RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 WSCD2Q2TBF2 565 aa12.52□□□□□ -0.41
TRAPPC9-206ENST00000519482 TMCO4Q5TGY1 634 aa12.52□□□□□ -0.41
TRAPPC9-206ENST00000519482 ESRP1Q6NXG1 681 aaKnown RBP12.52□□□□□ -0.41
TRAPPC9-206ENST00000519482 GUSBP11Q6P575 273 aa12.52□□□□□ -0.41
TRAPPC9-206ENST00000519482 LVRNQ6Q4G3 990 aa12.52□□□□□ -0.41
TRAPPC9-206ENST00000519482 EFL1Q7Z2Z2 1120 aaKnown RBP12.52□□□□□ -0.41
TRAPPC9-206ENST00000519482 ZSWIM9Q86XI8 627 aa12.52□□□□□ -0.41
TRAPPC9-206ENST00000519482 LRRC57Q8N9N7 239 aa12.52□□□□□ -0.41
TRAPPC9-206ENST00000519482 ATL2Q8NHH9 583 aa12.52□□□□□ -0.41
TRAPPC9-206ENST00000519482 WDR48Q8TAF3 677 aa12.52□□□□□ -0.41
TRAPPC9-206ENST00000519482 SLC35G2Q8TBE7 412 aa12.52□□□□□ -0.41
TRAPPC9-206ENST00000519482 SCG3Q8WXD2 468 aaKnown RBP12.52□□□□□ -0.41
TRAPPC9-206ENST00000519482 NAT6Q93015 286 aa12.52□□□□□ -0.41
TRAPPC9-206ENST00000519482 ECHDC3Q96DC8 303 aa12.52□□□□□ -0.41
TRAPPC9-206ENST00000519482 ZNF578Q96N58 590 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC9-206ENST00000519482 ZNF599Q96NL3 588 aa12.52□□□□□ -0.41
TRAPPC9-206ENST00000519482 APOOQ9BUR5 198 aa12.52□□□□□ -0.41
TRAPPC9-206ENST00000519482 CINPQ9BW66 212 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC9-206ENST00000519482 PACSIN1Q9BY11 444 aa12.52□□□□□ -0.41
TRAPPC9-206ENST00000519482 TRIM7Q9C029 511 aa12.52□□□□□ -0.41
TRAPPC9-206ENST00000519482 CLPBQ9H078 707 aa12.52□□□□□ -0.41
TRAPPC9-206ENST00000519482 ZWILCHQ9H900 591 aa12.52□□□□□ -0.41
TRAPPC9-206ENST00000519482 POLR1BQ9H9Y6 1135 aa12.52□□□□□ -0.41
TRAPPC9-206ENST00000519482 CWC15Q9P013 229 aaKnown RBP12.52□□□□□ -0.41
TRAPPC9-206ENST00000519482 AMFRQ9UKV5 643 aa12.52□□□□□ -0.41
TRAPPC9-206ENST00000519482 COQ6Q9Y2Z9 468 aa12.52□□□□□ -0.41
TRAPPC9-206ENST00000519482 SMG1Q96Q15 3661 aaKnown RBP12.51□□□□□ -0.41
TRAPPC9-206ENST00000519482 YY2O15391 372 aa12.51□□□□□ -0.41
TRAPPC9-206ENST00000519482 RASGRP1O95267 797 aa12.51□□□□□ -0.41
TRAPPC9-206ENST00000519482 ALPIP09923 528 aa12.51□□□□□ -0.41
TRAPPC9-206ENST00000519482 ERVPABLB-1P60509 514 aa12.51□□□□□ -0.41
TRAPPC9-206ENST00000519482 AP1S1P61966 158 aa12.51□□□□□ -0.41
TRAPPC9-206ENST00000519482 GABREP78334 506 aa12.51□□□□□ -0.41
TRAPPC9-206ENST00000519482 MTM1Q13496 603 aa12.51□□□□□ -0.41
TRAPPC9-206ENST00000519482 COL9A2Q14055 689 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC9-206ENST00000519482 DPYSQ14117 519 aa12.51□□□□□ -0.41
TRAPPC9-206ENST00000519482 INPP5AQ14642 412 aa12.51□□□□□ -0.41
TRAPPC9-206ENST00000519482 NFATC4Q14934 902 aa12.51□□□□□ -0.41
TRAPPC9-206ENST00000519482 PPP2R5EQ16537 467 aa12.51□□□□□ -0.41
TRAPPC9-206ENST00000519482 DPYSL2Q16555 572 aa12.51□□□□□ -0.41
TRAPPC9-206ENST00000519482 BOLA3Q53S33 107 aa12.51□□□□□ -0.41
TRAPPC9-206ENST00000519482 IGF2-ASQ6U949 168 aa12.51□□□□□ -0.41
TRAPPC9-206ENST00000519482 PEX26Q7Z412 305 aa12.51□□□□□ -0.41
TRAPPC9-206ENST00000519482 SLC35F3Q8IY50 421 aa12.51□□□□□ -0.41
TRAPPC9-206ENST00000519482 NPWQ8N729 165 aa12.51□□□□□ -0.41
TRAPPC9-206ENST00000519482 ZNF248Q8NDW4 579 aa12.51□□□□□ -0.41
TRAPPC9-206ENST00000519482 SPATA4Q8NEY3 305 aa12.51□□□□□ -0.41
TRAPPC9-206ENST00000519482 SPOCK2Q92563 424 aa12.51□□□□□ -0.41
TRAPPC9-206ENST00000519482 CRELD1Q96HD1 420 aa12.51□□□□□ -0.41
TRAPPC9-206ENST00000519482 PSKH2Q96QS6 385 aa12.51□□□□□ -0.41
TRAPPC9-206ENST00000519482 PRORYQ9H606 182 aa12.51□□□□□ -0.41
TRAPPC9-206ENST00000519482 UVRAGQ9P2Y5 699 aa12.51□□□□□ -0.41
TRAPPC9-206ENST00000519482 TTC7AQ9ULT0 858 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC9-206ENST00000519482 BPTFQ12830 3046 aa12.51□□□□□ -0.41
TRAPPC9-206ENST00000519482 KIF26BQ2KJY2 2108 aa12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 A0A1W2PQ67 120 aa12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 MIF4GDA9UHW6 222 aaKnown RBP12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 H3BRJ5 948 aa12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 TRAFD1O14545 582 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 MUSKO15146 869 aa12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 MPOP05164 745 aa12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 CTSEP14091 401 aa12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 HSPA9P38646 679 aaKnown RBP12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 ARL4AP40617 200 aa12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 PCBP4P57723 403 aaKnown RBP12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 PIGHQ14442 188 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 LBRQ14739 615 aaKnown RBP12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 ALG11Q2TAA5 492 aa12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 MAP9Q49MG5 647 aa12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 PERM1Q5SV97 790 aa12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 ENPP7Q6UWV6 458 aa12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 LIPIQ6XZB0 460 aa12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 RBM44Q6ZP01 1051 aaKnown RBP12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 ARHGAP36Q6ZRI8 547 aa12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 DPPA4Q7L190 304 aa12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 GKN2Q86XP6 184 aa12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 HID1Q8IV36 788 aa12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 PAF1Q8N7H5 531 aa12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 ACTRT1Q8TDG2 376 aa12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 TSACCQ96A04 125 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 WDR92Q96MX6 357 aa12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 UBL7Q96S82 380 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 NAP1L3Q99457 506 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 ANKZF1Q9H8Y5 726 aa12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 KLQ9UEF7 1012 aa12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 SEPT3Q9UH03 358 aa12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 PADI4Q9UM07 663 aa12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 DOLKQ9UPQ8 538 aa12.5□□□□□ -0.41
TRAPPC9-206ENST00000519482 SOCS5O75159 536 aa12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 RECQL5O94762 991 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 ZRANB2O95218 330 aaKnown RBP eCLIP12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 TNFP01375 233 aa12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 PRKCGP05129 697 aa12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 CYP1A2P05177 515 aa12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 HOXC4P09017 264 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 ELFN1P0C7U0 828 aa12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 KELP23276 732 aa12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 IL1R2P27930 398 aa12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 SCNN1BP51168 640 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms