RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 NRIP1P48552 1158 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 RCAN2Q14206 197 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 TAF5Q15542 800 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 SPIN3Q5JUX0 258 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 KDELC1Q6UW63 502 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 CYP2R1Q6VVX0 501 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 HEATR4Q86WZ0 1026 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 C3orf20Q8ND61 904 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 OR7D4Q8NG98 312 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 PIK3R3Q92569 461 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 FAM84BQ96KN1 310 aaPredicted RBP8.94□□□□□ -0.98
VCAN-208ENST00000512590 APOL4Q9BPW4 351 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 REEP2Q9BRK0 252 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 WRAP53Q9BUR4 548 aaKnown RBP8.94□□□□□ -0.98
VCAN-208ENST00000512590 GRIP2Q9C0E4 1043 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 DNAJC5Q9H3Z4 198 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 CYP3A43Q9HB55 503 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 TIMMDC1Q9NPL8 285 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 MAP3K6O95382 1288 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 CHRNGP07510 517 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 CXCL8P10145 99 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 SAGP10523 405 aaPredicted RBP8.94□□□□□ -0.98
VCAN-208ENST00000512590 NR2C1P13056 603 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 PGAM2P15259 253 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 ZNF41P51814 821 aaPredicted RBP8.94□□□□□ -0.98
VCAN-208ENST00000512590 CRISP1P54107 249 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 UBE2NP61088 152 aaKnown RBP8.94□□□□□ -0.98
VCAN-208ENST00000512590 MANEAQ5SRI9 462 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 DEF8Q6ZN54 512 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 RASGRP2Q7LDG7 609 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 ZNF572Q7Z3I7 529 aaPredicted RBP8.94□□□□□ -0.98
VCAN-208ENST00000512590 ZZZ3Q8IYH5 903 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 RASGEF1CQ8N431 466 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 LINC00116Q8NCU8 138 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 FBRSL1Q9HCM7 1045 aaKnown RBP8.94□□□□□ -0.98
VCAN-208ENST00000512590 TIGARQ9NQ88 270 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 TMEM216Q9P0N5 145 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 R3HDM2Q9Y2K5 976 aaKnown RBP8.94□□□□□ -0.98
VCAN-208ENST00000512590 NEDD4P46934 1319 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 FAM86C2PA6NEL3 165 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.94□□□□□ -0.98
VCAN-208ENST00000512590 ARPC2O15144 300 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 NCK2O43639 380 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 PSMB9P28065 219 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 PPIDQ08752 370 aaKnown RBP8.94□□□□□ -0.98
VCAN-208ENST00000512590 DNAJC14Q6Y2X3 702 aaPredicted RBP8.94□□□□□ -0.98
VCAN-208ENST00000512590 CEP97Q8IW35 865 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 NAXEQ8NCW5 288 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 OR5M3Q8NGP4 307 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 SENP8Q96LD8 212 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 KLHL15Q96M94 604 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 FAM118BQ9BPY3 351 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 NPLQ9BXD5 320 aaPredicted RBP8.94□□□□□ -0.98
VCAN-208ENST00000512590 PDE7BQ9NP56 450 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 ACOT9Q9Y305 439 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 CCDC163A0A0D9SF12 145 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 CCL5P13501 91 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 ZNF37AP17032 561 aaPredicted RBP8.94□□□□□ -0.98
VCAN-208ENST00000512590 DDX6P26196 483 aaKnown RBP eCLIP8.94□□□□□ -0.98
VCAN-208ENST00000512590 TMBIM6P55061 237 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 MANFP55145 182 aaKnown RBP8.94□□□□□ -0.98
VCAN-208ENST00000512590 ZNF445P59923 1031 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 RBM39Q14498 530 aaKnown RBP8.94□□□□□ -0.98
VCAN-208ENST00000512590 CRY2Q49AN0 593 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 DCLRE1AQ6PJP8 1040 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 LPCAT2Q7L5N7 544 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 SYVN1Q86TM6 617 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 DDHD1Q8NEL9 900 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 GOT1L1Q8NHS2 421 aaPredicted RBP8.94□□□□□ -0.98
VCAN-208ENST00000512590 NDNFQ8TB73 568 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 GRAMD1AQ96CP6 724 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 THOC3Q96J01 351 aaKnown RBP8.94□□□□□ -0.98
VCAN-208ENST00000512590 HEPHQ9BQS7 1158 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 PLGRKTQ9HBL7 147 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 MID1IP1Q9NPA3 183 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 FAM205AQ6ZU69 1335 aa8.94□□□□□ -0.98
VCAN-208ENST00000512590 PSMD11O00231 422 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 CYB5BO43169 146 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 TULP3O75386 442 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 PPM1BO75688 479 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 TM7SF2O76062 418 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 HOXB9P17482 250 aaPredicted RBP8.93□□□□□ -0.98
VCAN-208ENST00000512590 FMO5P49326 533 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 NRLP54845 237 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 MAGOHP61326 146 aaKnown RBP8.93□□□□□ -0.98
VCAN-208ENST00000512590 TMC3Q7Z5M5 1100 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 COLGALT1Q8NBJ5 622 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 SLC25A36Q96CQ1 311 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 PHF21BQ96EK2 531 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 DGAT2Q96PD7 388 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 WDR77Q9BQA1 342 aaPredicted RBP8.93□□□□□ -0.98
VCAN-208ENST00000512590 GSDMCQ9BYG8 508 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 ATG10Q9H0Y0 220 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 PTGES2Q9H7Z7 377 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 TRPS1Q9UHF7 1281 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 DDX20Q9UHI6 824 aaKnown RBP8.93□□□□□ -0.98
VCAN-208ENST00000512590 OR6C75A6NL08 312 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 A6NL46 340 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 MAN2B1O00754 1011 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 GPR37L1O60883 481 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms