RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 LYSMD3Q7Z3D4 306 aa12.86□□□□□ -0.35
PVT1-203ENST00000513868 SPNS2Q8IVW8 549 aa12.86□□□□□ -0.35
PVT1-203ENST00000513868 PLPP6Q8IY26 295 aa12.86□□□□□ -0.35
PVT1-203ENST00000513868 TDHQ8IZJ6 230 aa12.86□□□□□ -0.35
PVT1-203ENST00000513868 CACNA2D3Q8IZS8 1091 aa12.86□□□□□ -0.35
PVT1-203ENST00000513868 CENPLQ8N0S6 344 aaPredicted RBP12.86□□□□□ -0.35
PVT1-203ENST00000513868 OR2A12Q8NGT7 310 aa12.86□□□□□ -0.35
PVT1-203ENST00000513868 GABPB2Q8TAK5 448 aaPredicted RBP12.86□□□□□ -0.35
PVT1-203ENST00000513868 FRS2Q8WU20 508 aa12.86□□□□□ -0.35
PVT1-203ENST00000513868 PPP2R3CQ969Q6 453 aa12.86□□□□□ -0.35
PVT1-203ENST00000513868 ELMO2Q96JJ3 720 aa12.86□□□□□ -0.35
PVT1-203ENST00000513868 GPR78Q96P69 363 aa12.86□□□□□ -0.35
PVT1-203ENST00000513868 TUBGCP5Q96RT8 1024 aa12.86□□□□□ -0.35
PVT1-203ENST00000513868 NDNQ99608 321 aa12.86□□□□□ -0.35
PVT1-203ENST00000513868 OLFM1Q99784 485 aa12.86□□□□□ -0.35
PVT1-203ENST00000513868 EBF3Q9H4W6 596 aa12.86□□□□□ -0.35
PVT1-203ENST00000513868 CATSPERZQ9NTU4 200 aa12.86□□□□□ -0.35
PVT1-203ENST00000513868 OBP2AQ9NY56 170 aa12.86□□□□□ -0.35
PVT1-203ENST00000513868 IL17CQ9P0M4 197 aa12.86□□□□□ -0.35
PVT1-203ENST00000513868 ANKRD6Q9Y2G4 727 aa12.86□□□□□ -0.35
PVT1-203ENST00000513868 SLC27A6Q9Y2P4 619 aa12.86□□□□□ -0.35
PVT1-203ENST00000513868 STARD13Q9Y3M8 1113 aa12.86□□□□□ -0.35
PVT1-203ENST00000513868 H7C0S8 307 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 TULP3O75386 442 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 WISP3O95389 354 aaPredicted RBP12.85□□□□□ -0.35
PVT1-203ENST00000513868 ADH1CP00326 375 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 SLC4A1P02730 911 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 STMN1P16949 149 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 SERPINA4P29622 427 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 HNF1BP35680 557 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 HMGCLP35914 325 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 DGKGP49619 791 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 CDKN1CP49918 316 aaPredicted RBP12.85□□□□□ -0.35
PVT1-203ENST00000513868 VASPP50552 380 aaPredicted RBP12.85□□□□□ -0.35
PVT1-203ENST00000513868 STC1P52823 247 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 XIAPP98170 497 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 TIAL1Q01085 375 aaKnown RBP eCLIP12.85□□□□□ -0.353e-6■■■■□ 20.6
PVT1-203ENST00000513868 DLG1Q12959 904 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 ADAM15Q13444 863 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 PEX6Q13608 980 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 PCLAFQ15004 111 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 PTPRNQ16849 979 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 ACCSLQ4AC99 568 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 MRNIPQ6NTE8 343 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 VITQ6UXI7 678 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 Q6ZVU0 165 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 NUDCD3Q8IVD9 361 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 RYBPQ8N488 228 aaPredicted RBP12.85□□□□□ -0.35
PVT1-203ENST00000513868 OTUD6BQ8N6M0 293 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 GPATCH11Q8N954 259 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 CHST14Q8NCH0 376 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 CCDC197Q8NCU1 140 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 CYB5D2Q8WUJ1 264 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 S1PR5Q9H228 398 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 SUV39H2Q9H5I1 410 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 BPIFA1Q9NP55 256 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 HPS4Q9NQG7 708 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 CLEC1BQ9P126 229 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 FKBPLQ9UIM3 349 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 CDH7Q9ULB5 785 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 PPIL1Q9Y3C6 166 aa12.85□□□□□ -0.35
PVT1-203ENST00000513868 WASH3PC4AMC7 463 aa12.84□□□□□ -0.35
PVT1-203ENST00000513868 STX7O15400 261 aaKnown RBP12.84□□□□□ -0.35
PVT1-203ENST00000513868 DNAJC6O75061 913 aa12.84□□□□□ -0.35
PVT1-203ENST00000513868 POP4O95707 220 aaKnown RBP12.84□□□□□ -0.35
PVT1-203ENST00000513868 IL1BP01584 269 aa12.84□□□□□ -0.35
PVT1-203ENST00000513868 SBK3P0C264 359 aa12.84□□□□□ -0.35
PVT1-203ENST00000513868 COL6A2P12110 1019 aa12.84□□□□□ -0.35
PVT1-203ENST00000513868 SP100P23497 879 aaPredicted RBP12.84□□□□□ -0.35
PVT1-203ENST00000513868 CRABP2P29373 138 aa12.84□□□□□ -0.35
PVT1-203ENST00000513868 ALDH3A1P30838 453 aa12.84□□□□□ -0.35
PVT1-203ENST00000513868 SLC6A11P48066 632 aa12.84□□□□□ -0.35
PVT1-203ENST00000513868 CDKN2DP55273 166 aa12.84□□□□□ -0.35
PVT1-203ENST00000513868 ITIH4Q14624 930 aa12.84□□□□□ -0.35
PVT1-203ENST00000513868 DBN1Q16643 649 aa12.84□□□□□ -0.35
PVT1-203ENST00000513868 CCDC153Q494R4 210 aa12.84□□□□□ -0.35
PVT1-203ENST00000513868 FASTKD1Q53R41 847 aaKnown RBP12.84□□□□□ -0.35
PVT1-203ENST00000513868 HECTD2Q5U5R9 776 aa12.84□□□□□ -0.35
PVT1-203ENST00000513868 AFTPHQ6ULP2 937 aa12.84□□□□□ -0.35
PVT1-203ENST00000513868 RAPH1Q70E73 1250 aa12.84□□□□□ -0.35
PVT1-203ENST00000513868 SPATA21Q7Z572 469 aa12.84□□□□□ -0.35
PVT1-203ENST00000513868 KCTD4Q8WVF5 259 aa12.84□□□□□ -0.35
PVT1-203ENST00000513868 GRAMD1AQ96CP6 724 aa12.84□□□□□ -0.35
PVT1-203ENST00000513868 LYSMD1Q96S90 227 aa12.84□□□□□ -0.35
PVT1-203ENST00000513868 PLA2G2FQ9BZM2 168 aa12.84□□□□□ -0.35
PVT1-203ENST00000513868 COPG2Q9UBF2 871 aa12.84□□□□□ -0.35
PVT1-203ENST00000513868 TLK1Q9UKI8 766 aa12.84□□□□□ -0.35
PVT1-203ENST00000513868 CRYL1Q9Y2S2 319 aa12.84□□□□□ -0.35
PVT1-203ENST00000513868 ACOT9Q9Y305 439 aa12.84□□□□□ -0.35
PVT1-203ENST00000513868 VWA7Q9Y334 891 aa12.84□□□□□ -0.35
PVT1-203ENST00000513868 USP15Q9Y4E8 981 aaPredicted RBP12.84□□□□□ -0.35
PVT1-203ENST00000513868 ANKRD12Q6UB98 2062 aa12.83□□□□□ -0.35
PVT1-203ENST00000513868 XIRP2A4UGR9 3374 aa12.83□□□□□ -0.35
PVT1-203ENST00000513868 CAPN8A6NHC0 703 aa12.83□□□□□ -0.35
PVT1-203ENST00000513868 TTC34A8MYJ7 566 aa12.83□□□□□ -0.35
PVT1-203ENST00000513868 TARM1B6A8C7 271 aa12.83□□□□□ -0.35
PVT1-203ENST00000513868 G3V2L1 256 aa12.83□□□□□ -0.35
PVT1-203ENST00000513868 BNIP3LO60238 219 aa12.83□□□□□ -0.35
PVT1-203ENST00000513868 NFATC1O95644 943 aa12.83□□□□□ -0.35
PVT1-203ENST00000513868 FGF3P11487 239 aaPredicted RBP12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms