RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 SLC35G1Q2M3R5 365 aa2.85□□□□□ -1.95
CLOCK-209ENST00000511124 TMEM52BQ4KMG9 183 aa2.85□□□□□ -1.95
CLOCK-209ENST00000511124 PPP1R26Q5T8A7 1209 aaPredicted RBP2.85□□□□□ -1.95
CLOCK-209ENST00000511124 CES4AQ5XG92 561 aa2.85□□□□□ -1.95
CLOCK-209ENST00000511124 TCEAL6Q6IPX3 200 aa2.85□□□□□ -1.95
CLOCK-209ENST00000511124 TMEM71Q6P5X7 295 aa2.85□□□□□ -1.95
CLOCK-209ENST00000511124 SYVN1Q86TM6 617 aa2.85□□□□□ -1.95
CLOCK-209ENST00000511124 NLRP8Q86W28 1048 aa2.85□□□□□ -1.95
CLOCK-209ENST00000511124 TRAPPC5Q8IUR0 188 aa2.85□□□□□ -1.95
CLOCK-209ENST00000511124 DCBLD1Q8N8Z6 715 aa2.85□□□□□ -1.95
CLOCK-209ENST00000511124 CALML6Q8TD86 181 aa2.85□□□□□ -1.95
CLOCK-209ENST00000511124 SSC4DQ8WTU2 575 aa2.85□□□□□ -1.95
CLOCK-209ENST00000511124 ZNF606Q8WXB4 792 aa2.85□□□□□ -1.95
CLOCK-209ENST00000511124 TCEAL3Q969E4 200 aa2.85□□□□□ -1.95
CLOCK-209ENST00000511124 NACC2Q96BF6 587 aa2.85□□□□□ -1.95
CLOCK-209ENST00000511124 MRRFQ96E11 262 aaKnown RBP2.85□□□□□ -1.95
CLOCK-209ENST00000511124 HIC2Q96JB3 615 aa2.85□□□□□ -1.95
CLOCK-209ENST00000511124 CCDC42Q96M95 316 aa2.85□□□□□ -1.95
CLOCK-209ENST00000511124 CNPPD1Q9BV87 410 aa2.85□□□□□ -1.95
CLOCK-209ENST00000511124 LRRC3Q9BY71 257 aa2.85□□□□□ -1.95
CLOCK-209ENST00000511124 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP2.85□□□□□ -1.95
CLOCK-209ENST00000511124 GJB4Q9NTQ9 266 aa2.85□□□□□ -1.95
CLOCK-209ENST00000511124 UVRAGQ9P2Y5 699 aa2.85□□□□□ -1.95
CLOCK-209ENST00000511124 CLIC4Q9Y696 253 aa2.85□□□□□ -1.95
CLOCK-209ENST00000511124 ALPK3Q96L96 1907 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 SIPA1L1O43166 1804 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 GOLGA4Q13439 2230 aaKnown RBP2.84□□□□□ -1.95
CLOCK-209ENST00000511124 TRAV17A0A0B4J275 112 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 LILRA5A6NI73 299 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 POM121CA8CG34 1229 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 H7C0C1 242 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 K7ESM1 405 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 KDELR3O43731 214 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 GDF9O60383 454 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 BRINP1O60477 761 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 CDH16O75309 829 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 SLC25A14O95258 325 aaPredicted RBP2.84□□□□□ -1.95
CLOCK-209ENST00000511124 PAK4O96013 591 aaPredicted RBP2.84□□□□□ -1.95
CLOCK-209ENST00000511124 LINC00271P0C7V0 271 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 CD46P15529 392 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 ZNF16P17020 682 aaPredicted RBP2.84□□□□□ -1.95
CLOCK-209ENST00000511124 ITGA3P26006 1051 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 SHMT2P34897 504 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 GNPDA1P46926 289 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 ATP5OP48047 213 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 HK3P52790 923 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 NSUN2Q08J23 767 aaKnown RBP eCLIP2.84□□□□□ -1.95
CLOCK-209ENST00000511124 PDCLQ13371 301 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 INAQ16352 499 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 TCHHL1Q5QJ38 904 aaPredicted RBP2.84□□□□□ -1.95
CLOCK-209ENST00000511124 THEMIS2Q5TEJ8 643 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 ZNF662Q6ZS27 426 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 ARHGEF18Q6ZSZ5 1173 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 Q6ZVU0 165 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 RFX6Q8HWS3 928 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 ARFGAP1Q8N6T3 406 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 RTL3Q8N8U3 475 aaKnown RBP2.84□□□□□ -1.95
CLOCK-209ENST00000511124 C3orf58Q8NDZ4 430 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 OR4D9Q8NGE8 314 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 PROKR1Q8TCW9 393 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 PLEKHO2Q8TD55 490 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 ADAMTS18Q8TE60 1221 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 ZNF592Q92610 1267 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 VPS39Q96JC1 886 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 DNAJC1Q96KC8 554 aaKnown RBP2.84□□□□□ -1.95
CLOCK-209ENST00000511124 ART5Q96L15 291 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 FEM1AQ9BSK4 669 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 FRMD8P1Q9BZ68 369 aaPredicted RBP2.84□□□□□ -1.95
CLOCK-209ENST00000511124 NGBQ9NPG2 151 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 MRPL40Q9NQ50 206 aaKnown RBP2.84□□□□□ -1.95
CLOCK-209ENST00000511124 ARHGEF38Q9NXL2 777 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 B4GALT7Q9UBV7 327 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 PCDHA7Q9UN72 937 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 SNX8Q9Y5X2 465 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 COPG1Q9Y678 874 aaKnown RBP2.84□□□□□ -1.95
CLOCK-209ENST00000511124 USP3Q9Y6I4 520 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 MIA3Q5JRA6 1907 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 SCN5AQ14524 2016 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 RALGAPA1Q6GYQ0 2036 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 FAM208BQ5VWN6 2430 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 ZNF318Q5VUA4 2279 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 BSNQ9UPA5 3926 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 SPTY2D1-AS1A0A0U1RR47 76 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 GOLGA6L3A6NEY3 463 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 C2orf74A8MZ97 194 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 FCHO1O14526 889 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 GOSR1O95249 250 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 IFNA2P01563 188 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 SLC4A1P02730 911 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 CATP04040 527 aaKnown RBP2.84□□□□□ -1.95
CLOCK-209ENST00000511124 HOXD4P09016 255 aaPredicted RBP2.84□□□□□ -1.95
CLOCK-209ENST00000511124 BMP4P12644 408 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 COX7A2P14406 83 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 PKMP14618 531 aaKnown RBP2.84□□□□□ -1.95
CLOCK-209ENST00000511124 CD1EP15812 388 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 ABOP16442 354 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 HLA-DPA1P20036 260 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 LMO2P25791 158 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 SLC5A2P31639 672 aa2.84□□□□□ -1.95
CLOCK-209ENST00000511124 ADRA1BP35368 520 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms