RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 AP3B1O00203 1094 aa22.17■■□□□ 1.14
PTP4A3-204ENST00000521578 SYNCRIPO60506 623 aaKnown RBP22.17■■□□□ 1.14
PTP4A3-204ENST00000521578 IL1BP01584 269 aa22.17■■□□□ 1.14
PTP4A3-204ENST00000521578 NFKB1P19838 968 aa22.17■■□□□ 1.14
PTP4A3-204ENST00000521578 COL9A1P20849 921 aa22.17■■□□□ 1.14
PTP4A3-204ENST00000521578 NPY2RP49146 381 aa22.17■■□□□ 1.14
PTP4A3-204ENST00000521578 BNIP1Q12981 228 aa22.17■■□□□ 1.14
PTP4A3-204ENST00000521578 STARD3Q14849 445 aa22.17■■□□□ 1.14
PTP4A3-204ENST00000521578 TTC31Q49AM3 519 aaPredicted RBP22.17■■□□□ 1.14
PTP4A3-204ENST00000521578 CDHR3Q6ZTQ4 885 aa22.17■■□□□ 1.14
PTP4A3-204ENST00000521578 UNC5BQ8IZJ1 945 aa22.17■■□□□ 1.14
PTP4A3-204ENST00000521578 FBXL6Q8N531 539 aa22.17■■□□□ 1.14
PTP4A3-204ENST00000521578 FITM2Q8N6M3 262 aa22.17■■□□□ 1.14
PTP4A3-204ENST00000521578 PCDH20Q8N6Y1 951 aaKnown RBP22.17■■□□□ 1.14
PTP4A3-204ENST00000521578 ZNF398Q8TD17 642 aa22.17■■□□□ 1.14
PTP4A3-204ENST00000521578 ACMSDQ8TDX5 336 aa22.17■■□□□ 1.14
PTP4A3-204ENST00000521578 ISG20Q96AZ6 181 aaKnown RBP22.17■■□□□ 1.14
PTP4A3-204ENST00000521578 AGAP3Q96P47 875 aa22.17■■□□□ 1.14
PTP4A3-204ENST00000521578 PPP1R2P1Q96PQ5 205 aa22.17■■□□□ 1.14
PTP4A3-204ENST00000521578 NT5MQ9NPB1 228 aa22.17■■□□□ 1.14
PTP4A3-204ENST00000521578 PIH1D1Q9NWS0 290 aaKnown RBP22.17■■□□□ 1.14
PTP4A3-204ENST00000521578 LHX3Q9UBR4 397 aa22.17■■□□□ 1.14
PTP4A3-204ENST00000521578 A0A1W2PQF6 199 aa22.16■■□□□ 1.14
PTP4A3-204ENST00000521578 MAGEB16A2A368 324 aa22.16■■□□□ 1.14
PTP4A3-204ENST00000521578 WDR91A4D1P6 747 aa22.16■■□□□ 1.14
PTP4A3-204ENST00000521578 KLF11O14901 512 aa22.16■■□□□ 1.14
PTP4A3-204ENST00000521578 MUSKO15146 869 aa22.16■■□□□ 1.14
PTP4A3-204ENST00000521578 CRHR1P34998 444 aa22.16■■□□□ 1.14
PTP4A3-204ENST00000521578 RGRP47804 291 aa22.16■■□□□ 1.14
PTP4A3-204ENST00000521578 SERPINB4P48594 390 aa22.16■■□□□ 1.14
PTP4A3-204ENST00000521578 PRPSAP1Q14558 356 aa22.16■■□□□ 1.14
PTP4A3-204ENST00000521578 C9orf64Q5T6V5 341 aa22.16■■□□□ 1.14
PTP4A3-204ENST00000521578 PACS1Q6VY07 963 aa22.16■■□□□ 1.14
PTP4A3-204ENST00000521578 SYT13Q7L8C5 426 aa22.16■■□□□ 1.14
PTP4A3-204ENST00000521578 BMP8AQ7Z5Y6 402 aa22.16■■□□□ 1.14
PTP4A3-204ENST00000521578 TMEM135Q86UB9 458 aa22.16■■□□□ 1.14
PTP4A3-204ENST00000521578 BBS5Q8N3I7 341 aa22.16■■□□□ 1.14
PTP4A3-204ENST00000521578 PGBD5Q8N414 524 aa22.16■■□□□ 1.14
PTP4A3-204ENST00000521578 SPEM1Q8N4L4 309 aa22.16■■□□□ 1.14
PTP4A3-204ENST00000521578 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.16■■□□□ 1.14
PTP4A3-204ENST00000521578 TEX26Q8N6G2 289 aa22.16■■□□□ 1.14
PTP4A3-204ENST00000521578 TMEM105Q8N8V8 129 aa22.16■■□□□ 1.14
PTP4A3-204ENST00000521578 OR2A12Q8NGT7 310 aa22.16■■□□□ 1.14
PTP4A3-204ENST00000521578 OR6K2Q8NGY2 324 aa22.16■■□□□ 1.14
PTP4A3-204ENST00000521578 PSKH2Q96QS6 385 aa22.16■■□□□ 1.14
PTP4A3-204ENST00000521578 IQCGQ9H095 443 aaKnown RBP22.16■■□□□ 1.14
PTP4A3-204ENST00000521578 PRSS16Q9NQE7 514 aa22.16■■□□□ 1.14
PTP4A3-204ENST00000521578 CKAP5Q14008 2032 aa22.16■■□□□ 1.14
PTP4A3-204ENST00000521578 MAXP61244 160 aa22.15■■□□□ 1.14
PTP4A3-204ENST00000521578 CRY1Q16526 586 aa22.15■■□□□ 1.14
PTP4A3-204ENST00000521578 MROH9Q5TGP6 573 aa22.15■■□□□ 1.14
PTP4A3-204ENST00000521578 PACS2Q86VP3 889 aa22.15■■□□□ 1.14
PTP4A3-204ENST00000521578 STK40Q8N2I9 435 aa22.15■■□□□ 1.14
PTP4A3-204ENST00000521578 RYBPQ8N488 228 aaPredicted RBP22.15■■□□□ 1.14
PTP4A3-204ENST00000521578 CNTD1Q8N815 330 aa22.15■■□□□ 1.14
PTP4A3-204ENST00000521578 C10orf82Q8WW14 230 aa22.15■■□□□ 1.14
PTP4A3-204ENST00000521578 IL12RB2Q99665 862 aa22.15■■□□□ 1.14
PTP4A3-204ENST00000521578 C11orf16Q9NQ32 467 aa22.15■■□□□ 1.14
PTP4A3-204ENST00000521578 TTC24A2A3L6 582 aaPredicted RBP22.14■■□□□ 1.14
PTP4A3-204ENST00000521578 GJB3O75712 270 aa22.14■■□□□ 1.14
PTP4A3-204ENST00000521578 RASSF9O75901 435 aa22.14■■□□□ 1.14
PTP4A3-204ENST00000521578 RECQLP46063 649 aaPredicted RBP22.14■■□□□ 1.14
PTP4A3-204ENST00000521578 SNRPD1P62314 119 aaKnown RBP22.14■■□□□ 1.14
PTP4A3-204ENST00000521578 ITKQ08881 620 aa22.14■■□□□ 1.14
PTP4A3-204ENST00000521578 CARD16Q5EG05 197 aa22.14■■□□□ 1.14
PTP4A3-204ENST00000521578 DPY19L3Q6ZPD9 716 aa22.14■■□□□ 1.14
PTP4A3-204ENST00000521578 CHST14Q8NCH0 376 aa22.14■■□□□ 1.14
PTP4A3-204ENST00000521578 OR2AP1Q8NGE2 309 aa22.14■■□□□ 1.14
PTP4A3-204ENST00000521578 CERS2Q96G23 380 aa22.14■■□□□ 1.14
PTP4A3-204ENST00000521578 GGT7Q9UJ14 662 aa22.14■■□□□ 1.14
PTP4A3-204ENST00000521578 RPS6KL1Q9Y6S9 549 aa22.14■■□□□ 1.14
PTP4A3-204ENST00000521578 USP1O94782 785 aa22.14■■□□□ 1.13
PTP4A3-204ENST00000521578 HLA-DQB2P05538 268 aa22.14■■□□□ 1.13
PTP4A3-204ENST00000521578 ALDH3A1P30838 453 aa22.14■■□□□ 1.13
PTP4A3-204ENST00000521578 OLIG2Q13516 323 aa22.14■■□□□ 1.13
PTP4A3-204ENST00000521578 CAMK2GQ13555 558 aaPredicted RBP22.14■■□□□ 1.13
PTP4A3-204ENST00000521578 TRIM42Q8IWZ5 723 aa22.14■■□□□ 1.13
PTP4A3-204ENST00000521578 FCRL3Q96P31 734 aaPredicted RBP22.14■■□□□ 1.13
PTP4A3-204ENST00000521578 SPATA6Q9NWH7 488 aaPredicted RBP22.14■■□□□ 1.13
PTP4A3-204ENST00000521578 EVLQ9UI08 416 aaPredicted RBP22.14■■□□□ 1.13
PTP4A3-204ENST00000521578 CACNA1IQ9P0X4 2223 aa22.13■■□□□ 1.13
PTP4A3-204ENST00000521578 FAM237BA0A1B0GVD1 139 aa22.13■■□□□ 1.13
PTP4A3-204ENST00000521578 USP12O75317 370 aa22.13■■□□□ 1.13
PTP4A3-204ENST00000521578 TGDSO95455 350 aa22.13■■□□□ 1.13
PTP4A3-204ENST00000521578 IGSF6O95976 241 aa22.13■■□□□ 1.13
PTP4A3-204ENST00000521578 GKP32189 559 aa22.13■■□□□ 1.13
PTP4A3-204ENST00000521578 CCNHP51946 323 aaPredicted RBP22.13■■□□□ 1.13
PTP4A3-204ENST00000521578 SATB1Q01826 763 aa22.13■■□□□ 1.13
PTP4A3-204ENST00000521578 NAPEPLDQ6IQ20 393 aa22.13■■□□□ 1.13
PTP4A3-204ENST00000521578 LINC00523Q86TU6 105 aa22.13■■□□□ 1.13
PTP4A3-204ENST00000521578 CACUL1Q86Y37 369 aa22.13■■□□□ 1.13
PTP4A3-204ENST00000521578 NDUFAF2Q8N183 169 aa22.13■■□□□ 1.13
PTP4A3-204ENST00000521578 FCRL5Q96RD9 977 aa22.13■■□□□ 1.13
PTP4A3-204ENST00000521578 CD248Q9HCU0 757 aa22.13■■□□□ 1.13
PTP4A3-204ENST00000521578 SLC40A1Q9NP59 571 aa22.13■■□□□ 1.13
PTP4A3-204ENST00000521578 ZCWPW2A0A1B0GU75 182 aa22.12■■□□□ 1.13
PTP4A3-204ENST00000521578 TCRBV21S2A2A0A5A6 115 aa22.12■■□□□ 1.13
PTP4A3-204ENST00000521578 INSIG1O15503 277 aa22.12■■□□□ 1.13
PTP4A3-204ENST00000521578 DCTN3O75935 186 aa22.12■■□□□ 1.13
PTP4A3-204ENST00000521578 GSRP00390 522 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms