RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 PIH1D2Q8WWB5 315 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 MAIP1Q8WWC4 291 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 CENPTQ96BT3 561 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 LRRC45Q96CN5 670 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 RMDN1Q96DB5 314 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 IFT43Q96FT9 208 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 IMP4Q96G21 291 aaKnown RBP7.29□□□□□ -1.24
GYPB-206ENST00000506516 PDLIM2Q96JY6 352 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 BMFQ96LC9 184 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 NSMCE3Q96MG7 304 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 QKIQ96PU8 341 aaKnown RBP eCLIP7.29□□□□□ -1.24
GYPB-206ENST00000506516 SRPK1Q96SB4 655 aaKnown RBP7.29□□□□□ -1.24
GYPB-206ENST00000506516 RBM15Q96T37 977 aaKnown RBP eCLIP7.29□□□□□ -1.24
GYPB-206ENST00000506516 ELF4Q99607 663 aaPredicted RBP7.29□□□□□ -1.24
GYPB-206ENST00000506516 MYOCQ99972 504 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 MLPHQ9BV36 600 aaPredicted RBP7.29□□□□□ -1.24
GYPB-206ENST00000506516 CEP41Q9BYV8 373 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 FRMD8P1Q9BZ68 369 aaPredicted RBP7.29□□□□□ -1.24
GYPB-206ENST00000506516 CARD9Q9H257 536 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 SLC32A1Q9H598 525 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 PCDH9Q9HC56 1237 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 FZD3Q9NPG1 666 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 TM7SF3Q9NS93 570 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 GGT7Q9UJ14 662 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 DNPEPQ9ULA0 475 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 PPIL1Q9Y3C6 166 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 SLCO1B1Q9Y6L6 691 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 CHD5Q8TDI0 1954 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 LAMA1P25391 3075 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 A0A0J9YYE9 177 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 PSMD11O00231 422 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 TM4SF5O14894 197 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 RAD51BO15315 384 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 CAPN5O15484 640 aaPredicted RBP7.28□□□□□ -1.24
GYPB-206ENST00000506516 YKT6O15498 198 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 KCNN4O15554 427 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 SPINT1O43278 529 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 KIF5CO60282 957 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 PRMT3O60678 531 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 RECQL5O94762 991 aaPredicted RBP7.28□□□□□ -1.24
GYPB-206ENST00000506516 IL2RAP01589 272 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 TRBC1P01850 177 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 WNT1P04628 370 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 PRKCGP05129 697 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 PDHA1P08559 390 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 ZNF30P17039 623 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 CTPS1P17812 591 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 HTR1BP28222 390 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 STIP1P31948 543 aaKnown RBP7.28□□□□□ -1.24
GYPB-206ENST00000506516 HNF1BP35680 557 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 RXRGP48443 463 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 CCT8P50990 548 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 CLDN2P57739 230 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 BNC1Q01954 994 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 SEMG2Q02383 582 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 CDK18Q07002 472 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 CCDC173Q0VFZ6 552 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 WASHC5Q12768 1159 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 FGL2Q14314 439 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 PRPSAP1Q14558 356 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 ACOX1Q15067 660 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 SLC14A2Q15849 920 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 ZNF423Q2M1K9 1284 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 INAVAQ3KP66 663 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 ITPRIPL1Q6GPH6 555 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 AADACL2Q6P093 401 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 LAYNQ6UX15 382 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 KYAT3Q6YP21 454 aaKnown RBP7.28□□□□□ -1.24
GYPB-206ENST00000506516 DGLUCYQ7Z3D6 616 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 KDELC2Q7Z4H8 507 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 PTAR1Q7Z6K3 402 aaPredicted RBP7.28□□□□□ -1.24
GYPB-206ENST00000506516 SLC13A5Q86YT5 568 aaPredicted RBP7.28□□□□□ -1.24
GYPB-206ENST00000506516 RAVER1Q8IY67 606 aaKnown RBP7.28□□□□□ -1.24
GYPB-206ENST00000506516 ZNF567Q8N184 647 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 TP53I13Q8NBR0 393 aaPredicted RBP7.28□□□□□ -1.24
GYPB-206ENST00000506516 CCHCR1Q8TD31 782 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 SETD7Q8WTS6 366 aaKnown RBP7.28□□□□□ -1.24
GYPB-206ENST00000506516 PPP1R2P1Q96PQ5 205 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 FCRL5Q96RD9 977 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 KLF6Q99612 283 aaPredicted RBP7.28□□□□□ -1.24
GYPB-206ENST00000506516 TDRD1Q9BXT4 1180 aaKnown RBP7.28□□□□□ -1.24
GYPB-206ENST00000506516 IL21RQ9HBE5 538 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 B4GALT6Q9UBX8 382 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 FAM153AQ9UHL3 310 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 RSPH14Q9UHP6 348 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 CA5BQ9Y2D0 317 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 COQ6Q9Y2Z9 468 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 AAR2Q9Y312 384 aaKnown RBP7.28□□□□□ -1.24
GYPB-206ENST00000506516 JRKLQ9Y4A0 524 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 PCDHGB2Q9Y5G2 931 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 CFAP54Q96N23 3096 aa7.28□□□□□ -1.24
GYPB-206ENST00000506516 SPTY2D1-AS1A0A0U1RR47 76 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 A0A1B0GTQ1 180 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 GOLGA6CA6NDK9 693 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 GOLGA6BA6NDN3 693 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 POM121BA6NF01 834 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 C5orf60A6NFR6 353 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 NPIPB15A6NHN6 443 aaPredicted RBP7.27□□□□□ -1.25
GYPB-206ENST00000506516 H0Y8X5 98 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 PDE2AO00408 941 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms