RNA–Protein interactions for RNA: ENST00000514627.5

YIPF3-217, Transcript of Yip1 domain family member 3, humanhuman

TSL 3

Gene YIPF3, Length 854 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-217ENST00000514627 RABGEF1Q9UJ41 708 aa12.55□□□□□ -0.4
YIPF3-217ENST00000514627 ACSL6Q9UKU0 697 aa12.55□□□□□ -0.4
YIPF3-217ENST00000514627 BZW2Q9Y6E2 419 aaKnown RBP12.55□□□□□ -0.4
YIPF3-217ENST00000514627 AHCTF1Q8WYP5 2266 aa12.54□□□□□ -0.4
YIPF3-217ENST00000514627 K7ENP7 123 aa12.54□□□□□ -0.4
YIPF3-217ENST00000514627 PSMD11O00231 422 aa12.54□□□□□ -0.4
YIPF3-217ENST00000514627 NUDT21O43809 227 aaKnown RBP12.54□□□□□ -0.4
YIPF3-217ENST00000514627 PEX11BO96011 259 aa12.54□□□□□ -0.4
YIPF3-217ENST00000514627 GM2AP17900 193 aa12.54□□□□□ -0.4
YIPF3-217ENST00000514627 CR2P20023 1033 aa12.54□□□□□ -0.4
YIPF3-217ENST00000514627 TEAD1P28347 426 aa12.54□□□□□ -0.4
YIPF3-217ENST00000514627 UGT1A5P35504 534 aa12.54□□□□□ -0.4
YIPF3-217ENST00000514627 CDH6P55285 790 aa12.54□□□□□ -0.4
YIPF3-217ENST00000514627 PEX6Q13608 980 aa12.54□□□□□ -0.4
YIPF3-217ENST00000514627 C14orf28Q4W4Y0 310 aa12.54□□□□□ -0.4
YIPF3-217ENST00000514627 INO80CQ6PI98 192 aaPredicted RBP12.54□□□□□ -0.4
YIPF3-217ENST00000514627 CCDC81Q6ZN84 652 aa12.54□□□□□ -0.4
YIPF3-217ENST00000514627 POLNQ7Z5Q5 900 aa12.54□□□□□ -0.4
YIPF3-217ENST00000514627 ZNF605Q86T29 641 aa12.54□□□□□ -0.4
YIPF3-217ENST00000514627 CCNJLQ8IV13 435 aa12.54□□□□□ -0.4
YIPF3-217ENST00000514627 CBARPQ8N350 705 aaPredicted RBP12.54□□□□□ -0.4
YIPF3-217ENST00000514627 KIAA1524Q8TCG1 905 aa12.54□□□□□ -0.4
YIPF3-217ENST00000514627 NSMCE1Q8WV22 266 aa12.54□□□□□ -0.4
YIPF3-217ENST00000514627 TEKT4Q8WW24 435 aa12.54□□□□□ -0.4
YIPF3-217ENST00000514627 TMEM168Q9H0V1 697 aa12.54□□□□□ -0.4
YIPF3-217ENST00000514627 EPB41L5Q9HCM4 733 aa12.54□□□□□ -0.4
YIPF3-217ENST00000514627 CYP4F12Q9HCS2 524 aa12.54□□□□□ -0.4
YIPF3-217ENST00000514627 PHPT1Q9NRX4 125 aaPredicted RBP12.54□□□□□ -0.4
YIPF3-217ENST00000514627 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.54□□□□□ -0.4
YIPF3-217ENST00000514627 B4GALT6Q9UBX8 382 aa12.54□□□□□ -0.4
YIPF3-217ENST00000514627 PHTF1Q9UMS5 762 aa12.54□□□□□ -0.4
YIPF3-217ENST00000514627 SHROOM3Q8TF72 1996 aa12.53□□□□□ -0.4
YIPF3-217ENST00000514627 PMS2P1A4D2B8 440 aa12.53□□□□□ -0.4
YIPF3-217ENST00000514627 CASC3O15234 703 aaKnown RBP12.53□□□□□ -0.4
YIPF3-217ENST00000514627 NVLO15381 856 aaKnown RBP12.53□□□□□ -0.4
YIPF3-217ENST00000514627 ZW10O43264 779 aa12.53□□□□□ -0.4
YIPF3-217ENST00000514627 NOBOXO60393 691 aa12.53□□□□□ -0.4
YIPF3-217ENST00000514627 MAFKO60675 156 aa12.53□□□□□ -0.4
YIPF3-217ENST00000514627 HEXIM1O94992 359 aaKnown RBP12.53□□□□□ -0.4
YIPF3-217ENST00000514627 CYP2A6P11509 494 aaPredicted RBP12.53□□□□□ -0.4
YIPF3-217ENST00000514627 MYCLP1P12525 358 aaPredicted RBP12.53□□□□□ -0.4
YIPF3-217ENST00000514627 KRT10P13645 584 aa12.53□□□□□ -0.4
YIPF3-217ENST00000514627 AMPD1P23109 780 aa12.53□□□□□ -0.4
YIPF3-217ENST00000514627 IL1R2P27930 398 aa12.53□□□□□ -0.4
YIPF3-217ENST00000514627 VIPR1P32241 457 aa12.53□□□□□ -0.4
YIPF3-217ENST00000514627 SERPINB6P35237 376 aa12.53□□□□□ -0.4
YIPF3-217ENST00000514627 ZFP36L1Q07352 338 aaKnown RBP12.53□□□□□ -0.4
YIPF3-217ENST00000514627 CLN3Q13286 438 aa12.53□□□□□ -0.4
YIPF3-217ENST00000514627 ARHGEF7Q14155 803 aa12.53□□□□□ -0.4
YIPF3-217ENST00000514627 HLTFQ14527 1009 aaKnown RBP eCLIP12.53□□□□□ -0.4
YIPF3-217ENST00000514627 TCEA2Q15560 299 aa12.53□□□□□ -0.4
YIPF3-217ENST00000514627 CLPPQ16740 277 aaPredicted RBP12.53□□□□□ -0.4
YIPF3-217ENST00000514627 MARC1Q5VT66 337 aa12.53□□□□□ -0.4
YIPF3-217ENST00000514627 E4F1Q66K89 784 aaPredicted RBP12.53□□□□□ -0.4
YIPF3-217ENST00000514627 KCTD16Q68DU8 428 aa12.53□□□□□ -0.4
YIPF3-217ENST00000514627 B3GNT8Q7Z7M8 397 aa12.53□□□□□ -0.4
YIPF3-217ENST00000514627 NIPA2Q8N8Q9 360 aa12.53□□□□□ -0.4
YIPF3-217ENST00000514627 GPBAR1Q8TDU6 330 aa12.53□□□□□ -0.4
YIPF3-217ENST00000514627 TTC9Q92623 222 aa12.53□□□□□ -0.4
YIPF3-217ENST00000514627 SYN2Q92777 582 aaPredicted RBP12.53□□□□□ -0.4
YIPF3-217ENST00000514627 NUS1Q96E22 293 aa12.53□□□□□ -0.4
YIPF3-217ENST00000514627 SCRN2Q96FV2 425 aa12.53□□□□□ -0.4
YIPF3-217ENST00000514627 NSMCE3Q96MG7 304 aa12.53□□□□□ -0.4
YIPF3-217ENST00000514627 CSPG4P5Q96PW8 444 aa12.53□□□□□ -0.4
YIPF3-217ENST00000514627 CCNL2Q96S94 520 aaPredicted RBP12.53□□□□□ -0.4
YIPF3-217ENST00000514627 MGME1Q9BQP7 344 aa12.53□□□□□ -0.4
YIPF3-217ENST00000514627 LGR4Q9BXB1 951 aa12.53□□□□□ -0.4
YIPF3-217ENST00000514627 TEX101Q9BY14 249 aa12.53□□□□□ -0.4
YIPF3-217ENST00000514627 DPEP2Q9H4A9 486 aa12.53□□□□□ -0.4
YIPF3-217ENST00000514627 NOD2Q9HC29 1040 aa12.53□□□□□ -0.4
YIPF3-217ENST00000514627 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.53□□□□□ -0.4
YIPF3-217ENST00000514627 TRNAU1APQ9NX07 287 aaKnown RBP12.53□□□□□ -0.4
YIPF3-217ENST00000514627 RCOR3Q9P2K3 495 aaPredicted RBP12.53□□□□□ -0.4
YIPF3-217ENST00000514627 LRIT1Q9P2V4 623 aa12.53□□□□□ -0.4
YIPF3-217ENST00000514627 IMPACTQ9P2X3 320 aa12.53□□□□□ -0.4
YIPF3-217ENST00000514627 MYO1AQ9UBC5 1043 aa12.53□□□□□ -0.4
YIPF3-217ENST00000514627 ATXN7L1Q9ULK2 861 aaPredicted RBP12.53□□□□□ -0.4
YIPF3-217ENST00000514627 PCDHGC4Q9Y5F7 938 aa12.53□□□□□ -0.4
YIPF3-217ENST00000514627 PRSS38A1L453 326 aa12.52□□□□□ -0.41
YIPF3-217ENST00000514627 A8MX80 341 aa12.52□□□□□ -0.41
YIPF3-217ENST00000514627 GOLGA6L6A8MZA4 724 aa12.52□□□□□ -0.41
YIPF3-217ENST00000514627 CPP00450 1065 aa12.52□□□□□ -0.41
YIPF3-217ENST00000514627 GYPCP04921 128 aa12.52□□□□□ -0.41
YIPF3-217ENST00000514627 PTMAP06454 111 aaKnown RBP12.52□□□□□ -0.41
YIPF3-217ENST00000514627 JMJD7P0C870 316 aa12.52□□□□□ -0.41
YIPF3-217ENST00000514627 RARAP10276 462 aa12.52□□□□□ -0.41
YIPF3-217ENST00000514627 SKILP12757 684 aa12.52□□□□□ -0.41
YIPF3-217ENST00000514627 CCNB1P14635 433 aa12.52□□□□□ -0.41
YIPF3-217ENST00000514627 SLC5A2P31639 672 aa12.52□□□□□ -0.41
YIPF3-217ENST00000514627 DPTQ07507 201 aa12.52□□□□□ -0.41
YIPF3-217ENST00000514627 ILF3Q12906 894 aaKnown RBP eCLIP12.52□□□□□ -0.41
YIPF3-217ENST00000514627 CNGA3Q16281 694 aa12.52□□□□□ -0.41
YIPF3-217ENST00000514627 NYAP1Q6ZVC0 841 aa12.52□□□□□ -0.41
YIPF3-217ENST00000514627 SPRED1Q7Z699 444 aa12.52□□□□□ -0.41
YIPF3-217ENST00000514627 C17orf82Q86X59 251 aaPredicted RBP12.52□□□□□ -0.41
YIPF3-217ENST00000514627 TP53INP2Q8IXH6 220 aa12.52□□□□□ -0.41
YIPF3-217ENST00000514627 NDUFAF2Q8N183 169 aa12.52□□□□□ -0.41
YIPF3-217ENST00000514627 ATPAF2Q8N5M1 289 aa12.52□□□□□ -0.41
YIPF3-217ENST00000514627 Q8N9G6 341 aaPredicted RBP12.52□□□□□ -0.41
YIPF3-217ENST00000514627 PDCD6IPQ8WUM4 868 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms