RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 KIF3AQ9Y496 699 aa6.8□□□□□ -1.32
NUDCD1-204ENST00000521439 TNFRSF18Q9Y5U5 241 aa6.8□□□□□ -1.32
NUDCD1-204ENST00000521439 IKBKGQ9Y6K9 419 aa6.8□□□□□ -1.32
NUDCD1-204ENST00000521439 TRIM64CA6NLI5 447 aa6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 TMCO5BA8MYB1 307 aa6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 RGS11O94810 467 aa6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 SYF2O95926 243 aaKnown RBP6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 ARSBP15848 533 aa6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 GNLYP22749 145 aa6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 PPARGP37231 505 aaPredicted RBP6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 PLCD1P51178 756 aa6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 NIPAL4Q0D2K0 466 aa6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 WASHC5Q12768 1159 aa6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 LAMB3Q13751 1172 aa6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 DRAP1Q14919 205 aaPredicted RBP6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 SHBQ15464 509 aa6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 PRTGQ2VWP7 1150 aa6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 SGO1Q5FBB7 561 aa6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 LCTLQ6UWM7 567 aa6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 KRT77Q7Z794 578 aa6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 RPAP2Q8IXW5 612 aaPredicted RBP6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 MB21D2Q8IYB1 491 aaPredicted RBP6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 C7orf57Q8NEG2 295 aa6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 GPT2Q8TD30 523 aa6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 TEKT1Q969V4 418 aa6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 RMDN2Q96LZ7 410 aa6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 TKTL2Q9H0I9 626 aa6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 CYSLTR2Q9NS75 346 aa6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 POT1Q9NUX5 634 aa6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 NSMCE4AQ9NXX6 385 aa6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 VPS28Q9UK41 221 aa6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 ACAD8Q9UKU7 415 aa6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 NFE2L3Q9Y4A8 694 aa6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 SRPRBQ9Y5M8 271 aaKnown RBP6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 BIVM-ERCC5R4GMW8 1640 aa6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 RAPGEF2Q9Y4G8 1499 aa6.79□□□□□ -1.32
NUDCD1-204ENST00000521439 CNTLNQ9NXG0 1405 aa6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 KDM5BQ9UGL1 1544 aa6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 MYO1GB0I1T2 1018 aa6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 PTGES3LE9PB15 166 aa6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 H0YGN5 161 aa6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 SOCS2O14508 198 aa6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 LDB2O43679 373 aa6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 MOSPD3O75425 235 aa6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 TGFB3P10600 412 aa6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 SKILP12757 684 aa6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 KRT10P13645 584 aa6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 TNNT3P45378 269 aaPredicted RBP6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 CLK1P49759 484 aaKnown RBP6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 P2RX3P56373 397 aa6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 ZP1P60852 638 aa6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 PRAMEP78395 509 aa6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 GPR18Q14330 331 aa6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 C11orf87Q6NUJ2 197 aa6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 KLHL35Q6PF15 583 aa6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 SARM1Q6SZW1 724 aa6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 CTU1Q7Z7A3 348 aaKnown RBP6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 WDTC1Q8N5D0 677 aa6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 BEST2Q8NFU1 509 aa6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 C17orf50Q8WW18 174 aa6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 SLITRK1Q96PX8 696 aa6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 IWS1Q96ST2 819 aa6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 FTOQ9C0B1 505 aaKnown RBP eCLIP6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 IQCGQ9H095 443 aaKnown RBP6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 CATSPERBQ9H7T0 1116 aa6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 KAT14Q9H8E8 782 aa6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 KRCC1Q9NPI7 259 aaPredicted RBP6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 ELOVL5Q9NYP7 299 aa6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 TBC1D29Q9UFV1 150 aa6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 TMCC3Q9ULS5 477 aa6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 COL3A1P02461 1466 aaPredicted RBP6.78□□□□□ -1.32
NUDCD1-204ENST00000521439 TOP2BQ02880 1626 aa6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 FAM237AA0A1B0GTK4 181 aa6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 MS4A18H0YCH9 400 aa6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 I6L893 689 aaPredicted RBP6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 MMP2P08253 660 aa6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 LMO1P25800 156 aa6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 CHATP28329 748 aa6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 THPOP40225 353 aa6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 HADHAP40939 763 aa6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 ZNF132P52740 706 aa6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 F2RL1P55085 397 aa6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 ST3GAL1Q11201 340 aa6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 CRYMQ14894 314 aa6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 ODF3L2Q3SX64 289 aa6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 FILIP1LQ4L180 1135 aa6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 CXorf66Q5JRM2 361 aaPredicted RBP6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 FBXO46Q6PJ61 603 aaPredicted RBP6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 COLCA1Q6ZS62 124 aa6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 MON1BQ7L1V2 547 aa6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 ZNF367Q7RTV3 350 aa6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 PIM3Q86V86 326 aa6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 SLC35F3Q8IY50 421 aa6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 NDUFAF2Q8N183 169 aa6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 NRACQ8N912 160 aa6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 HUS1BQ8NHY5 278 aa6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 NSUN4Q96CB9 384 aaKnown RBP6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 CCDC34Q96HJ3 373 aa6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 RSRC1Q96IZ7 334 aaKnown RBP6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 APOLD1Q96LR9 279 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms