RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 ETV3P41162 512 aa13.67□□□□□ -0.22
TCOF1-215ENST00000515516 PCBP4P57723 403 aaKnown RBP13.67□□□□□ -0.22
TCOF1-215ENST00000515516 ERVPABLB-1P60509 514 aa13.67□□□□□ -0.22
TCOF1-215ENST00000515516 CCDC173Q0VFZ6 552 aa13.67□□□□□ -0.22
TCOF1-215ENST00000515516 C3orf38Q5JPI3 329 aa13.67□□□□□ -0.22
TCOF1-215ENST00000515516 RAET1GQ6H3X3 334 aa13.67□□□□□ -0.22
TCOF1-215ENST00000515516 HSD11B1LQ7Z5J1 315 aa13.67□□□□□ -0.22
TCOF1-215ENST00000515516 ZNF248Q8NDW4 579 aa13.67□□□□□ -0.22
TCOF1-215ENST00000515516 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.67□□□□□ -0.22
TCOF1-215ENST00000515516 CCDC74AQ96AQ1 378 aa13.67□□□□□ -0.22
TCOF1-215ENST00000515516 DTD2Q96FN9 168 aa13.67□□□□□ -0.22
TCOF1-215ENST00000515516 ATXN7L3BQ96GX2 97 aa13.67□□□□□ -0.22
TCOF1-215ENST00000515516 TSGA13Q96PP4 275 aa13.67□□□□□ -0.22
TCOF1-215ENST00000515516 LGMNQ99538 433 aa13.67□□□□□ -0.22
TCOF1-215ENST00000515516 DPEP2Q9H4A9 486 aa13.67□□□□□ -0.22
TCOF1-215ENST00000515516 FGF22Q9HCT0 170 aa13.67□□□□□ -0.22
TCOF1-215ENST00000515516 MRPL40Q9NQ50 206 aaKnown RBP13.67□□□□□ -0.22
TCOF1-215ENST00000515516 ABHD10Q9NUJ1 306 aa13.67□□□□□ -0.22
TCOF1-215ENST00000515516 DNPEPQ9ULA0 475 aa13.67□□□□□ -0.22
TCOF1-215ENST00000515516 CHD6Q8TD26 2715 aa13.67□□□□□ -0.22
TCOF1-215ENST00000515516 PKD1L2Q7Z442 2459 aa13.67□□□□□ -0.22
TCOF1-215ENST00000515516 DOCK9Q9BZ29 2069 aa13.67□□□□□ -0.22
TCOF1-215ENST00000515516 PRSS38A1L453 326 aa13.66□□□□□ -0.22
TCOF1-215ENST00000515516 NPIPB15A6NHN6 443 aaPredicted RBP13.66□□□□□ -0.22
TCOF1-215ENST00000515516 DXOO77932 396 aaKnown RBP13.66□□□□□ -0.22
TCOF1-215ENST00000515516 MAP3K6O95382 1288 aa13.66□□□□□ -0.22
TCOF1-215ENST00000515516 CCNB1P14635 433 aa13.66□□□□□ -0.22
TCOF1-215ENST00000515516 GM2AP17900 193 aa13.66□□□□□ -0.22
TCOF1-215ENST00000515516 KDELR1P24390 212 aa13.66□□□□□ -0.22
TCOF1-215ENST00000515516 ITPKBP27987 946 aa13.66□□□□□ -0.22
TCOF1-215ENST00000515516 ARHGAP25P42331 645 aa13.66□□□□□ -0.22
TCOF1-215ENST00000515516 GPR1P46091 355 aa13.66□□□□□ -0.22
TCOF1-215ENST00000515516 TAS2R40P59535 323 aa13.66□□□□□ -0.22
TCOF1-215ENST00000515516 BIRC2Q13490 618 aa13.66□□□□□ -0.22
TCOF1-215ENST00000515516 PEX6Q13608 980 aa13.66□□□□□ -0.22
TCOF1-215ENST00000515516 ASTE1Q2TB18 679 aaPredicted RBP13.66□□□□□ -0.22
TCOF1-215ENST00000515516 BROXQ5VW32 411 aa13.66□□□□□ -0.22
TCOF1-215ENST00000515516 FOXR1Q6PIV2 292 aa13.66□□□□□ -0.22
TCOF1-215ENST00000515516 HEATR4Q86WZ0 1026 aa13.66□□□□□ -0.22
TCOF1-215ENST00000515516 VSTM4Q8IW00 320 aa13.66□□□□□ -0.22
TCOF1-215ENST00000515516 RHOT2Q8IXI1 618 aa13.66□□□□□ -0.22
TCOF1-215ENST00000515516 RNF214Q8ND24 703 aa13.66□□□□□ -0.22
TCOF1-215ENST00000515516 SLC35G2Q8TBE7 412 aa13.66□□□□□ -0.22
TCOF1-215ENST00000515516 KIAA1524Q8TCG1 905 aa13.66□□□□□ -0.22
TCOF1-215ENST00000515516 PIH1D2Q8WWB5 315 aa13.66□□□□□ -0.22
TCOF1-215ENST00000515516 MAML1Q92585 1016 aa13.66□□□□□ -0.22
TCOF1-215ENST00000515516 FATE1Q969F0 183 aa13.66□□□□□ -0.22
TCOF1-215ENST00000515516 GFM1Q96RP9 751 aaKnown RBP13.66□□□□□ -0.22
TCOF1-215ENST00000515516 MCCC1Q96RQ3 725 aaPredicted RBP13.66□□□□□ -0.22
TCOF1-215ENST00000515516 LGR4Q9BXB1 951 aa13.66□□□□□ -0.22
TCOF1-215ENST00000515516 GSDMCQ9BYG8 508 aa13.66□□□□□ -0.22
TCOF1-215ENST00000515516 STRADBQ9C0K7 418 aa13.66□□□□□ -0.22
TCOF1-215ENST00000515516 TMEM168Q9H0V1 697 aa13.66□□□□□ -0.22
TCOF1-215ENST00000515516 SUDS3Q9H7L9 328 aaPredicted RBP13.66□□□□□ -0.22
TCOF1-215ENST00000515516 NHEJ1Q9H9Q4 299 aaPredicted RBP13.66□□□□□ -0.22
TCOF1-215ENST00000515516 CARS2Q9HA77 564 aaKnown RBP13.66□□□□□ -0.22
TCOF1-215ENST00000515516 SATB2Q9UPW6 733 aa13.66□□□□□ -0.22
TCOF1-215ENST00000515516 PPIL1Q9Y3C6 166 aa13.66□□□□□ -0.22
TCOF1-215ENST00000515516 ENTPD2Q9Y5L3 495 aa13.66□□□□□ -0.22
TCOF1-215ENST00000515516 GOLGA4Q13439 2230 aaKnown RBP13.66□□□□□ -0.22
TCOF1-215ENST00000515516 CFAP47Q6ZTR5 3102 aa13.65□□□□□ -0.22
TCOF1-215ENST00000515516 LRRD1A4D1F6 860 aa13.65□□□□□ -0.22
TCOF1-215ENST00000515516 B4DGG1 531 aa13.65□□□□□ -0.22
TCOF1-215ENST00000515516 ZW10O43264 779 aa13.65□□□□□ -0.22
TCOF1-215ENST00000515516 MFAP3LO75121 409 aa13.65□□□□□ -0.22
TCOF1-215ENST00000515516 RPLP0P05388 317 aaKnown RBP13.65□□□□□ -0.22
TCOF1-215ENST00000515516 PYGLP06737 847 aa13.65□□□□□ -0.22
TCOF1-215ENST00000515516 GLB1P16278 677 aa13.65□□□□□ -0.22
TCOF1-215ENST00000515516 ZNF30P17039 623 aa13.65□□□□□ -0.22
TCOF1-215ENST00000515516 LHCGRP22888 699 aa13.65□□□□□ -0.22
TCOF1-215ENST00000515516 TEAD1P28347 426 aa13.65□□□□□ -0.22
TCOF1-215ENST00000515516 CCL7P80098 99 aa13.65□□□□□ -0.22
TCOF1-215ENST00000515516 DSC2Q02487 901 aa13.65□□□□□ -0.22
TCOF1-215ENST00000515516 GBE1Q04446 702 aa13.65□□□□□ -0.22
TCOF1-215ENST00000515516 ILF3Q12906 894 aaKnown RBP eCLIP13.65□□□□□ -0.22
TCOF1-215ENST00000515516 OGFOD3Q6PK18 319 aa13.65□□□□□ -0.22
TCOF1-215ENST00000515516 NYAP1Q6ZVC0 841 aa13.65□□□□□ -0.22
TCOF1-215ENST00000515516 Q6ZVL8 140 aa13.65□□□□□ -0.22
TCOF1-215ENST00000515516 TSPAN33Q86UF1 283 aa13.65□□□□□ -0.22
TCOF1-215ENST00000515516 CPNE8Q86YQ8 564 aa13.65□□□□□ -0.22
TCOF1-215ENST00000515516 CNGA4Q8IV77 575 aa13.65□□□□□ -0.22
TCOF1-215ENST00000515516 CCDC13Q8IYE1 715 aa13.65□□□□□ -0.22
TCOF1-215ENST00000515516 CBARPQ8N350 705 aaPredicted RBP13.65□□□□□ -0.22
TCOF1-215ENST00000515516 ARL14Q8N4G2 192 aa13.65□□□□□ -0.22
TCOF1-215ENST00000515516 Q8N9G6 341 aaPredicted RBP13.65□□□□□ -0.22
TCOF1-215ENST00000515516 GPR156Q8NFN8 814 aa13.65□□□□□ -0.22
TCOF1-215ENST00000515516 WDR36Q8NI36 951 aaKnown RBP13.65□□□□□ -0.22
TCOF1-215ENST00000515516 RAPGEF5Q92565 580 aa13.65□□□□□ -0.22
TCOF1-215ENST00000515516 FAF2Q96CS3 445 aa13.65□□□□□ -0.22
TCOF1-215ENST00000515516 NAF1Q96HR8 494 aaKnown RBP13.65□□□□□ -0.22
TCOF1-215ENST00000515516 RNF157Q96PX1 679 aa13.65□□□□□ -0.22
TCOF1-215ENST00000515516 TEX101Q9BY14 249 aa13.65□□□□□ -0.22
TCOF1-215ENST00000515516 CHKBQ9Y259 395 aa13.65□□□□□ -0.22
TCOF1-215ENST00000515516 WDFY3Q8IZQ1 3526 aa13.65□□□□□ -0.22
TCOF1-215ENST00000515516 ZZEF1O43149 2961 aa13.65□□□□□ -0.22
TCOF1-215ENST00000515516 CCDC187A0A096LP49 1063 aa13.64□□□□□ -0.23
TCOF1-215ENST00000515516 A0A0J9YYE9 177 aa13.64□□□□□ -0.23
TCOF1-215ENST00000515516 AKR1B15C9JRZ8 316 aaPredicted RBP13.64□□□□□ -0.23
TCOF1-215ENST00000515516 NTN3O00634 580 aaPredicted RBP13.64□□□□□ -0.23
TCOF1-215ENST00000515516 APOL1O14791 398 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms