RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 LRIG1Q96JA1 1093 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 SERAC1Q96JX3 654 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 CCDC114Q96M63 670 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 COQ10AQ96MF6 247 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 TUBGCP5Q96RT8 1024 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 GTPBP2Q9BX10 602 aaKnown RBP7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 TLR10Q9BXR5 811 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 OSBPL1AQ9BXW6 950 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 OSBPL8Q9BZF1 889 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 TMEM9BQ9NQ34 198 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 RAB6BQ9NRW1 208 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 RBM22Q9NW64 420 aaKnown RBP eCLIP7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 DDX56Q9NY93 547 aaKnown RBP7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 SMARCAL1Q9NZC9 954 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 HPCAL4Q9UM19 191 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 WASF3Q9UPY6 502 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 NCKAP1Q9Y2A7 1128 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 ANKRD6Q9Y2G4 727 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 PPP2R2CQ9Y2T4 447 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 SPO11Q9Y5K1 396 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 RAI2Q9Y5P3 530 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 COL5A1P20908 1838 aaPredicted RBP7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 CABIN1Q9Y6J0 2220 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 TBC1D3DA0A087WVF3 549 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 TBC1D3IA0A087WXS9 549 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 TBC1D3EA0A087X179 549 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 TBC1D3KA0A087X1G2 549 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 LY6G6EA0A0G2JKS1 128 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 TBC1D3FA6NER0 549 aaPredicted RBP7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 A8MX80 341 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 TBC1D3LB9A6J9 549 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 SOCS5O75159 536 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 HEXIM1O94992 359 aaKnown RBP7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 MT-CYBP00156 380 aaPredicted RBP7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 CELA2BP08218 269 aaPredicted RBP7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 TBC1D3HP0C7X1 549 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 CCNB1P14635 433 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 TGM2P21980 687 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 HNRNPA2B1P22626 353 aaKnown RBP7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 RBL1P28749 1068 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 EPHA8P29322 1005 aaPredicted RBP7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 CD86P42081 329 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 CHRNA4P43681 627 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 LIG3P49916 1009 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 AFF3P51826 1226 aaKnown RBP7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 RACK1P63244 317 aaKnown RBP7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 NSUN2Q08J23 767 aaKnown RBP eCLIP7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 EIF2B5Q13144 721 aaKnown RBP7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 FZD2Q14332 565 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 GALNT3Q14435 633 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 HLA-BQ31612 363 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 SLC45A4Q5BKX6 768 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 TFDP3Q5H9I0 405 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 MEI1Q5TIA1 1274 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 MARC1Q5VT66 337 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 TBC1D3GQ6DHY5 549 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 TBC1D3CQ6IPX1 549 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 KIAA1161Q6NSJ0 714 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 LIPIQ6XZB0 460 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 PRUNE1Q86TP1 453 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 GATAD2AQ86YP4 633 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 SFTPA2Q8IWL1 248 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 KLHDC8BQ8IXV7 354 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 TBC1D3Q8IZP1 549 aaPredicted RBP7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 RBFAQ8N0V3 343 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 ZNF567Q8N184 647 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 C17orf53Q8N3J3 647 aaPredicted RBP7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 GLIS1Q8NBF1 620 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 DEFB124Q8NES8 71 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 SLC35B2Q8TB61 432 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 ACTL9Q8TC94 416 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 IMP4Q96G21 291 aaKnown RBP7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 PDXPQ96GD0 296 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 PPP1R16AQ96I34 528 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 RBM41Q96IZ5 413 aaKnown RBP7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 ZNF641Q96N77 438 aaPredicted RBP7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 RBM15Q96T37 977 aaKnown RBP eCLIP7.23□□□□□ -1.258e-8■■□□□ 13.7
TOPBP1-207ENST00000509162 AGAP2Q99490 1192 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 GAREM1Q9H706 876 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 ATP13A3Q9H7F0 1226 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 USP29Q9HBJ7 922 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 LZTFL1Q9NQ48 299 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 UCKL1Q9NWZ5 548 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 PPIL1Q9Y3C6 166 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 U3KQA8 63 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 CHD8Q9HCK8 2581 aa7.23□□□□□ -1.25
TOPBP1-207ENST00000509162 LAMA5O15230 3695 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 CFAP47Q6ZTR5 3102 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 A0A0J9YYE9 177 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 A0A1B0GTQ1 180 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 SPAARA0A1B0GVQ0 90 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 SERTM1A2A2V5 107 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 CCDC66A2RUB6 948 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 CAPN8A6NHC0 703 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 APOC4-APOC2K7ER74 178 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 AURKAO14965 403 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 GPR39O43194 453 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 TSPAN6O43657 245 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 SH3BP5O60239 455 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 SDC3O75056 442 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms