RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 CLEC16AQ2KHT3 1053 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 DEFB133Q30KQ1 61 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 HS1BP3Q53T59 392 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 FKBP15Q5T1M5 1219 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 KIAA1161Q6NSJ0 714 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 CRTC1Q6UUV9 634 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 GDPD4Q6W3E5 623 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 RBM43Q6ZSC3 357 aaKnown RBP8.11□□□□□ -1.11
PVT1-213ENST00000522414 STRADAQ7RTN6 431 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 SLFN11Q7Z7L1 901 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 VPS36Q86VN1 386 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 DNAAF5Q86Y56 855 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 DCP2Q8IU60 420 aaKnown RBP8.11□□□□□ -1.11
PVT1-213ENST00000522414 OR2AP1Q8NGE2 309 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 LMX1AQ8TE12 382 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 TBC1D31Q96DN5 1066 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 LENG8Q96PV6 779 aaPredicted RBP8.11□□□□□ -1.11
PVT1-213ENST00000522414 AGPAT1Q99943 283 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 WRAP53Q9BUR4 548 aaKnown RBP8.11□□□□□ -1.11
PVT1-213ENST00000522414 SELENOOQ9BVL4 669 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 KRTAP4-5Q9BYR2 181 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 ABCG4Q9H172 646 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 PRORYQ9H606 182 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 GPR27Q9NS67 375 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 SEPT11Q9NVA2 429 aaKnown RBP8.11□□□□□ -1.11
PVT1-213ENST00000522414 ACTL7BQ9Y614 415 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 SHROOM3Q8TF72 1996 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 TCRBV5S1A1TA0A578 114 aa8.1□□□□□ -1.11
PVT1-213ENST00000522414 LRRC10BA6NIK2 292 aa8.1□□□□□ -1.11
PVT1-213ENST00000522414 AREL1O15033 823 aa8.1□□□□□ -1.11
PVT1-213ENST00000522414 RRP8O43159 456 aaKnown RBP8.1□□□□□ -1.11
PVT1-213ENST00000522414 CREB3O43889 395 aa8.1□□□□□ -1.11
PVT1-213ENST00000522414 USP12O75317 370 aa8.1□□□□□ -1.11
PVT1-213ENST00000522414 CSO75390 466 aaKnown RBP8.1□□□□□ -1.11
PVT1-213ENST00000522414 TMCC1O94876 653 aa8.1□□□□□ -1.11
PVT1-213ENST00000522414 GSRP00390 522 aa8.1□□□□□ -1.11
PVT1-213ENST00000522414 NME1P15531 152 aaKnown RBP8.1□□□□□ -1.11
PVT1-213ENST00000522414 CDK11BP21127 795 aaKnown RBP8.1□□□□□ -1.11
PVT1-213ENST00000522414 TGM2P21980 687 aa8.1□□□□□ -1.11
PVT1-213ENST00000522414 EPHB2P29323 1055 aa8.1□□□□□ -1.11
PVT1-213ENST00000522414 ABCG1P45844 678 aa8.1□□□□□ -1.11
PVT1-213ENST00000522414 NSFP46459 744 aaKnown RBP8.1□□□□□ -1.11
PVT1-213ENST00000522414 RABIFP47224 123 aa8.1□□□□□ -1.11
PVT1-213ENST00000522414 MAPKAPK2P49137 400 aa8.1□□□□□ -1.11
PVT1-213ENST00000522414 ADKP55263 362 aaKnown RBP8.1□□□□□ -1.11
PVT1-213ENST00000522414 PFN3P60673 137 aa8.1□□□□□ -1.11
PVT1-213ENST00000522414 OGDHQ02218 1023 aa8.1□□□□□ -1.11
PVT1-213ENST00000522414 TCEA2Q15560 299 aa8.1□□□□□ -1.11
PVT1-213ENST00000522414 CDCP2Q5VXM1 449 aa8.1□□□□□ -1.11
PVT1-213ENST00000522414 GUSBP11Q6P575 273 aa8.1□□□□□ -1.11
PVT1-213ENST00000522414 KYAT3Q6YP21 454 aaKnown RBP8.1□□□□□ -1.11
PVT1-213ENST00000522414 TRIM72Q6ZMU5 477 aa8.1□□□□□ -1.11
PVT1-213ENST00000522414 APTXQ7Z2E3 356 aaKnown RBP8.1□□□□□ -1.11
PVT1-213ENST00000522414 PHF13Q86YI8 300 aaPredicted RBP8.1□□□□□ -1.11
PVT1-213ENST00000522414 RBFAQ8N0V3 343 aa8.1□□□□□ -1.11
PVT1-213ENST00000522414 FAM181AQ8N9Y4 354 aa8.1□□□□□ -1.11
PVT1-213ENST00000522414 ZNF548Q8NEK5 533 aaPredicted RBP8.1□□□□□ -1.11
PVT1-213ENST00000522414 NEK11Q8NG66 645 aa8.1□□□□□ -1.11
PVT1-213ENST00000522414 IFI44Q8TCB0 444 aa8.1□□□□□ -1.11
PVT1-213ENST00000522414 HMCESQ96FZ2 354 aa8.1□□□□□ -1.11
PVT1-213ENST00000522414 EXOC2Q96KP1 924 aa8.1□□□□□ -1.11
PVT1-213ENST00000522414 TTYH3Q9C0H2 523 aa8.1□□□□□ -1.11
PVT1-213ENST00000522414 HSD3B7Q9H2F3 369 aa8.1□□□□□ -1.11
PVT1-213ENST00000522414 TAS2R14Q9NYV8 317 aa8.1□□□□□ -1.11
PVT1-213ENST00000522414 NLGN3Q9NZ94 848 aa8.1□□□□□ -1.11
PVT1-213ENST00000522414 LIMA1Q9UHB6 759 aaKnown RBP8.1□□□□□ -1.11
PVT1-213ENST00000522414 DAAM1Q9Y4D1 1078 aa8.1□□□□□ -1.11
PVT1-213ENST00000522414 RP1P56715 2156 aa8.1□□□□□ -1.11
PVT1-213ENST00000522414 A0A1W2PNU3 283 aaPredicted RBP8.09□□□□□ -1.11
PVT1-213ENST00000522414 PMS2P1A4D2B8 440 aa8.09□□□□□ -1.11
PVT1-213ENST00000522414 TMCO5BA8MYB1 307 aa8.09□□□□□ -1.11
PVT1-213ENST00000522414 RASA4BC9J798 803 aa8.09□□□□□ -1.11
PVT1-213ENST00000522414 J3KR12 359 aa8.09□□□□□ -1.11
PVT1-213ENST00000522414 MUSKO15146 869 aa8.09□□□□□ -1.11
PVT1-213ENST00000522414 YY2O15391 372 aa8.09□□□□□ -1.11
PVT1-213ENST00000522414 TEX33O43247 280 aa8.09□□□□□ -1.11
PVT1-213ENST00000522414 CCP110O43303 1012 aa8.09□□□□□ -1.11
PVT1-213ENST00000522414 AQP9O43315 295 aa8.09□□□□□ -1.11
PVT1-213ENST00000522414 RASA4O43374 803 aa8.09□□□□□ -1.11
PVT1-213ENST00000522414 BUB1BO60566 1050 aaPredicted RBP8.09□□□□□ -1.11
PVT1-213ENST00000522414 TM7SF2O76062 418 aa8.09□□□□□ -1.11
PVT1-213ENST00000522414 PIGNO95427 931 aa8.09□□□□□ -1.11
PVT1-213ENST00000522414 PRKCGP05129 697 aa8.09□□□□□ -1.11
PVT1-213ENST00000522414 CTSBP07858 339 aa8.09□□□□□ -1.11
PVT1-213ENST00000522414 TPM2P07951 284 aa8.09□□□□□ -1.11
PVT1-213ENST00000522414 ALPPL2P10696 532 aa8.09□□□□□ -1.11
PVT1-213ENST00000522414 ATP1A3P13637 1013 aa8.09□□□□□ -1.11
PVT1-213ENST00000522414 ACTN2P35609 894 aa8.09□□□□□ -1.11
PVT1-213ENST00000522414 ETFBP38117 255 aa8.09□□□□□ -1.11
PVT1-213ENST00000522414 EIF4A3P38919 411 aaKnown RBP8.09□□□□□ -1.11
PVT1-213ENST00000522414 ZNF143P52747 638 aaPredicted RBP8.09□□□□□ -1.11
PVT1-213ENST00000522414 THOP1P52888 689 aa8.09□□□□□ -1.11
PVT1-213ENST00000522414 GSCP56915 257 aaPredicted RBP8.09□□□□□ -1.11
PVT1-213ENST00000522414 GEMIN4P57678 1058 aaKnown RBP8.09□□□□□ -1.11
PVT1-213ENST00000522414 TLE3Q04726 772 aa8.09□□□□□ -1.11
PVT1-213ENST00000522414 NCAPHQ15003 741 aa8.09□□□□□ -1.11
PVT1-213ENST00000522414 PLCL1Q15111 1095 aa8.09□□□□□ -1.11
PVT1-213ENST00000522414 KLHL40Q2TBA0 621 aa8.09□□□□□ -1.11
PVT1-213ENST00000522414 TBC1D25Q3MII6 688 aa8.09□□□□□ -1.11
PVT1-213ENST00000522414 FAXCQ5TGI0 409 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms