RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 PLEKHB1Q9UF11 243 aaPredicted RBP4.41□□□□□ -1.7
HTT-210ENST00000512909 LIMA1Q9UHB6 759 aaKnown RBP4.41□□□□□ -1.7
HTT-210ENST00000512909 CARD8Q9Y2G2 431 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.41□□□□□ -1.7
HTT-210ENST00000512909 PAM16Q9Y3D7 125 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 CLDN16Q9Y5I7 305 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 PAPPAQ13219 1627 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 CICQ96RK0 1608 aaPredicted RBP4.41□□□□□ -1.7
HTT-210ENST00000512909 ZNF804BA4D1E1 1349 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 ATP10DQ9P241 1426 aa4.4□□□□□ -1.7
HTT-210ENST00000512909 A0A087X0M5 115 aa4.4□□□□□ -1.71
HTT-210ENST00000512909 TRBV5-3A0A0A0MS03 114 aa4.4□□□□□ -1.71
HTT-210ENST00000512909 A0A1B0GX30 115 aa4.4□□□□□ -1.71
HTT-210ENST00000512909 GAGE12JA6NER3 117 aa4.4□□□□□ -1.71
HTT-210ENST00000512909 GLTPD2A6NH11 291 aa4.4□□□□□ -1.71
HTT-210ENST00000512909 AP3D1O14617 1153 aa4.4□□□□□ -1.71
HTT-210ENST00000512909 RNASEH2AO75792 299 aaKnown RBP4.4□□□□□ -1.71
HTT-210ENST00000512909 SEC14L2O76054 403 aa4.4□□□□□ -1.71
HTT-210ENST00000512909 DDNO94850 711 aaPredicted RBP4.4□□□□□ -1.71
HTT-210ENST00000512909 TMEM63AO94886 807 aa4.4□□□□□ -1.71
HTT-210ENST00000512909 CBSLP0DN79 551 aa4.4□□□□□ -1.71
HTT-210ENST00000512909 UNGP13051 313 aaPredicted RBP4.4□□□□□ -1.71
HTT-210ENST00000512909 SCP2P22307 547 aa4.4□□□□□ -1.71
HTT-210ENST00000512909 PSMA4P25789 261 aaKnown RBP4.4□□□□□ -1.71
HTT-210ENST00000512909 CBSP35520 551 aa4.4□□□□□ -1.71
HTT-210ENST00000512909 PPARGP37231 505 aaPredicted RBP4.4□□□□□ -1.71
HTT-210ENST00000512909 POLD2P49005 469 aa4.4□□□□□ -1.71
HTT-210ENST00000512909 RPL7AP62424 266 aaKnown RBP4.4□□□□□ -1.71
HTT-210ENST00000512909 CYP4A11Q02928 519 aa4.4□□□□□ -1.71
HTT-210ENST00000512909 MTX1Q13505 466 aa4.4□□□□□ -1.71
HTT-210ENST00000512909 ARHGEF6Q15052 776 aa4.4□□□□□ -1.71
HTT-210ENST00000512909 PRTGQ2VWP7 1150 aa4.4□□□□□ -1.71
HTT-210ENST00000512909 DPCR1Q3MIW9 517 aa4.4□□□□□ -1.71
HTT-210ENST00000512909 SYTL3Q4VX76 610 aa4.4□□□□□ -1.71
HTT-210ENST00000512909 SLC9B1Q4ZJI4 515 aa4.4□□□□□ -1.71
HTT-210ENST00000512909 DCAF6Q58WW2 860 aa4.4□□□□□ -1.71
HTT-210ENST00000512909 ZNF667Q5HYK9 610 aa4.4□□□□□ -1.71
HTT-210ENST00000512909 PIK3CD-AS1Q5SR53 167 aa4.4□□□□□ -1.71
HTT-210ENST00000512909 HYIQ5T013 277 aa4.4□□□□□ -1.71
HTT-210ENST00000512909 EXD3Q8N9H8 876 aa4.4□□□□□ -1.71
HTT-210ENST00000512909 C16orf52Q8NHV5 167 aa4.4□□□□□ -1.71
HTT-210ENST00000512909 CEP76Q8TAP6 659 aa4.4□□□□□ -1.71
HTT-210ENST00000512909 SDF4Q9BRK5 362 aa4.4□□□□□ -1.71
HTT-210ENST00000512909 FRMD8Q9BZ67 464 aaPredicted RBP4.4□□□□□ -1.71
HTT-210ENST00000512909 CATSPERBQ9H7T0 1116 aa4.4□□□□□ -1.71
HTT-210ENST00000512909 SEMA4BQ9NPR2 832 aaPredicted RBP4.4□□□□□ -1.71
HTT-210ENST00000512909 SPATS2LQ9NUQ6 558 aaKnown RBP4.4□□□□□ -1.71
HTT-210ENST00000512909 EHD2Q9NZN4 543 aa4.4□□□□□ -1.71
HTT-210ENST00000512909 SRPRBQ9Y5M8 271 aaKnown RBP4.4□□□□□ -1.71
HTT-210ENST00000512909 PXDNLA1KZ92 1463 aa4.4□□□□□ -1.71
HTT-210ENST00000512909 KCPQ6ZWJ8 1503 aa4.4□□□□□ -1.71
HTT-210ENST00000512909 ARHGEF17Q96PE2 2063 aaPredicted RBP4.39□□□□□ -1.71
HTT-210ENST00000512909 ANKRD18BA2A2Z9 1011 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 PI4KAP2A4QPH2 592 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 HSPB6O14558 160 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 BBOX1O75936 387 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 TOMM70O94826 608 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 KLKB1P03952 638 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 CYP1A2P05177 515 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 CDK4P11802 303 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 HOXD9P28356 352 aaPredicted RBP4.39□□□□□ -1.71
HTT-210ENST00000512909 TNFSF8P32971 234 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 CPOXP36551 454 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 CLCN5P51795 746 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 PTGR1Q14914 329 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 TBCEQ15813 527 aaPredicted RBP4.39□□□□□ -1.71
HTT-210ENST00000512909 RPE65Q16518 533 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 UBAP2Q5T6F2 1119 aaKnown RBP4.39□□□□□ -1.71
HTT-210ENST00000512909 OTUD1Q5VV17 481 aaPredicted RBP4.39□□□□□ -1.71
HTT-210ENST00000512909 CDC73Q6P1J9 531 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 TMTC3Q6ZXV5 915 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 H1FNTQ75WM6 255 aaPredicted RBP4.39□□□□□ -1.71
HTT-210ENST00000512909 WDR63Q8IWG1 891 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 PI4KAP1Q8N8J0 262 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 CADM4Q8NFZ8 388 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 KCNG4Q8TDN1 519 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 ADAMTS15Q8TE58 950 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 FAM149B1Q96BN6 582 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 ZNF570Q96NI8 536 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 CDT1Q9H211 546 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 FOXP1Q9H334 677 aaPredicted RBP4.39□□□□□ -1.71
HTT-210ENST00000512909 PLEKHA5Q9HAU0 1116 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 PCDHB16Q9NRJ7 776 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 C20orf141Q9NUB4 165 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 NCKIPSDQ9NZQ3 722 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 MSRB1Q9NZV6 116 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 HDAC6Q9UBN7 1215 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 A4GNTQ9UNA3 340 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 NAALADL1Q9UQQ1 740 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 AAR2Q9Y312 384 aaKnown RBP4.39□□□□□ -1.71
HTT-210ENST00000512909 UBN2Q6ZU65 1347 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 SH3TC1Q8TE82 1336 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 EP400Q96L91 3159 aa4.39□□□□□ -1.71
HTT-210ENST00000512909 C10orf71Q711Q0 1435 aa4.38□□□□□ -1.71
HTT-210ENST00000512909 MRC1P22897 1456 aa4.38□□□□□ -1.71
HTT-210ENST00000512909 A0A0A0MQY5 61 aa4.38□□□□□ -1.71
HTT-210ENST00000512909 TRBV5-7A0A0A0MS05 114 aa4.38□□□□□ -1.71
HTT-210ENST00000512909 WDR91A4D1P6 747 aa4.38□□□□□ -1.71
HTT-210ENST00000512909 USP17L23D6RBM5 183 aa4.38□□□□□ -1.71
HTT-210ENST00000512909 H3BNX3 289 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms