RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 CACNA2D2Q9NY47 1150 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 DKK3Q9UBP4 350 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 IL36AQ9UHA7 158 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 TBK1Q9UHD2 729 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 PPM1HQ9ULR3 514 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 PHTF1Q9UMS5 762 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 STON1Q9Y6Q2 735 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 PIAS3Q9Y6X2 628 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 RGS16O15492 202 aaPredicted RBP10.4□□□□□ -0.74
TPM3-217ENST00000504663 SLC7A4O43246 635 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 TYROBPO43914 113 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 BNIP3LO60238 219 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 WISP3O95389 354 aaPredicted RBP10.4□□□□□ -0.74
TPM3-217ENST00000504663 GOT2P00505 430 aaKnown RBP10.4□□□□□ -0.74
TPM3-217ENST00000504663 COL9A1P20849 921 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 CA4P22748 312 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 HMGCLP35914 325 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 TNFRSF4P43489 277 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 COPAP53621 1224 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 LIMK2P53671 638 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 CSE1LP55060 971 aaKnown RBP10.4□□□□□ -0.74
TPM3-217ENST00000504663 SEMG2Q02383 582 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 CAMK2GQ13555 558 aaPredicted RBP10.4□□□□□ -0.74
TPM3-217ENST00000504663 GRM3Q14832 879 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 PON2Q15165 354 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 TYSND1Q2T9J0 566 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 KDM7AQ6ZMT4 941 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 TIFABQ6ZNK6 161 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 RFLNAQ6ZTI6 216 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 GALNT7Q86SF2 657 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 RALGPS2Q86X27 583 aaPredicted RBP10.4□□□□□ -0.74
TPM3-217ENST00000504663 SPNS2Q8IVW8 549 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 CTAGE3PQ8IX95 158 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 TMIEQ8NEW7 156 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 OR4K2Q8NGD2 314 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 GPR150Q8NGU9 434 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 HCAR2Q8TDS4 363 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 CSGALNACT1Q8TDX6 532 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 HDAC10Q969S8 669 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 FAM131CQ96AQ9 280 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 SCRN2Q96FV2 425 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 CDKN2AIPNLQ96HQ2 116 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 SGSM3Q96HU1 749 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 LRIG1Q96JA1 1093 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 CPNE1Q99829 537 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 C19orf43Q9BQ61 176 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 CCDC77Q9BR77 488 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 OSBPL1AQ9BXW6 950 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 TRABDQ9H4I3 376 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 HACD3Q9P035 362 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 B4GALT6Q9UBX8 382 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 FKBPLQ9UIM3 349 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 ACTL7BQ9Y614 415 aa10.4□□□□□ -0.74
TPM3-217ENST00000504663 ATG2BQ96BY7 2078 aa10.4□□□□□ -0.75
TPM3-217ENST00000504663 A0A1W2PQF6 199 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 C16orf96A6NNT2 1141 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 UPK3BL1B0FP48 263 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 TRIM49D1C9J1S8 452 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 UPK3BL2E5RIL1 263 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 PLK4O00444 970 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 AREL1O15033 823 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 GPR39O43194 453 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 CLDN7O95471 211 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 S1PR4O95977 384 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 AHSGP02765 367 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 ALDOAP04075 364 aaKnown RBP10.39□□□□□ -0.75
TPM3-217ENST00000504663 INHBAP08476 426 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 SRFP11831 508 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 NR1D1P20393 614 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 LPOP22079 712 aaPredicted RBP10.39□□□□□ -0.75
TPM3-217ENST00000504663 ITGB7P26010 798 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 DRD3P35462 400 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 GMPRP36959 345 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 MMP12P39900 470 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 GP5P40197 560 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 STC1P52823 247 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 ST8SIA6P61647 398 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 TMPRSS15P98073 1019 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 TIAL1Q01085 375 aaKnown RBP eCLIP10.39□□□□□ -0.75
TPM3-217ENST00000504663 PTSQ03393 145 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 SLC18A2Q05940 514 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 ZP2Q05996 745 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 CTBP1Q13363 440 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 CCINQ13939 588 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 ELAVL3Q14576 367 aaKnown RBP10.39□□□□□ -0.75
TPM3-217ENST00000504663 UGP2Q16851 508 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 ZNF805Q5CZA5 627 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 LRRC66Q68CR7 880 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 KIAA1211LQ6NV74 962 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 NEPROQ6NW34 567 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 BRAT1Q6PJG6 821 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 SERPINA13PQ6UXR4 307 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 TPRG1Q6ZUI0 275 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 DPPA4Q7L190 304 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 LDB1Q86U70 411 aaPredicted RBP10.39□□□□□ -0.75
TPM3-217ENST00000504663 ZC3HC1Q86WB0 502 aaKnown RBP10.39□□□□□ -0.75
TPM3-217ENST00000504663 CILP2Q8IUL8 1156 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 PIANPQ8IYJ0 282 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 IL17RCQ8NAC3 791 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 PIP4K2CQ8TBX8 421 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms