RNA–Protein interactions for RNA: ENST00000522115.6

PTPN12-215, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 5

Gene PTPN12, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-215	ENST00000522115	MMP25	Q9NPA2	562 aa		4.24	□□□□□ -1.73
PTPN12-215	ENST00000522115	ASAH2	Q9NR71	780 aa		4.24	□□□□□ -1.73
PTPN12-215	ENST00000522115	NAALADL1	Q9UQQ1	740 aa		4.24	□□□□□ -1.73
PTPN12-215	ENST00000522115	NOTCH4	Q99466	2003 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	SAA2-SAA4	A0A096LPE2	208 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115		A6NLC8	198 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	LRRC53	A6NM62	1247 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	AKR1B15	C9JRZ8	316 aa	Predicted RBP	4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	MID1	O15344	667 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	FTCD	O95954	541 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	CYC1	P08574	325 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	F7	P08709	466 aa	Predicted RBP	4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	RRM1	P23921	792 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	MCM3	P25205	808 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	EIF2S3	P41091	472 aa	Known RBP	4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	FASLG	P48023	281 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	CLCNKA	P51800	687 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	HNRNPH2	P55795	449 aa	Known RBP	4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	NEXN	Q0ZGT2	675 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	TROAP	Q12815	778 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	FGFBP1	Q14512	234 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	GGNBP1	Q5YKI7	109 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	UNQ6126/PRO20091	Q6UXV3	157 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	TUBA1A	Q71U36	451 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	HEATR4	Q86WZ0	1026 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	DSEL	Q8IZU8	1212 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	SPATA6L	Q8N4H0	392 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	SPATA3	Q8NHX4	192 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	PABPC5	Q96DU9	382 aa	Known RBP	4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	HES6	Q96HZ4	224 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	LMLN	Q96KR4	655 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	C3orf30	Q96M34	536 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	KXD1	Q9BQD3	176 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	TUBA1C	Q9BQE3	449 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	IFIH1	Q9BYX4	1025 aa	Known RBP	4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	SLC25A18	Q9H1K4	315 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	PREB	Q9HCU5	417 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	HINT3	Q9NQE9	182 aa	Known RBP	4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	TAS2R10	Q9NYW0	307 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	MALT1	Q9UDY8	824 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	RCOR1	Q9UKL0	485 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	ICAM5	Q9UMF0	924 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	ARHGAP26	Q9UNA1	814 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	ERVK-11	Q9UQG0	969 aa		4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	AAR2	Q9Y312	384 aa	Known RBP	4.23	□□□□□ -1.73
PTPN12-215	ENST00000522115	CGNL1	Q0VF96	1302 aa		4.22	□□□□□ -1.73
PTPN12-215	ENST00000522115		A0A1W2PRG0	241 aa		4.22	□□□□□ -1.73
PTPN12-215	ENST00000522115	ZNF587B	E7ETH6	402 aa		4.22	□□□□□ -1.73
PTPN12-215	ENST00000522115	IFNL4	K9M1U5	179 aa		4.22	□□□□□ -1.73
PTPN12-215	ENST00000522115	BUB3	O43684	328 aa		4.22	□□□□□ -1.73
PTPN12-215	ENST00000522115	SEC14L2	O76054	403 aa		4.22	□□□□□ -1.73
PTPN12-215	ENST00000522115	SEC31A	O94979	1220 aa	Known RBP	4.22	□□□□□ -1.73
PTPN12-215	ENST00000522115	AFP	P02771	609 aa	Known RBP	4.22	□□□□□ -1.73
PTPN12-215	ENST00000522115	OLIG2	Q13516	323 aa		4.22	□□□□□ -1.73
PTPN12-215	ENST00000522115	CTF1	Q16619	201 aa		4.22	□□□□□ -1.73
PTPN12-215	ENST00000522115	ALG11	Q2TAA5	492 aa		4.22	□□□□□ -1.73
PTPN12-215	ENST00000522115	FAM76B	Q5HYJ3	339 aa		4.22	□□□□□ -1.73
PTPN12-215	ENST00000522115	PAPPA-AS1	Q5QFB9	102 aa		4.22	□□□□□ -1.73
PTPN12-215	ENST00000522115	FIG4	Q92562	907 aa		4.22	□□□□□ -1.73
PTPN12-215	ENST00000522115	RRP36	Q96EU6	259 aa	Known RBP	4.22	□□□□□ -1.73
PTPN12-215	ENST00000522115	PPM1M	Q96MI6	270 aa		4.22	□□□□□ -1.73
PTPN12-215	ENST00000522115	CSF3R	Q99062	836 aa		4.22	□□□□□ -1.73
PTPN12-215	ENST00000522115	STRA6	Q9BX79	667 aa		4.22	□□□□□ -1.73
PTPN12-215	ENST00000522115	RANBP17	Q9H2T7	1088 aa	Known RBP	4.22	□□□□□ -1.73
PTPN12-215	ENST00000522115	PPP1R3E	Q9H7J1	279 aa		4.22	□□□□□ -1.73
PTPN12-215	ENST00000522115	EVA1A	Q9H8M9	152 aa		4.22	□□□□□ -1.73
PTPN12-215	ENST00000522115	LTB4R2	Q9NPC1	389 aa		4.22	□□□□□ -1.73
PTPN12-215	ENST00000522115	C9orf78	Q9NZ63	289 aa	Predicted RBP	4.22	□□□□□ -1.73
PTPN12-215	ENST00000522115	ABI3	Q9P2A4	366 aa		4.22	□□□□□ -1.73
PTPN12-215	ENST00000522115	HAO1	Q9UJM8	370 aa		4.22	□□□□□ -1.73
PTPN12-215	ENST00000522115	INTS6	Q9UL03	887 aa	Known RBP	4.22	□□□□□ -1.73
PTPN12-215	ENST00000522115	VDAC3	Q9Y277	283 aa		4.22	□□□□□ -1.73
PTPN12-215	ENST00000522115	CEPT1	Q9Y6K0	416 aa		4.22	□□□□□ -1.73
PTPN12-215	ENST00000522115	DOCK7	Q96N67	2140 aa		4.21	□□□□□ -1.74
PTPN12-215	ENST00000522115	HNRNPCL2	B2RXH8	293 aa		4.21	□□□□□ -1.74
PTPN12-215	ENST00000522115	PRAC2	D3DTV9	90 aa		4.21	□□□□□ -1.74
PTPN12-215	ENST00000522115	CLGN	O14967	610 aa		4.21	□□□□□ -1.74
PTPN12-215	ENST00000522115	DDN	O94850	711 aa	Predicted RBP	4.21	□□□□□ -1.74
PTPN12-215	ENST00000522115	TMEM63A	O94886	807 aa		4.21	□□□□□ -1.74
PTPN12-215	ENST00000522115	ZBTB17	Q13105	803 aa		4.21	□□□□□ -1.74
PTPN12-215	ENST00000522115	NAE1	Q13564	534 aa		4.21	□□□□□ -1.74
PTPN12-215	ENST00000522115	EIF2S3L	Q2VIR3	472 aa	Known RBP	4.21	□□□□□ -1.74
PTPN12-215	ENST00000522115	ALF	Q53S48	1182 aa		4.21	□□□□□ -1.74
PTPN12-215	ENST00000522115	FRG2	Q64ET8	278 aa		4.21	□□□□□ -1.74
PTPN12-215	ENST00000522115	TRNP1	Q6NT89	227 aa		4.21	□□□□□ -1.74
PTPN12-215	ENST00000522115	CDC73	Q6P1J9	531 aa		4.21	□□□□□ -1.74
PTPN12-215	ENST00000522115	WDR73	Q6P4I2	378 aa		4.21	□□□□□ -1.74
PTPN12-215	ENST00000522115	KCTD18	Q6PI47	426 aa	Predicted RBP	4.21	□□□□□ -1.74
PTPN12-215	ENST00000522115	PQLC2	Q6ZP29	291 aa		4.21	□□□□□ -1.74
PTPN12-215	ENST00000522115		Q6ZTC4	211 aa		4.21	□□□□□ -1.74
PTPN12-215	ENST00000522115	ZNF771	Q7L3S4	317 aa	Predicted RBP	4.21	□□□□□ -1.74
PTPN12-215	ENST00000522115	SATL1	Q86VE3	508 aa		4.21	□□□□□ -1.74
PTPN12-215	ENST00000522115	NR2C2AP	Q86WQ0	139 aa		4.21	□□□□□ -1.74
PTPN12-215	ENST00000522115	ZNF441	Q8N8Z8	693 aa		4.21	□□□□□ -1.74
PTPN12-215	ENST00000522115	NAXE	Q8NCW5	288 aa		4.21	□□□□□ -1.74
PTPN12-215	ENST00000522115	RFFL	Q8WZ73	363 aa		4.21	□□□□□ -1.74
PTPN12-215	ENST00000522115	DNASE2B	Q8WZ79	361 aa		4.21	□□□□□ -1.74
PTPN12-215	ENST00000522115	ZUFSP	Q96AP4	578 aa		4.21	□□□□□ -1.74
PTPN12-215	ENST00000522115	TMEM19	Q96HH6	336 aa		4.21	□□□□□ -1.74
PTPN12-215	ENST00000522115	MAP7D2	Q96T17	732 aa		4.21	□□□□□ -1.74

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