RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 SATB2Q9UPW6 733 aa14.41□□□□□ -0.1
CDC42SE2-209ENST00000506419 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.41□□□□□ -0.1
CDC42SE2-209ENST00000506419 RP1P56715 2156 aa14.41□□□□□ -0.1
CDC42SE2-209ENST00000506419 LRRK1Q38SD2 2015 aa14.41□□□□□ -0.1
CDC42SE2-209ENST00000506419 A0A1W2PQM1 296 aa14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 NPIPB15A6NHN6 443 aaPredicted RBP14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 MATN3O15232 486 aa14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 PRLP01236 227 aa14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 CEACAM5P06731 702 aa14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 H2AFZP0C0S5 128 aa14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 SERPINB6P35237 376 aa14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 GARSP41250 739 aaKnown RBP14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 TLE3Q04726 772 aa14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 NIPAL4Q0D2K0 466 aa14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 COL9A2Q14055 689 aaPredicted RBP14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 SLC18A3Q16572 532 aa14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 RALGPS1Q5JS13 557 aa14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 H2AFVQ71UI9 128 aa14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 TAF8Q7Z7C8 310 aa14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 NRROSQ86YC3 692 aa14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 SPACA3Q8IXA5 215 aa14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 LSMEM2Q8N112 164 aa14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 BBS5Q8N3I7 341 aa14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 FAM46DQ8NEK8 389 aa14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 OR8K1Q8NGG5 319 aa14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 ATL2Q8NHH9 583 aa14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 NSMCE1Q8WV22 266 aa14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 RAPGEF5Q92565 580 aa14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 CCDC74AQ96AQ1 378 aa14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 FAF2Q96CS3 445 aa14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 DTD2Q96FN9 168 aa14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 NAF1Q96HR8 494 aaKnown RBP14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 SLC46A1Q96NT5 459 aa14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 TSGA13Q96PP4 275 aa14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 MCCC1Q96RQ3 725 aaPredicted RBP14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 DNAJC7Q99615 494 aa14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 TEX101Q9BY14 249 aa14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 CYP4F12Q9HCS2 524 aa14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 RBM22Q9NW64 420 aaKnown RBP eCLIP14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 UVRAGQ9P2Y5 699 aa14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 ST14Q9Y5Y6 855 aa14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 MGAQ8IWI9 3026 aa14.4□□□□□ -0.1
CDC42SE2-209ENST00000506419 NOBOXO60393 691 aa14.39□□□□□ -0.11
CDC42SE2-209ENST00000506419 TCEA3O75764 348 aa14.39□□□□□ -0.11
CDC42SE2-209ENST00000506419 GJC1P36383 396 aa14.39□□□□□ -0.11
CDC42SE2-209ENST00000506419 POLD2P49005 469 aa14.39□□□□□ -0.11
CDC42SE2-209ENST00000506419 ERVPABLB-1P60509 514 aa14.39□□□□□ -0.11
CDC42SE2-209ENST00000506419 PTSQ03393 145 aa14.39□□□□□ -0.11
CDC42SE2-209ENST00000506419 GBE1Q04446 702 aa14.39□□□□□ -0.11
CDC42SE2-209ENST00000506419 ITKQ08881 620 aa14.39□□□□□ -0.11
CDC42SE2-209ENST00000506419 C3orf38Q5JPI3 329 aa14.39□□□□□ -0.11
CDC42SE2-209ENST00000506419 ARMC12Q5T9G4 340 aa14.39□□□□□ -0.11
CDC42SE2-209ENST00000506419 B3GNT8Q7Z7M8 397 aa14.39□□□□□ -0.11
CDC42SE2-209ENST00000506419 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.39□□□□□ -0.11
CDC42SE2-209ENST00000506419 ARRDC2Q8TBH0 407 aa14.39□□□□□ -0.11
CDC42SE2-209ENST00000506419 GRAMD1AQ96CP6 724 aa14.39□□□□□ -0.11
CDC42SE2-209ENST00000506419 NUS1Q96E22 293 aa14.39□□□□□ -0.11
CDC42SE2-209ENST00000506419 WDR26Q9H7D7 661 aa14.39□□□□□ -0.11
CDC42SE2-209ENST00000506419 SPATS2LQ9NUQ6 558 aaKnown RBP14.39□□□□□ -0.11
CDC42SE2-209ENST00000506419 MOSPD1Q9UJG1 213 aa14.39□□□□□ -0.11
CDC42SE2-209ENST00000506419 FASNP49327 2511 aaKnown RBP14.39□□□□□ -0.11
CDC42SE2-209ENST00000506419 PTPRQQ9UMZ3 2332 aa14.38□□□□□ -0.11
CDC42SE2-209ENST00000506419 SOD1P00441 154 aa14.38□□□□□ -0.11
CDC42SE2-209ENST00000506419 CYP2A6P11509 494 aaPredicted RBP14.38□□□□□ -0.11
CDC42SE2-209ENST00000506419 KELP23276 732 aa14.38□□□□□ -0.11
CDC42SE2-209ENST00000506419 KDELR1P24390 212 aa14.38□□□□□ -0.11
CDC42SE2-209ENST00000506419 CCNCP24863 283 aa14.38□□□□□ -0.11
CDC42SE2-209ENST00000506419 DSC2Q02487 901 aa14.38□□□□□ -0.11
CDC42SE2-209ENST00000506419 MESDQ14696 234 aa14.38□□□□□ -0.11
CDC42SE2-209ENST00000506419 PDK2Q15119 407 aa14.38□□□□□ -0.11
CDC42SE2-209ENST00000506419 IFI16Q16666 785 aaKnown RBP14.38□□□□□ -0.11
CDC42SE2-209ENST00000506419 SPECC1LQ69YQ0 1117 aa14.38□□□□□ -0.11
CDC42SE2-209ENST00000506419 ALG1LQ6GMV1 187 aa14.38□□□□□ -0.11
CDC42SE2-209ENST00000506419 IGF2-ASQ6U949 168 aa14.38□□□□□ -0.11
CDC42SE2-209ENST00000506419 HEATR4Q86WZ0 1026 aa14.38□□□□□ -0.11
CDC42SE2-209ENST00000506419 Q8N9G6 341 aaPredicted RBP14.38□□□□□ -0.11
CDC42SE2-209ENST00000506419 SLC35G2Q8TBE7 412 aa14.38□□□□□ -0.11
CDC42SE2-209ENST00000506419 GPBAR1Q8TDU6 330 aa14.38□□□□□ -0.11
CDC42SE2-209ENST00000506419 FATE1Q969F0 183 aa14.38□□□□□ -0.11
CDC42SE2-209ENST00000506419 AGAP2Q99490 1192 aa14.38□□□□□ -0.11
CDC42SE2-209ENST00000506419 ZNF670Q9BS34 389 aa14.38□□□□□ -0.11
CDC42SE2-209ENST00000506419 FRMD8Q9BZ67 464 aaPredicted RBP14.38□□□□□ -0.11
CDC42SE2-209ENST00000506419 ABCG8Q9H221 673 aa14.38□□□□□ -0.11
CDC42SE2-209ENST00000506419 LRRN3Q9H3W5 708 aa14.38□□□□□ -0.11
CDC42SE2-209ENST00000506419 CD84Q9UIB8 345 aa14.38□□□□□ -0.11
CDC42SE2-209ENST00000506419 CHKBQ9Y259 395 aa14.38□□□□□ -0.11
CDC42SE2-209ENST00000506419 PLEKHM1Q9Y4G2 1056 aa14.38□□□□□ -0.11
CDC42SE2-209ENST00000506419 RNF215Q9Y6U7 377 aa14.38□□□□□ -0.11
CDC42SE2-209ENST00000506419 COL27A1Q8IZC6 1860 aaPredicted RBP14.38□□□□□ -0.11
CDC42SE2-209ENST00000506419 SSU72P8A0A1W2PR75 194 aa14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 PRSS38A1L453 326 aa14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 C3orf70A6NLC5 250 aaPredicted RBP14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 PSMD11O00231 422 aa14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 PDE2AO00408 941 aaPredicted RBP14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 B4GAT1O43505 415 aa14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 FGF1P05230 155 aa14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 RPLP0P05388 317 aaKnown RBP14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 TMEM253P0C7T8 217 aa14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 MYCLP1P12525 358 aaPredicted RBP14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 SKOR1P84550 965 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms