RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 CCDC134Q9H6E4 229 aa0.36□□□□□ -2.35
SCARNA23-201ENST00000516060 UPB1Q9UBR1 384 aa0.36□□□□□ -2.35
SCARNA23-201ENST00000516060 LIMA1Q9UHB6 759 aaKnown RBP0.36□□□□□ -2.35
SCARNA23-201ENST00000516060 TNNQ9UQP3 1299 aa0.36□□□□□ -2.35
SCARNA23-201ENST00000516060 VSIG4Q9Y279 399 aa0.36□□□□□ -2.35
SCARNA23-201ENST00000516060 ANKRD6Q9Y2G4 727 aa0.36□□□□□ -2.35
SCARNA23-201ENST00000516060 TBX22Q9Y458 520 aa0.36□□□□□ -2.35
SCARNA23-201ENST00000516060 HCFC1P51610 2035 aa0.36□□□□□ -2.35
SCARNA23-201ENST00000516060 ITGB4P16144 1822 aa0.36□□□□□ -2.35
SCARNA23-201ENST00000516060 NPIPB13A6NJU9 1138 aa0.35□□□□□ -2.35
SCARNA23-201ENST00000516060 E9PSI1 815 aa0.35□□□□□ -2.35
SCARNA23-201ENST00000516060 LATO43561 262 aa0.35□□□□□ -2.35
SCARNA23-201ENST00000516060 RGS11O94810 467 aa0.35□□□□□ -2.35
SCARNA23-201ENST00000516060 ITGA2BP08514 1039 aa0.35□□□□□ -2.35
SCARNA23-201ENST00000516060 IGHV4-38-2P0DP08 117 aa0.35□□□□□ -2.35
SCARNA23-201ENST00000516060 ATP6V1B1P15313 513 aa0.35□□□□□ -2.35
SCARNA23-201ENST00000516060 GABRB3P28472 473 aa0.35□□□□□ -2.35
SCARNA23-201ENST00000516060 TTKP33981 857 aa0.35□□□□□ -2.35
SCARNA23-201ENST00000516060 WNT5AP41221 380 aa0.35□□□□□ -2.35
SCARNA23-201ENST00000516060 SKIV2L2P42285 1042 aaKnown RBP0.35□□□□□ -2.35
SCARNA23-201ENST00000516060 CENPAP49450 140 aa0.35□□□□□ -2.35
SCARNA23-201ENST00000516060 SLC18A2Q05940 514 aa0.35□□□□□ -2.35
SCARNA23-201ENST00000516060 NFATC2Q13469 925 aa0.35□□□□□ -2.35
SCARNA23-201ENST00000516060 FAM50AQ14320 339 aaKnown RBP0.35□□□□□ -2.35
SCARNA23-201ENST00000516060 ZNF234Q14588 700 aa0.35□□□□□ -2.35
SCARNA23-201ENST00000516060 SAFBQ15424 915 aaKnown RBP eCLIP0.35□□□□□ -2.35
SCARNA23-201ENST00000516060 CTF1Q16619 201 aa0.35□□□□□ -2.35
SCARNA23-201ENST00000516060 HERC4Q5GLZ8 1057 aaPredicted RBP0.35□□□□□ -2.35
SCARNA23-201ENST00000516060 IL27RAQ6UWB1 636 aa0.35□□□□□ -2.35
SCARNA23-201ENST00000516060 SERINC5Q86VE9 423 aa0.35□□□□□ -2.35
SCARNA23-201ENST00000516060 C11orf42Q8N5U0 333 aa0.35□□□□□ -2.35
SCARNA23-201ENST00000516060 TYMSOSQ8TAI1 123 aa0.35□□□□□ -2.35
SCARNA23-201ENST00000516060 RSC1A1Q92681 617 aa0.35□□□□□ -2.35
SCARNA23-201ENST00000516060 SEMA4DQ92854 862 aa0.35□□□□□ -2.35
SCARNA23-201ENST00000516060 IQCDQ96DY2 449 aa0.35□□□□□ -2.35
SCARNA23-201ENST00000516060 STRBPQ96SI9 672 aaKnown RBP0.35□□□□□ -2.35
SCARNA23-201ENST00000516060 ASPSCR1Q9BZE9 553 aa0.35□□□□□ -2.35
SCARNA23-201ENST00000516060 NUDT4Q9NZJ9 180 aa0.35□□□□□ -2.35
SCARNA23-201ENST00000516060 ACSL5Q9ULC5 683 aa0.35□□□□□ -2.35
SCARNA23-201ENST00000516060 A0A087WUV0 522 aaPredicted RBP0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 KIR2DL5BA0A0G2JN68 375 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 KIR2DL5BA0A0G2JPC4 375 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 ANO9A1A5B4 782 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 GOLGA6L9A6NEM1 432 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 AGAP5A6NIR3 686 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 MAGEB17A8MXT2 336 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 KPNA7A9QM74 516 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 ZNHIT1O43257 154 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 RPP40O75818 363 aaKnown RBP0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 NDUFB4O95168 129 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 RAF1P04049 648 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 NR3C1P04150 777 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 ZSCAN5DPP0CG00 497 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 TFPIP10646 304 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 HSPA6P17066 643 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 ITGA3P26006 1051 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 HSD3B2P26439 372 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 NR2C2P49116 596 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 RCAN1P53805 252 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 UCNP55089 124 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 HDAC4P56524 1084 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 KCNJ10P78508 379 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 PDE1BQ01064 536 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 CDK18Q07002 472 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 ALKBH1Q13686 389 aaKnown RBP0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 GXYLT1Q4G148 440 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 OR7E24Q6IFN5 339 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 SLC47A2Q86VL8 602 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 SCN4BQ8IWT1 228 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 KIR2DL5AQ8N109 375 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 CCDC150Q8NCX0 1101 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 ZMIZ2Q8NF64 920 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 C1orf147Q96MC9 270 aaPredicted RBP0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 NEURL2Q9BR09 285 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 MECRQ9BV79 373 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 UPF3AQ9H1J1 476 aaKnown RBP0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 GNB4Q9HAV0 340 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 NMRK2Q9NPI5 230 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 CNGB3Q9NQW8 809 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 DIAPH3Q9NSV4 1193 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 SPATS2LQ9NUQ6 558 aaKnown RBP0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 NLKQ9UBE8 527 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 POLG2Q9UHN1 485 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 EXO1Q9UQ84 846 aaKnown RBP0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 FAM205AQ6ZU69 1335 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 WASHC2CQ9Y4E1 1318 aa0.34□□□□□ -2.36
SCARNA23-201ENST00000516060 ACOD1A6NK06 481 aa0.33□□□□□ -2.36
SCARNA23-201ENST00000516060 SLC38A8A6NNN8 435 aa0.33□□□□□ -2.36
SCARNA23-201ENST00000516060 C17orf100A8MU93 164 aa0.33□□□□□ -2.36
SCARNA23-201ENST00000516060 GRM8O00222 908 aa0.33□□□□□ -2.36
SCARNA23-201ENST00000516060 HNRNPDLO14979 420 aaKnown RBP0.33□□□□□ -2.36
SCARNA23-201ENST00000516060 SLC25A17O43808 307 aa0.33□□□□□ -2.36
SCARNA23-201ENST00000516060 GPRIN2O60269 458 aa0.33□□□□□ -2.36
SCARNA23-201ENST00000516060 PROS1P07225 676 aa0.33□□□□□ -2.36
SCARNA23-201ENST00000516060 P0C879 139 aa0.33□□□□□ -2.36
SCARNA23-201ENST00000516060 ITGAXP20702 1163 aa0.33□□□□□ -2.36
SCARNA23-201ENST00000516060 CDK11BP21127 795 aaKnown RBP0.33□□□□□ -2.36
SCARNA23-201ENST00000516060 IL4RP24394 825 aa0.33□□□□□ -2.36
SCARNA23-201ENST00000516060 PIK3R1P27986 724 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms