RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 BPIFA1Q9NP55 256 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 OR6C3Q9NZP0 311 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 WNT16Q9UBV4 365 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 ISY1Q9ULR0 285 aaKnown RBP3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 NAP1L2Q9ULW6 460 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 NFE2L3Q9Y4A8 694 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 INSL5Q9Y5Q6 135 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 UHRF1BP1LA0JNW5 1464 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 CCDC141Q6ZP82 1450 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 ADGBQ8N7X0 1667 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 ITIH6Q6UXX5 1313 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 NPC1L1Q9UHC9 1359 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 PTPRTO14522 1441 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 NCOA3Q9Y6Q9 1424 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 KIF14Q15058 1648 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 A0A087X0M5 115 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 A0A1B0GX30 115 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 A0A1W2PRG0 241 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 SEC14L5O43304 696 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 WDHD1O75717 1129 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 RGS11O94810 467 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 CCNDBP1O95273 360 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 VNN2O95498 520 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 TBX18O95935 607 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 CLEC3BP05452 202 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 MMP2P08253 660 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 ITGAXP20702 1163 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 CDAP32320 146 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 MAN1A1P33908 653 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 BSGP35613 385 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 RARSP54136 660 aaKnown RBP3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 RAD23BP54727 409 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 NEDD9Q14511 834 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 TSTQ16762 297 aaKnown RBP3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 TMTC3Q6ZXV5 915 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 MAATS1Q7Z4T9 603 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 DHX40Q8IX18 779 aaKnown RBP3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 FBXL14Q8N1E6 418 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 AADATQ8N5Z0 425 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 IQCF1Q8N6M8 205 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 SCCPDHQ8NBX0 429 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 BEST2Q8NFU1 509 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 B4GALNT2Q8NHY0 566 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 FAM216AQ8WUB2 273 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 LRFN5Q96NI6 719 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 ZNF570Q96NI8 536 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 NAP1L5Q96NT1 182 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 CAMK1GQ96NX5 476 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 MAP7D2Q96T17 732 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 USP44Q9H0E7 712 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 MAGEE1Q9HCI5 957 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 ASAH2Q9NR71 780 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 OLA1Q9NTK5 396 aaKnown RBP3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 CTNNAL1Q9UBT7 734 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 HAO1Q9UJM8 370 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 AGO1Q9UL18 857 aaKnown RBP3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 LSM4Q9Y4Z0 139 aaKnown RBP3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 ERCC6Q03468 1493 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 CROCC2H7BZ55 1655 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 FAM135AQ9P2D6 1515 aa3.38□□□□□ -1.87
HMGB1P41-201ENST00000520234 LAMC1P11047 1609 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 SHROOM2Q13796 1616 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 BLMP54132 1417 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 ERBINQ96RT1 1412 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 MAGI2Q86UL8 1455 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 CDC42BPAQ5VT25 1732 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 NPIPB15A6NHN6 443 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 EIF3CLB5ME19 914 aaKnown RBP3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 BCAT2O15382 392 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 ALPLP05186 524 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 PRSS2P07478 247 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 DDX5P17844 614 aaKnown RBP3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 EDN2P20800 178 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 TNFAIP3P21580 790 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 SHMT1P34896 483 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 RPL3P39023 403 aaKnown RBP3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 CDKN2AP42771 156 aaKnown RBP3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 MXI1P50539 228 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 OLR1P78380 273 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 ECT2LQ008S8 904 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 DPCR1Q3MIW9 517 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 SGO1Q5FBB7 561 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 PPP6R3Q5H9R7 873 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 PLEKHA7Q6IQ23 1121 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 LRRC8EQ6NSJ5 796 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 DLK2Q6UY11 383 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 CCDC129Q6ZRS4 1044 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 CPLX4Q7Z7G2 160 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 ZDHHC17Q8IUH5 632 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 SAMD14Q8IZD0 417 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 AGBL3Q8NEM8 1001 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 ELP5Q8TE02 316 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 SMARCE1Q969G3 411 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 MIB2Q96AX9 1013 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 SKA1Q96BD8 255 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 PHF21BQ96EK2 531 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 PIP5K1AQ99755 562 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 SLC25A33Q9BSK2 321 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 WACQ9BTA9 647 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms