RNA–Protein interactions for RNA: ENST00000513205.5

PPARGC1A-211, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 1,432 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-211ENST00000513205 TLR9Q9NR96 1032 aa8.61□□□□□ -1.03
PPARGC1A-211ENST00000513205 CATSPERZQ9NTU4 200 aa8.61□□□□□ -1.03
PPARGC1A-211ENST00000513205 ZDHHC7Q9NXF8 308 aa8.61□□□□□ -1.03
PPARGC1A-211ENST00000513205 DNMT3BQ9UBC3 853 aaKnown RBP8.61□□□□□ -1.03
PPARGC1A-211ENST00000513205 SLC4A7Q9Y6M7 1214 aa8.61□□□□□ -1.03
PPARGC1A-211ENST00000513205 SHROOM3Q8TF72 1996 aa8.61□□□□□ -1.03
PPARGC1A-211ENST00000513205 ANKRD66B4E2M5 251 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 ZNF197O14709 1029 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 SLC9A3R1O14745 358 aaPredicted RBP8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 ZMPSTE24O75844 475 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 PYGLP06737 847 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 LTA4HP09960 611 aaKnown RBP8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 PTPN2P17706 415 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 ATP5F1P24539 256 aaPredicted RBP8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 ITGB8P26012 769 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 PMLP29590 882 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 WEE1P30291 646 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 AVPR1AP37288 418 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 CHRNA4P43681 627 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 SCNN1BP51168 640 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 CLCN4P51793 760 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 STC1P52823 247 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 RHOAP61586 193 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 ARF5P84085 180 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 NFKB2Q00653 900 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 RNFT1Q5M7Z0 435 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 SH2D4BQ5SQS7 431 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 LYPLAL1Q5VWZ2 237 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 ZDHHC20Q5W0Z9 365 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 LRRC8EQ6NSJ5 796 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 FAM117BQ6P1L5 589 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 NCEH1Q6PIU2 408 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 CERS6Q6ZMG9 384 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 UBE2Q1Q7Z7E8 422 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 C10orf107Q8IVU9 208 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 CARNMT1Q8N4J0 409 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 ARL14EPQ8N8R7 260 aaPredicted RBP8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 TDRD5Q8NAT2 981 aaKnown RBP8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 KLHL23Q8NBE8 558 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 OR6P1Q8NGX9 317 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 OR4L1Q8NH43 312 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 BLOC1S5Q8TDH9 187 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 RMDN1Q96DB5 314 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 ELMO2Q96JJ3 720 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 TCF25Q9BQ70 676 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 MECRQ9BV79 373 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 SLC2A11Q9BYW1 496 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 CEP44Q9C0F1 390 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 MCOLN1Q9GZU1 580 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 DRC3Q9H069 523 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 ILKAPQ9H0C8 392 aaPredicted RBP8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 MYLK2Q9H1R3 596 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 CCDC68Q9H2F9 335 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 ATXN3LQ9H3M9 355 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 KCNK13Q9HB14 408 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 NOD2Q9HC29 1040 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 EML4Q9HC35 981 aaKnown RBP8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 GKN1Q9NS71 199 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 SLC17A6Q9P2U8 582 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 TRIM33Q9UPN9 1127 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 VWA7Q9Y334 891 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 RAP2CQ9Y3L5 183 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 OR51B4Q9Y5P0 310 aa8.6□□□□□ -1.03
PPARGC1A-211ENST00000513205 HTTP42858 3142 aa8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 C2orf71A6NGG8 1288 aa8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 G3V2L1 256 aa8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 MUSKO15146 869 aa8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 CD3EAPO15446 510 aaKnown RBP8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 HSPA4LO95757 839 aa8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 IGSF6O95976 241 aa8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 ACRP10323 421 aa8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 IRF1P10914 325 aa8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 NQO1P15559 274 aaKnown RBP8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 GABRB3P28472 473 aa8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 PTPN4P29074 926 aa8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 CA8P35219 290 aa8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 HMGCLP35914 325 aa8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 ZNF140P52738 457 aaPredicted RBP8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 MPP1Q00013 466 aa8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 RAD51Q06609 339 aa8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 CTBP1Q13363 440 aa8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 RCN2Q14257 317 aa8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 CYTH1Q15438 398 aa8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 ZRSR2Q15696 482 aaKnown RBP8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 CRY1Q16526 586 aa8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 FSCBQ5H9T9 825 aa8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 CFAP157Q5JU67 520 aa8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 ARMC12Q5T9G4 340 aa8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 TXNDC8Q6A555 127 aa8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 UGT3A1Q6NUS8 523 aa8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 Q6ZVU0 165 aa8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 GAREM2Q75VX8 874 aa8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 DENND6AQ8IWF6 608 aa8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 PARP9Q8IXQ6 854 aa8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 CENPLQ8N0S6 344 aaPredicted RBP8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 FSTL5Q8N475 847 aaPredicted RBP8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 CHCHD4Q8N4Q1 142 aa8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 GPATCH11Q8N954 259 aa8.59□□□□□ -1.03
PPARGC1A-211ENST00000513205 RHEBL1Q8TAI7 183 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms