RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 MON1AQ86VX9 555 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 TMEM106CQ9BVX2 250 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 REXO4Q9GZR2 422 aaKnown RBP13.84□□□□□ -0.19
SYNPO-205ENST00000522122 UGT1A7Q9HAW7 530 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 UGT1A10Q9HAW8 530 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 UGT1A8Q9HAW9 530 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 ARHGEF4Q9NR80 690 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 GNPTGQ9UJJ9 305 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 GIT1Q9Y2X7 761 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 SLC22A2O15244 555 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 RNASEH1O60930 286 aaKnown RBP13.84□□□□□ -0.19
SYNPO-205ENST00000522122 IPO13O94829 963 aaKnown RBP13.84□□□□□ -0.19
SYNPO-205ENST00000522122 CKBP12277 381 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 ALOX12P18054 663 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 AOC1P19801 751 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 SEMA5AQ13591 1074 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 TRIM25Q14258 630 aaKnown RBP13.84□□□□□ -0.19
SYNPO-205ENST00000522122 TREML2Q5T2D2 321 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 USP45Q70EL2 814 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 UBR7Q8N806 425 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 MFSD3Q96ES6 412 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 GOLGA2P5Q9HBQ8 144 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 FAM105AQ9NUU6 356 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 COL1A2P08123 1366 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 DARSP14868 501 aaKnown RBP13.84□□□□□ -0.19
SYNPO-205ENST00000522122 TGM3Q08188 693 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 TIMM50Q3ZCQ8 353 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 ZNF549Q6P9A3 640 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 C15orf39Q6ZRI6 1047 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 USP50Q70EL3 339 aaPredicted RBP13.84□□□□□ -0.19
SYNPO-205ENST00000522122 PGAM4Q8N0Y7 254 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 KLHL5Q96PQ7 755 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 LENG8Q96PV6 779 aaPredicted RBP13.84□□□□□ -0.19
SYNPO-205ENST00000522122 BPIFA1Q9NP55 256 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 TBC1D30Q9Y2I9 924 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 IPPQ9Y573 584 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 CYP2A6P11509 494 aaPredicted RBP13.84□□□□□ -0.19
SYNPO-205ENST00000522122 INTS11Q5TA45 600 aaKnown RBP13.84□□□□□ -0.19
SYNPO-205ENST00000522122 VWA5B1Q5TIE3 1220 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 ZYG11AQ6WRX3 759 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 GK5Q6ZS86 529 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 KBTBD2Q8IY47 623 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 FAM47BQ8NA70 645 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 FAM210AQ96ND0 272 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 TUBGCP5Q96RT8 1024 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 SMAD5Q99717 465 aaKnown RBP13.84□□□□□ -0.19
SYNPO-205ENST00000522122 ADAM30Q9UKF2 790 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 POMPQ9Y244 141 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 CXorf49A8MYA2 514 aaPredicted RBP13.83□□□□□ -0.2
SYNPO-205ENST00000522122 PLD1Q13393 1074 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 TSNQ15631 228 aaKnown RBP13.83□□□□□ -0.2
SYNPO-205ENST00000522122 PHKG1Q16816 387 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 TIGD2Q4W5G0 525 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 OTOP3Q7RTS5 596 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 NXNL1Q96CM4 212 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 EXOC2Q96KP1 924 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 HERPUD2Q9BSE4 406 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 TM6SF2Q9BZW4 377 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 RAD21L1Q9H4I0 556 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 PDZD7Q9H5P4 517 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 PLGRKTQ9HBL7 147 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 RPS6KA6Q9UK32 745 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 A0A0J9YYE9 177 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 BBIP1A8MTZ0 92 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 ASNA1O43681 348 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 IL1BP01584 269 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 MAPK8P45983 427 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 PABPC1LQ4VXU2 614 aaKnown RBP13.83□□□□□ -0.2
SYNPO-205ENST00000522122 PCDH19Q8TAB3 1148 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 RNFT2Q96EX2 444 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 ZFP42Q96MM3 310 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 PTTG2Q9NZH5 202 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 SLC22A3O75751 556 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 FSTL1Q12841 308 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 GRM3Q14832 879 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 TAS1R3Q7RTX0 852 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 GPR142Q7Z601 462 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 NDRG1Q92597 394 aaKnown RBP13.83□□□□□ -0.2
SYNPO-205ENST00000522122 SMIM35A0A1B0GVV1 85 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 CST1P01037 141 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 PRKCHP24723 683 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 BRCC3P46736 316 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 POLD2P49005 469 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 DUSP28Q4G0W2 176 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 INTS6LQ5JSJ4 861 aaKnown RBP13.83□□□□□ -0.2
SYNPO-205ENST00000522122 PDZK1Q5T2W1 519 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 SMYD5Q6GMV2 418 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 C10orf53Q8N6V4 93 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 PROX1Q92786 737 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 GATA5Q9BWX5 397 aaPredicted RBP13.83□□□□□ -0.2
SYNPO-205ENST00000522122 NUAK2Q9H093 628 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 PPM1HQ9ULR3 514 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 MAPRE3Q9UPY8 281 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 GMPPBQ9Y5P6 360 aa13.83□□□□□ -0.2
SYNPO-205ENST00000522122 SDHAF4Q5VUM1 108 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 GPR107Q5VW38 600 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 TRMT10BQ6PF06 316 aaKnown RBP13.82□□□□□ -0.2
SYNPO-205ENST00000522122 TIFABQ6ZNK6 161 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 SATL1Q86VE3 508 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 KRT73Q86Y46 540 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms