RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 NUS1Q96E22 293 aa17.07■□□□□ 0.32
SQLE-205ENST00000521232 RBM15Q96T37 977 aaKnown RBP eCLIP17.07■□□□□ 0.321e-6■■□□□ 12.4
SQLE-205ENST00000521232 LGR4Q9BXB1 951 aa17.07■□□□□ 0.32
SQLE-205ENST00000521232 ABCG4Q9H172 646 aa17.07■□□□□ 0.32
SQLE-205ENST00000521232 RAXQ9Y2V3 346 aa17.07■□□□□ 0.32
SQLE-205ENST00000521232 PDE2AO00408 941 aaPredicted RBP17.06■□□□□ 0.32
SQLE-205ENST00000521232 LCA5LO95447 670 aa17.06■□□□□ 0.32
SQLE-205ENST00000521232 KRT10P13645 584 aa17.06■□□□□ 0.32
SQLE-205ENST00000521232 HADHBP55084 474 aaKnown RBP17.06■□□□□ 0.32
SQLE-205ENST00000521232 DSC2Q02487 901 aa17.06■□□□□ 0.32
SQLE-205ENST00000521232 PPIDQ08752 370 aaKnown RBP17.06■□□□□ 0.32
SQLE-205ENST00000521232 NIPAL4Q0D2K0 466 aa17.06■□□□□ 0.32
SQLE-205ENST00000521232 PTPRRQ15256 657 aa17.06■□□□□ 0.32
SQLE-205ENST00000521232 KCTD16Q68DU8 428 aa17.06■□□□□ 0.32
SQLE-205ENST00000521232 USP45Q70EL2 814 aa17.06■□□□□ 0.32
SQLE-205ENST00000521232 EFL1Q7Z2Z2 1120 aaKnown RBP17.06■□□□□ 0.32
SQLE-205ENST00000521232 HSD11B1LQ7Z5J1 315 aa17.06■□□□□ 0.32
SQLE-205ENST00000521232 TECPR1Q7Z6L1 1165 aa17.06■□□□□ 0.32
SQLE-205ENST00000521232 TSPAN33Q86UF1 283 aa17.06■□□□□ 0.32
SQLE-205ENST00000521232 GKN2Q86XP6 184 aa17.06■□□□□ 0.32
SQLE-205ENST00000521232 RHOT1Q8IXI2 618 aa17.06■□□□□ 0.32
SQLE-205ENST00000521232 CCNYQ8ND76 341 aa17.06■□□□□ 0.32
SQLE-205ENST00000521232 MAPK15Q8TD08 544 aa17.06■□□□□ 0.32
SQLE-205ENST00000521232 LRRN4Q8WUT4 740 aa17.06■□□□□ 0.32
SQLE-205ENST00000521232 OR1E3Q8WZA6 343 aa17.06■□□□□ 0.32
SQLE-205ENST00000521232 DTD2Q96FN9 168 aa17.06■□□□□ 0.32
SQLE-205ENST00000521232 PDXPQ96GD0 296 aa17.06■□□□□ 0.32
SQLE-205ENST00000521232 MAK16Q9BXY0 300 aaKnown RBP17.06■□□□□ 0.32
SQLE-205ENST00000521232 WDR26Q9H7D7 661 aa17.06■□□□□ 0.32
SQLE-205ENST00000521232 DOLKQ9UPQ8 538 aa17.06■□□□□ 0.32
SQLE-205ENST00000521232 GPSM3Q9Y4H4 160 aa17.06■□□□□ 0.32
SQLE-205ENST00000521232 ARHGEF17Q96PE2 2063 aaPredicted RBP17.05■□□□□ 0.32
SQLE-205ENST00000521232 A0A0J9YYE9 177 aa17.05■□□□□ 0.32
SQLE-205ENST00000521232 PRLP01236 227 aa17.05■□□□□ 0.32
SQLE-205ENST00000521232 JCHAINP01591 159 aa17.05■□□□□ 0.32
SQLE-205ENST00000521232 TRBC1P01850 177 aa17.05■□□□□ 0.32
SQLE-205ENST00000521232 HLA-DQB2P05538 268 aa17.05■□□□□ 0.32
SQLE-205ENST00000521232 ZFXP17010 805 aaPredicted RBP17.05■□□□□ 0.32
SQLE-205ENST00000521232 CTPS1P17812 591 aa17.05■□□□□ 0.32
SQLE-205ENST00000521232 COMTP21964 271 aa17.05■□□□□ 0.32
SQLE-205ENST00000521232 TGM2P21980 687 aa17.05■□□□□ 0.32
SQLE-205ENST00000521232 TEAD1P28347 426 aa17.05■□□□□ 0.32
SQLE-205ENST00000521232 ETV3P41162 512 aa17.05■□□□□ 0.32
SQLE-205ENST00000521232 MAGEA1P43355 309 aa17.05■□□□□ 0.32
SQLE-205ENST00000521232 PTSQ03393 145 aa17.05■□□□□ 0.32
SQLE-205ENST00000521232 DPTQ07507 201 aa17.05■□□□□ 0.32
SQLE-205ENST00000521232 ARHGEF7Q14155 803 aa17.05■□□□□ 0.32
SQLE-205ENST00000521232 DENND2CQ68D51 928 aa17.05■□□□□ 0.32
SQLE-205ENST00000521232 CRTC1Q6UUV9 634 aa17.05■□□□□ 0.32
SQLE-205ENST00000521232 Q6ZVL8 140 aa17.05■□□□□ 0.32
SQLE-205ENST00000521232 NLRP8Q86W28 1048 aa17.05■□□□□ 0.32
SQLE-205ENST00000521232 NAT6Q93015 286 aa17.05■□□□□ 0.32
SQLE-205ENST00000521232 ZNF830Q96NB3 372 aaPredicted RBP17.05■□□□□ 0.32
SQLE-205ENST00000521232 LGMNQ99538 433 aa17.05■□□□□ 0.32
SQLE-205ENST00000521232 TDRD1Q9BXT4 1180 aaKnown RBP17.05■□□□□ 0.32
SQLE-205ENST00000521232 TEX101Q9BY14 249 aa17.05■□□□□ 0.32
SQLE-205ENST00000521232 FGF22Q9HCT0 170 aa17.05■□□□□ 0.32
SQLE-205ENST00000521232 MRPL40Q9NQ50 206 aaKnown RBP17.05■□□□□ 0.32
SQLE-205ENST00000521232 DDX56Q9NY93 547 aaKnown RBP17.05■□□□□ 0.32
SQLE-205ENST00000521232 PADI4Q9UM07 663 aa17.05■□□□□ 0.32
SQLE-205ENST00000521232 AK5Q9Y6K8 562 aa17.05■□□□□ 0.32
SQLE-205ENST00000521232 ADAMTS20P59510 1910 aa17.04■□□□□ 0.32
SQLE-205ENST00000521232 APOL1O14791 398 aa17.04■□□□□ 0.32
SQLE-205ENST00000521232 MYCLP1P12525 358 aaPredicted RBP17.04■□□□□ 0.32
SQLE-205ENST00000521232 RPL26P61254 145 aaKnown RBP17.04■□□□□ 0.32
SQLE-205ENST00000521232 IFI35P80217 286 aaPredicted RBP17.04■□□□□ 0.32
SQLE-205ENST00000521232 PERM1Q5SV97 790 aa17.04■□□□□ 0.32
SQLE-205ENST00000521232 RAVER1Q8IY67 606 aaKnown RBP17.04■□□□□ 0.32
SQLE-205ENST00000521232 CCDC170Q8IYT3 715 aa17.04■□□□□ 0.32
SQLE-205ENST00000521232 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.04■□□□□ 0.32
SQLE-205ENST00000521232 CNTD1Q8N815 330 aa17.04■□□□□ 0.32
SQLE-205ENST00000521232 ARL10Q8N8L6 244 aa17.04■□□□□ 0.32
SQLE-205ENST00000521232 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.04■□□□□ 0.32
SQLE-205ENST00000521232 RNF25Q96BH1 459 aaPredicted RBP17.04■□□□□ 0.32
SQLE-205ENST00000521232 DEPDC7Q96QD5 511 aa17.04■□□□□ 0.32
SQLE-205ENST00000521232 SMIM14Q96QK8 99 aa17.04■□□□□ 0.32
SQLE-205ENST00000521232 PHPT1Q9NRX4 125 aaPredicted RBP17.04■□□□□ 0.32
SQLE-205ENST00000521232 RPL26L1Q9UNX3 145 aaKnown RBP17.04■□□□□ 0.32
SQLE-205ENST00000521232 CHKBQ9Y259 395 aa17.04■□□□□ 0.32
SQLE-205ENST00000521232 HYOU1Q9Y4L1 999 aa17.04■□□□□ 0.32
SQLE-205ENST00000521232 TTLL3Q9Y4R7 772 aa17.04■□□□□ 0.32
SQLE-205ENST00000521232 HEY1Q9Y5J3 304 aa17.04■□□□□ 0.32
SQLE-205ENST00000521232 KCNK1O00180 336 aa17.03■□□□□ 0.32
SQLE-205ENST00000521232 KRT1P04264 644 aa17.03■□□□□ 0.32
SQLE-205ENST00000521232 MMP2P08253 660 aa17.03■□□□□ 0.32
SQLE-205ENST00000521232 ZNF30P17039 623 aa17.03■□□□□ 0.32
SQLE-205ENST00000521232 CA4P22748 312 aa17.03■□□□□ 0.32
SQLE-205ENST00000521232 EPHB1P54762 984 aa17.03■□□□□ 0.32
SQLE-205ENST00000521232 PDK1Q15118 436 aa17.03■□□□□ 0.32
SQLE-205ENST00000521232 TAZQ16635 292 aa17.03■□□□□ 0.32
SQLE-205ENST00000521232 ODF2Q5BJF6 829 aa17.03■□□□□ 0.32
SQLE-205ENST00000521232 LRRC66Q68CR7 880 aa17.03■□□□□ 0.32
SQLE-205ENST00000521232 OGFOD3Q6PK18 319 aa17.03■□□□□ 0.32
SQLE-205ENST00000521232 HEATR4Q86WZ0 1026 aa17.03■□□□□ 0.32
SQLE-205ENST00000521232 OLFM3Q96PB7 478 aa17.03■□□□□ 0.32
SQLE-205ENST00000521232 LYSMD1Q96S90 227 aa17.03■□□□□ 0.32
SQLE-205ENST00000521232 ANP32EQ9BTT0 268 aa17.03■□□□□ 0.32
SQLE-205ENST00000521232 RBSNQ9H1K0 784 aa17.03■□□□□ 0.32
SQLE-205ENST00000521232 PCDH9Q9HC56 1237 aa17.03■□□□□ 0.32
SQLE-205ENST00000521232 CYP4F12Q9HCS2 524 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms