RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 DTD2Q96FN9 168 aa13.32□□□□□ -0.28
VEGFA-219ENST00000518824 PDXPQ96GD0 296 aa13.32□□□□□ -0.28
VEGFA-219ENST00000518824 TRIB3Q96RU7 358 aa13.32□□□□□ -0.28
VEGFA-219ENST00000518824 AGAP2Q99490 1192 aa13.32□□□□□ -0.28
VEGFA-219ENST00000518824 LRRC61Q9BV99 259 aa13.32□□□□□ -0.28
VEGFA-219ENST00000518824 PCDH9Q9HC56 1237 aa13.32□□□□□ -0.28
VEGFA-219ENST00000518824 UBP1Q9NZI7 540 aa13.32□□□□□ -0.28
VEGFA-219ENST00000518824 AMACRQ9UHK6 382 aa13.32□□□□□ -0.28
VEGFA-219ENST00000518824 APOBEC2Q9Y235 224 aaKnown RBP13.32□□□□□ -0.28
VEGFA-219ENST00000518824 ADGRG1Q9Y653 693 aa13.32□□□□□ -0.28
VEGFA-219ENST00000518824 A0A1W2PQ67 120 aa13.31□□□□□ -0.28
VEGFA-219ENST00000518824 DDX3YO15523 660 aaKnown RBP13.31□□□□□ -0.28
VEGFA-219ENST00000518824 CLDN7O95471 211 aa13.31□□□□□ -0.28
VEGFA-219ENST00000518824 SOD1P00441 154 aa13.31□□□□□ -0.28
VEGFA-219ENST00000518824 FUCA1P04066 466 aa13.31□□□□□ -0.28
VEGFA-219ENST00000518824 PIRTP0C851 137 aa13.31□□□□□ -0.28
VEGFA-219ENST00000518824 CYP2A6P11509 494 aaPredicted RBP13.31□□□□□ -0.28
VEGFA-219ENST00000518824 NR2C2P49116 596 aa13.31□□□□□ -0.28
VEGFA-219ENST00000518824 HNRNPKP61978 463 aaKnown RBP eCLIP13.31□□□□□ -0.288e-7■■■■□ 21.9
VEGFA-219ENST00000518824 MTM1Q13496 603 aa13.31□□□□□ -0.28
VEGFA-219ENST00000518824 NFATC4Q14934 902 aa13.31□□□□□ -0.28
VEGFA-219ENST00000518824 NOMO1Q15155 1222 aa13.31□□□□□ -0.28
VEGFA-219ENST00000518824 PPP2R5EQ16537 467 aa13.31□□□□□ -0.28
VEGFA-219ENST00000518824 INAVAQ3KP66 663 aa13.31□□□□□ -0.28
VEGFA-219ENST00000518824 TEX44Q53QW1 395 aa13.31□□□□□ -0.28
VEGFA-219ENST00000518824 PRRT3Q5FWE3 981 aa13.31□□□□□ -0.28
VEGFA-219ENST00000518824 FAXCQ5TGI0 409 aa13.31□□□□□ -0.28
VEGFA-219ENST00000518824 ESRP1Q6NXG1 681 aaKnown RBP13.31□□□□□ -0.28
VEGFA-219ENST00000518824 PNCKQ6P2M8 343 aa13.31□□□□□ -0.28
VEGFA-219ENST00000518824 BBS12Q6ZW61 710 aa13.31□□□□□ -0.28
VEGFA-219ENST00000518824 USP45Q70EL2 814 aa13.31□□□□□ -0.28
VEGFA-219ENST00000518824 RD3Q7Z3Z2 195 aa13.31□□□□□ -0.28
VEGFA-219ENST00000518824 HID1Q8IV36 788 aa13.31□□□□□ -0.28
VEGFA-219ENST00000518824 SFTPA2Q8IWL1 248 aa13.31□□□□□ -0.28
VEGFA-219ENST00000518824 TFB1MQ8WVM0 346 aaKnown RBP13.31□□□□□ -0.28
VEGFA-219ENST00000518824 OR1E3Q8WZA6 343 aa13.31□□□□□ -0.28
VEGFA-219ENST00000518824 GATA6Q92908 595 aa13.31□□□□□ -0.28
VEGFA-219ENST00000518824 SCAMP4Q969E2 229 aa13.31□□□□□ -0.28
VEGFA-219ENST00000518824 EID2BQ96D98 161 aa13.31□□□□□ -0.28
VEGFA-219ENST00000518824 NUS1Q96E22 293 aa13.31□□□□□ -0.28
VEGFA-219ENST00000518824 IMP4Q96G21 291 aaKnown RBP13.31□□□□□ -0.28
VEGFA-219ENST00000518824 RBM41Q96IZ5 413 aaKnown RBP13.31□□□□□ -0.28
VEGFA-219ENST00000518824 APOLD1Q96LR9 279 aa13.31□□□□□ -0.28
VEGFA-219ENST00000518824 WDR24Q96S15 920 aa13.31□□□□□ -0.28
VEGFA-219ENST00000518824 ABCG8Q9H221 673 aa13.31□□□□□ -0.28
VEGFA-219ENST00000518824 GLOD4Q9HC38 313 aa13.31□□□□□ -0.28
VEGFA-219ENST00000518824 FGF22Q9HCT0 170 aa13.31□□□□□ -0.28
VEGFA-219ENST00000518824 APOBEC3BQ9UH17 382 aaKnown RBP13.31□□□□□ -0.28
VEGFA-219ENST00000518824 CHD8Q9HCK8 2581 aa13.31□□□□□ -0.28
VEGFA-219ENST00000518824 TPRP12270 2363 aaKnown RBP13.3□□□□□ -0.28
VEGFA-219ENST00000518824 GOLGA4Q13439 2230 aaKnown RBP13.3□□□□□ -0.28
VEGFA-219ENST00000518824 CAPN8A6NHC0 703 aa13.3□□□□□ -0.28
VEGFA-219ENST00000518824 AQP9O43315 295 aa13.3□□□□□ -0.28
VEGFA-219ENST00000518824 TSHRP16473 764 aa13.3□□□□□ -0.28
VEGFA-219ENST00000518824 NFKB1P19838 968 aa13.3□□□□□ -0.28
VEGFA-219ENST00000518824 RBL1P28749 1068 aa13.3□□□□□ -0.28
VEGFA-219ENST00000518824 TRIM23P36406 574 aa13.3□□□□□ -0.28
VEGFA-219ENST00000518824 STC1P52823 247 aa13.3□□□□□ -0.28
VEGFA-219ENST00000518824 EPHB1P54762 984 aa13.3□□□□□ -0.28
VEGFA-219ENST00000518824 OTUD4Q01804 1114 aaKnown RBP13.3□□□□□ -0.28
VEGFA-219ENST00000518824 PPARDQ03181 441 aa13.3□□□□□ -0.28
VEGFA-219ENST00000518824 KIF5AQ12840 1032 aa13.3□□□□□ -0.28
VEGFA-219ENST00000518824 ARHGEF7Q14155 803 aa13.3□□□□□ -0.28
VEGFA-219ENST00000518824 PTK2BQ14289 1009 aa13.3□□□□□ -0.28
VEGFA-219ENST00000518824 PCSK7Q16549 785 aa13.3□□□□□ -0.28
VEGFA-219ENST00000518824 ZNF567Q8N184 647 aa13.3□□□□□ -0.28
VEGFA-219ENST00000518824 ACTL9Q8TC94 416 aa13.3□□□□□ -0.28
VEGFA-219ENST00000518824 P3H4Q92791 437 aa13.3□□□□□ -0.28
VEGFA-219ENST00000518824 TEKT5Q96M29 485 aa13.3□□□□□ -0.28
VEGFA-219ENST00000518824 WDR92Q96MX6 357 aa13.3□□□□□ -0.28
VEGFA-219ENST00000518824 QKIQ96PU8 341 aaKnown RBP eCLIP13.3□□□□□ -0.28
VEGFA-219ENST00000518824 GORASP1Q9BQQ3 440 aa13.3□□□□□ -0.28
VEGFA-219ENST00000518824 ANP32EQ9BTT0 268 aa13.3□□□□□ -0.28
VEGFA-219ENST00000518824 OSBPL8Q9BZF1 889 aa13.3□□□□□ -0.28
VEGFA-219ENST00000518824 SLC25A51Q9H1U9 297 aa13.3□□□□□ -0.28
VEGFA-219ENST00000518824 AMFRQ9UKV5 643 aa13.3□□□□□ -0.28
VEGFA-219ENST00000518824 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.3□□□□□ -0.28
VEGFA-219ENST00000518824 FRYQ5TBA9 3013 aa13.3□□□□□ -0.28
VEGFA-219ENST00000518824 MYLKQ15746 1914 aa13.29□□□□□ -0.28
VEGFA-219ENST00000518824 TCRBV7S2A1N4TA0A589 114 aa13.29□□□□□ -0.28
VEGFA-219ENST00000518824 CCDC66A2RUB6 948 aa13.29□□□□□ -0.28
VEGFA-219ENST00000518824 GOLGA6CA6NDK9 693 aa13.29□□□□□ -0.28
VEGFA-219ENST00000518824 GOLGA6BA6NDN3 693 aa13.29□□□□□ -0.28
VEGFA-219ENST00000518824 ANKRD66B4E2M5 251 aa13.29□□□□□ -0.28
VEGFA-219ENST00000518824 YY2O15391 372 aa13.29□□□□□ -0.28
VEGFA-219ENST00000518824 PMPCBO75439 489 aa13.29□□□□□ -0.28
VEGFA-219ENST00000518824 TRIM16O95361 564 aa13.29□□□□□ -0.28
VEGFA-219ENST00000518824 GOLGA6DP0CG33 693 aa13.29□□□□□ -0.28
VEGFA-219ENST00000518824 CKMT2P17540 419 aa13.29□□□□□ -0.28
VEGFA-219ENST00000518824 CES1P23141 567 aa13.29□□□□□ -0.28
VEGFA-219ENST00000518824 POLD2P49005 469 aa13.29□□□□□ -0.28
VEGFA-219ENST00000518824 HK3P52790 923 aa13.29□□□□□ -0.28
VEGFA-219ENST00000518824 RWDD2BP57060 319 aa13.29□□□□□ -0.28
VEGFA-219ENST00000518824 SRP54P61011 504 aaKnown RBP13.29□□□□□ -0.28
VEGFA-219ENST00000518824 CCZ1BP86790 482 aa13.29□□□□□ -0.28
VEGFA-219ENST00000518824 CCZ1P86791 482 aaPredicted RBP13.29□□□□□ -0.28
VEGFA-219ENST00000518824 KDELC1Q6UW63 502 aa13.29□□□□□ -0.28
VEGFA-219ENST00000518824 LYSMD3Q7Z3D4 306 aa13.29□□□□□ -0.28
VEGFA-219ENST00000518824 PEX26Q7Z412 305 aa13.29□□□□□ -0.28
VEGFA-219ENST00000518824 TRIM74Q86UV6 250 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms