RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 GALNT2Q10471 571 aa14.44□□□□□ -0.1
HMGCS1-203ENST00000507004 ILF3Q12906 894 aaKnown RBP eCLIP14.44□□□□□ -0.1
HMGCS1-203ENST00000507004 PAFAH1B3Q15102 231 aaKnown RBP14.44□□□□□ -0.1
HMGCS1-203ENST00000507004 CNGA3Q16281 694 aa14.44□□□□□ -0.1
HMGCS1-203ENST00000507004 IFI16Q16666 785 aaKnown RBP14.44□□□□□ -0.1
HMGCS1-203ENST00000507004 C3orf38Q5JPI3 329 aa14.44□□□□□ -0.1
HMGCS1-203ENST00000507004 FAM46DQ8NEK8 389 aa14.44□□□□□ -0.1
HMGCS1-203ENST00000507004 DTD2Q96FN9 168 aa14.44□□□□□ -0.1
HMGCS1-203ENST00000507004 PDXPQ96GD0 296 aa14.44□□□□□ -0.1
HMGCS1-203ENST00000507004 ZNF830Q96NB3 372 aaPredicted RBP14.44□□□□□ -0.1
HMGCS1-203ENST00000507004 FCRL3Q96P31 734 aaPredicted RBP14.44□□□□□ -0.1
HMGCS1-203ENST00000507004 TSGA13Q96PP4 275 aa14.44□□□□□ -0.1
HMGCS1-203ENST00000507004 TEX101Q9BY14 249 aa14.44□□□□□ -0.1
HMGCS1-203ENST00000507004 NOD2Q9HC29 1040 aa14.44□□□□□ -0.1
HMGCS1-203ENST00000507004 ASCL3Q9NQ33 180 aa14.44□□□□□ -0.1
HMGCS1-203ENST00000507004 ETNK2Q9NVF9 386 aa14.44□□□□□ -0.1
HMGCS1-203ENST00000507004 CTTNBP2NLQ9P2B4 639 aa14.44□□□□□ -0.1
HMGCS1-203ENST00000507004 RPL26L1Q9UNX3 145 aaKnown RBP14.44□□□□□ -0.1
HMGCS1-203ENST00000507004 SATB2Q9UPW6 733 aa14.44□□□□□ -0.1
HMGCS1-203ENST00000507004 PCDHGC4Q9Y5F7 938 aa14.44□□□□□ -0.1
HMGCS1-203ENST00000507004 PTPRQQ9UMZ3 2332 aa14.44□□□□□ -0.1
HMGCS1-203ENST00000507004 LRRK1Q38SD2 2015 aa14.44□□□□□ -0.1
HMGCS1-203ENST00000507004 SSU72P8A0A1W2PR75 194 aa14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 PRSS38A1L453 326 aa14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 TMEM202A6NGA9 273 aa14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 MATN3O15232 486 aa14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 NUDT21O43809 227 aaKnown RBP14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 PROSCO94903 275 aa14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 GYPCP04921 128 aa14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 ITGA2BP08514 1039 aa14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 CCNCP24863 283 aa14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 CCKBRP32239 447 aa14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 GARSP41250 739 aaKnown RBP14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 CCDC173Q0VFZ6 552 aa14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 SLC18A3Q16572 532 aa14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 C14orf28Q4W4Y0 310 aa14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 ALG1LQ6GMV1 187 aa14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 ZNF765Q7L2R6 523 aa14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 CLEC14AQ86T13 490 aa14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 VSIG1Q86XK7 387 aa14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 CBARPQ8N350 705 aaPredicted RBP14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 KYQ8NBH2 561 aa14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 KCTD6Q8NC69 237 aa14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 PLA2G15Q8NCC3 412 aa14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 OR8K1Q8NGG5 319 aa14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 OR1E3Q8WZA6 343 aa14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 MAML1Q92585 1016 aa14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 CCDC74AQ96AQ1 378 aa14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 WBP1Q96G27 269 aa14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 ATXN7L3BQ96GX2 97 aa14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 LRRN3Q9H3W5 708 aa14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 DEF6Q9H4E7 631 aa14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 SYNDIG1Q9H7V2 258 aa14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 FGF22Q9HCT0 170 aa14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 IFNKQ9P0W0 207 aa14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 SIRPGQ9P1W8 387 aa14.43□□□□□ -0.1
HMGCS1-203ENST00000507004 ZNF487B1APH4 448 aa14.42□□□□□ -0.1
HMGCS1-203ENST00000507004 D6RAR5 112 aa14.42□□□□□ -0.1
HMGCS1-203ENST00000507004 ATXN7O15265 892 aaPredicted RBP14.42□□□□□ -0.1
HMGCS1-203ENST00000507004 TCF4P15884 667 aa14.42□□□□□ -0.1
HMGCS1-203ENST00000507004 IL4RP24394 825 aa14.42□□□□□ -0.1
HMGCS1-203ENST00000507004 CASP14P31944 242 aa14.42□□□□□ -0.1
HMGCS1-203ENST00000507004 ARSEP51690 589 aa14.42□□□□□ -0.1
HMGCS1-203ENST00000507004 EPHB1P54762 984 aa14.42□□□□□ -0.1
HMGCS1-203ENST00000507004 INHBCP55103 352 aa14.42□□□□□ -0.1
HMGCS1-203ENST00000507004 RHDQ02161 417 aa14.42□□□□□ -0.1
HMGCS1-203ENST00000507004 ITKQ08881 620 aa14.42□□□□□ -0.1
HMGCS1-203ENST00000507004 TRAF2Q12933 501 aa14.42□□□□□ -0.1
HMGCS1-203ENST00000507004 DPYSL3Q14195 570 aa14.42□□□□□ -0.1
HMGCS1-203ENST00000507004 CERCAMQ5T4B2 595 aa14.42□□□□□ -0.1
HMGCS1-203ENST00000507004 HEATR4Q86WZ0 1026 aa14.42□□□□□ -0.1
HMGCS1-203ENST00000507004 TP53INP2Q8IXH6 220 aa14.42□□□□□ -0.1
HMGCS1-203ENST00000507004 PGBD5Q8N414 524 aa14.42□□□□□ -0.1
HMGCS1-203ENST00000507004 SEMA3CQ99985 751 aa14.42□□□□□ -0.1
HMGCS1-203ENST00000507004 DPEP2Q9H4A9 486 aa14.42□□□□□ -0.1
HMGCS1-203ENST00000507004 CAAP1Q9H8G2 361 aa14.42□□□□□ -0.1
HMGCS1-203ENST00000507004 CYP4F12Q9HCS2 524 aa14.42□□□□□ -0.1
HMGCS1-203ENST00000507004 NT5MQ9NPB1 228 aa14.42□□□□□ -0.1
HMGCS1-203ENST00000507004 AKAP7Q9P0M2 348 aaPredicted RBP14.42□□□□□ -0.1
HMGCS1-203ENST00000507004 MOSPD1Q9UJG1 213 aa14.42□□□□□ -0.1
HMGCS1-203ENST00000507004 PCDHGA7Q9Y5G6 932 aa14.42□□□□□ -0.1
HMGCS1-203ENST00000507004 RAI2Q9Y5P3 530 aa14.42□□□□□ -0.1
HMGCS1-203ENST00000507004 DSPP15924 2871 aaKnown RBP14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 CDRT15L2A8MXV6 281 aa14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 PLD2O14939 933 aa14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 FZD6O60353 706 aa14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 RPLP0P05388 317 aaKnown RBP14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 IVLP07476 585 aa14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 CELA2BP08218 269 aaPredicted RBP14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 TMEM253P0C7T8 217 aa14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 CCNB1P14635 433 aa14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 GM2AP17900 193 aa14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 MAXP61244 160 aa14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 SKOR1P84550 965 aa14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 CDK3Q00526 305 aa14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 COL9A2Q14055 689 aaPredicted RBP14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 ANKRD20A8PQ5CZ79 823 aa14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 ZFYVE27Q5T4F4 411 aa14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 NCBP2-AS2Q69YL0 99 aa14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 SPECC1LQ69YQ0 1117 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms