RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 NEDD9Q14511 834 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 EFTUD2Q15029 972 aaKnown RBP eCLIP3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 CLPPQ16740 277 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 KLHL26Q53HC5 615 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 CFAP157Q5JU67 520 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 RRAGBQ5VZM2 374 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 MRNIPQ6NTE8 343 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 RINT1Q6NUQ1 792 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 MTHFD1LQ6UB35 978 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 KIF6Q6ZMV9 814 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 TOM1L2Q6ZVM7 507 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 KRT28Q7Z3Y7 464 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 GLRX5Q86SX6 157 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 C4orf19Q8IY42 314 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 CFAP206Q8IYR0 622 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 CLYBLQ8N0X4 340 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 SCML4Q8N228 414 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 TRIML2Q8N7C3 387 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 FSIP1Q8NA03 581 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 NEK11Q8NG66 645 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 OR13C2Q8NGS9 318 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 CSGALNACT1Q8TDX6 532 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 SLC22A17Q8WUG5 538 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 SNX19Q92543 992 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 NCLNQ969V3 563 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 EFHD2Q96C19 240 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 GRAMD1AQ96CP6 724 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 PGAM5Q96HS1 289 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 HES6Q96HZ4 224 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 IFT74Q96LB3 600 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 FER1L6-AS2Q96M78 137 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 KLHL32Q96NJ5 620 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 CAMK1GQ96NX5 476 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 LENG8Q96PV6 779 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 NUDCD1Q96RS6 583 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 PKP4Q99569 1192 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 EIF3CQ99613 913 aaKnown RBP3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 NAA11Q9BSU3 229 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 TUBB6Q9BUF5 446 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 CCDC106Q9BWC9 280 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 PKIBQ9C010 78 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 TRIM2Q9C040 744 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 MTMR12Q9C0I1 747 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 THAP2Q9H0W7 228 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 ISCUQ9H1K1 167 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 SLC25A18Q9H1K4 315 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 OSGEPL1Q9H4B0 414 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 NRIP3Q9NQ35 241 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 RPRD1BQ9NQG5 326 aaKnown RBP3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 GLRX2Q9NS18 164 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 CENPMQ9NSP4 180 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 GJB4Q9NTQ9 266 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 AGPAT5Q9NUQ2 364 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 FLRT1Q9NZU1 646 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 KCND2Q9NZV8 630 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 HDAC6Q9UBN7 1215 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 DNAJB9Q9UBS3 223 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 STK39Q9UEW8 545 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 FAM153AQ9UHL3 310 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 OSGIN1Q9UJX0 560 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 APPL1Q9UKG1 709 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 INTS6Q9UL03 887 aaKnown RBP3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 HSF4Q9ULV5 492 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 PCDHA6Q9UN73 950 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 SSX2IPQ9Y2D8 614 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 DNAJC16Q9Y2G8 782 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 RPH3AQ9Y2J0 694 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 GDAQ9Y2T3 454 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 NEU2Q9Y3R4 380 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 PCDHA3Q9Y5H8 950 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 ATP6V1DQ9Y5K8 247 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 SNX9Q9Y5X1 595 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 GMEB1Q9Y692 573 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 CLCA3PQ9Y6N3 262 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 SPACA6W5XKT8 324 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 MAP3K19Q56UN5 1328 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 NPHP3Q7Z494 1330 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 WDR19Q8NEZ3 1342 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 BRD4O60885 1362 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 C15orf38-AP3S2A0A0A6YYH1 394 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 CCDC195A0A1B0GUA6 201 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 GAGE10A6NGK3 116 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 NCF1BA6NI72 391 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 LRRC72A6NJI9 287 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 LINC01548A6NM66 108 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 NCF1CA8MVU1 366 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 VWC2LB2RUY7 222 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 KCNJ18B7U540 433 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 E9PI62 339 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 STMND1H3BQB6 276 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 PYCARD-AS1I3L0S3 204 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 PEX12O00623 359 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 NVLO15381 856 aaKnown RBP3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 CLDN3O15551 220 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 CIDEAO60543 219 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 HSF2BPO75031 334 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 ZNF254O75437 659 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 ERLIN1O75477 346 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms