1.23
PVT1-218ENST00000523328 POLE2P56282 527 aa22.74■■□□□ 1.23
PVT1-218ENST00000523328 NSUN2Q08J23 767 aaKnown RBP eCLIP22.74■■□□□ 1.23
PVT1-218ENST00000523328 ILF3Q12906 894 aaKnown RBP eCLIP22.74■■□□□ 1.239e-8■■■□□ 18
PVT1-218ENST00000523328 TRA2AQ13595 282 aaKnown RBP eCLIP22.74■■□□□ 1.23
PVT1-218ENST00000523328 PPP1R15BQ5SWA1 713 aa22.74■■□□□ 1.23
PVT1-218ENST00000523328 DNAJC24Q6P3W2 148 aa22.74■■□□□ 1.23
PVT1-218ENST00000523328 NAGSQ8N159 534 aa22.74■■□□□ 1.23
PVT1-218ENST00000523328 IL22RA1Q8N6P7 574 aa22.74■■□□□ 1.23
PVT1-218ENST00000523328 PTCD2Q8WV60 388 aaKnown RBP22.74■■□□□ 1.23
PVT1-218ENST00000523328 CINPQ9BW66 212 aaPredicted RBP22.74■■□□□ 1.23
PVT1-218ENST00000523328 TEX101Q9BY14 249 aa22.74■■□□□ 1.23
PVT1-218ENST00000523328 FRMD8Q9BZ67 464 aaPredicted RBP22.74■■□□□ 1.23
PVT1-218ENST00000523328 EPN3Q9H201 632 aa22.74■■□□□ 1.23
PVT1-218ENST00000523328 VPS16Q9H269 839 aa22.74■■□□□ 1.23
PVT1-218ENST00000523328 SUDS3Q9H7L9 328 aaPredicted RBP22.74■■□□□ 1.23
PVT1-218ENST00000523328 GPATCH2LQ9NWQ4 482 aa22.74■■□□□ 1.23
PVT1-218ENST00000523328 TRNAU1APQ9NX07 287 aaKnown RBP22.74■■□□□ 1.23
PVT1-218ENST00000523328 B4GALT6Q9UBX8 382 aa22.74■■□□□ 1.23
PVT1-218ENST00000523328 OGDHQ02218 1023 aa22.73■■□□□ 1.23
PVT1-218ENST00000523328 KCNAB2Q13303 367 aa22.73■■□□□ 1.23
PVT1-218ENST00000523328 SKIDA1Q1XH10 827 aa22.73■■□□□ 1.23
PVT1-218ENST00000523328 HEATR4Q86WZ0 1026 aa22.73■■□□□ 1.23
PVT1-218ENST00000523328 ARHGAP12Q8IWW6 846 aa22.73■■□□□ 1.23
PVT1-218ENST00000523328 OR4D9Q8NGE8 314 aa22.73■■□□□ 1.23
PVT1-218ENST00000523328 SPOCK2Q92563 424 aa22.73■■□□□ 1.23
PVT1-218ENST00000523328 NUS1Q96E22 293 aa22.73■■□□□ 1.23
PVT1-218ENST00000523328 PHPT1Q9NRX4 125 aaPredicted RBP22.73■■□□□ 1.23
PVT1-218ENST00000523328 TUBD1Q9UJT1 453 aa22.73■■□□□ 1.23
PVT1-218ENST00000523328 SUFUQ9UMX1 484 aa22.73■■□□□ 1.23
PVT1-218ENST00000523328 PPM1DO15297 605 aa22.72■■□□□ 1.23
PVT1-218ENST00000523328 ZW10O43264 779 aa22.72■■□□□ 1.23
PVT1-218ENST00000523328 THRAP10827 490 aa22.72■■□□□ 1.23
PVT1-218ENST00000523328 CSF2RBP32927 897 aa22.72■■□□□ 1.23
PVT1-218ENST00000523328 SCNN1BP51168 640 aa22.72■■□□□ 1.23
PVT1-218ENST00000523328 SQSTM1Q13501 440 aa22.72■■□□□ 1.23
PVT1-218ENST00000523328 CNGA3Q16281 694 aa22.72■■□□□ 1.23
PVT1-218ENST00000523328 CA9Q16790 459 aa22.72■■□□□ 1.23
PVT1-218ENST00000523328 NKAIN2Q5VXU1 208 aa22.72■■□□□ 1.23
PVT1-218ENST00000523328 SLC30A9Q6PML9 568 aa22.72■■□□□ 1.23
PVT1-218ENST00000523328 ARHGAP36Q6ZRI8 547 aa22.72■■□□□ 1.23
PVT1-218ENST00000523328 PAF1Q8N7H5 531 aa22.72■■□□□ 1.23
PVT1-218ENST00000523328 AGBL5Q8NDL9 886 aa22.72■■□□□ 1.23
PVT1-218ENST00000523328 ART4Q93070 314 aa22.72■■□□□ 1.23
PVT1-218ENST00000523328 DDA1Q9BW61 102 aa22.72■■□□□ 1.23
PVT1-218ENST00000523328 CLSTN2Q9H4D0 955 aa22.72■■□□□ 1.23
PVT1-218ENST00000523328 SEPT3Q9UH03 358 aa22.72■■□□□ 1.23
PVT1-218ENST00000523328 DACH1Q9UI36 760 aa22.72■■□□□ 1.23
PVT1-218ENST00000523328 AP4E1Q9UPM8 1137 aa22.72■■□□□ 1.23
PVT1-218ENST00000523328 IGHV1OR21-1A0A087WYE8 117 aa22.71■■□□□ 1.23
PVT1-218ENST00000523328 ANKRD62A6NC57 917 aa22.71■■□□□ 1.23
PVT1-218ENST00000523328 GNPDA1P46926 289 aa22.71■■□□□ 1.23
PVT1-218ENST00000523328 AP1S1P61966 158 aa22.71■■□□□ 1.23
PVT1-218ENST00000523328 CDK3Q00526 305 aa22.71■■□□□ 1.23
PVT1-218ENST00000523328 UBAP2LQ14157 1087 aaKnown RBP22.71■■□□□ 1.23
PVT1-218ENST00000523328 RFTN1Q14699 578 aaPredicted RBP22.71■■□□□ 1.23
PVT1-218ENST00000523328 CACNA2D3Q8IZS8 1091 aa22.71■■□□□ 1.23
PVT1-218ENST00000523328 CBARPQ8N350 705 aaPredicted RBP22.71■■□□□ 1.23
PVT1-218ENST00000523328 NPWQ8N729 165 aa22.71■■□□□ 1.23
PVT1-218ENST00000523328 SP110Q9HB58 689 aa22.71■■□□□ 1.23
PVT1-218ENST00000523328 TMEM9Q9P0T7 183 aa22.71■■□□□ 1.23
PVT1-218ENST00000523328 SIK3Q9Y2K2 1263 aa22.71■■□□□ 1.23
PVT1-218ENST00000523328 EEF2KO00418 725 aaKnown RBP22.7■■□□□ 1.22
PVT1-218ENST00000523328 MPSTP25325 297 aa22.7■■□□□ 1.22
PVT1-218ENST00000523328 CTBSQ01459 385 aa22.7■■□□□ 1.22
PVT1-218ENST00000523328 IL10RBQ08334 325 aa22.7■■□□□ 1.22
PVT1-218ENST00000523328 CCDC112Q8NEF3 446 aa22.7■■□□□ 1.22
PVT1-218ENST00000523328 DTD2Q96FN9 168 aa22.7■■□□□ 1.22
PVT1-218ENST00000523328 PSKH2Q96QS6 385 aa22.7■■□□□ 1.22
PVT1-218ENST00000523328 OCIAD1Q9NX40 245 aa22.7■■□□□ 1.22
PVT1-218ENST00000523328 TTC24A2A3L6 582 aaPredicted RBP22.69■■□□□ 1.22
PVT1-218ENST00000523328 HTRA2O43464 458 aaPredicted RBP22.69■■□□□ 1.22
PVT1-218ENST00000523328 RAD1O60671 282 aa22.69■■□□□ 1.22
PVT1-218ENST00000523328 HEXIM1O94992 359 aaKnown RBP22.69■■□□□ 1.22
PVT1-218ENST00000523328 ERCC2P18074 760 aa22.69■■□□□ 1.22
PVT1-218ENST00000523328 CSTF2P33240 577 aaKnown RBP eCLIP22.69■■□□□ 1.22
PVT1-218ENST00000523328 CCR10P46092 362 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms