RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 CAPN14A8MX76 684 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 TK2O00142 265 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 SLC7A4O43246 635 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 EPOP01588 193 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 FGF1P05230 155 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 SBK3P0C264 359 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 ESRRAP11474 423 aaPredicted RBP11.61□□□□□ -0.55
USP46-204ENST00000503060 ALOX15P16050 662 aaPredicted RBP11.61□□□□□ -0.55
USP46-204ENST00000503060 HOXD11P31277 338 aaPredicted RBP11.61□□□□□ -0.55
USP46-204ENST00000503060 LEPRP48357 1165 aaKnown RBP11.61□□□□□ -0.55
USP46-204ENST00000503060 PFKPQ01813 784 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 POU4F1Q01851 419 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 TUBB3Q13509 450 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 RAB33AQ14088 237 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 BTG3Q14201 252 aaPredicted RBP11.61□□□□□ -0.55
USP46-204ENST00000503060 VEPH1Q14D04 833 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 CHST9Q7L1S5 443 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 MAVSQ7Z434 540 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 TREML1Q86YW5 311 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 DIS3LQ8TF46 1054 aaKnown RBP11.61□□□□□ -0.55
USP46-204ENST00000503060 STYXQ8WUJ0 223 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 WBP2Q969T9 261 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 THAP11Q96EK4 314 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 MGME1Q9BQP7 344 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 BTBD10Q9BSF8 475 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 GATA5Q9BWX5 397 aaPredicted RBP11.61□□□□□ -0.55
USP46-204ENST00000503060 KLF16Q9BXK1 252 aaPredicted RBP11.61□□□□□ -0.55
USP46-204ENST00000503060 RNF38Q9H0F5 515 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 MFSD1Q9H3U5 465 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 RC3H2Q9HBD1 1191 aaKnown RBP11.61□□□□□ -0.55
USP46-204ENST00000503060 DNAJC28Q9NX36 388 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 UBA2Q9UBT2 640 aaPredicted RBP11.61□□□□□ -0.55
USP46-204ENST00000503060 SEPT3Q9UH03 358 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 ACTL7AQ9Y615 435 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 CHD5Q8TDI0 1954 aa11.61□□□□□ -0.55
USP46-204ENST00000503060 A0A087X1B8 175 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.6□□□□□ -0.55
USP46-204ENST00000503060 ABHD14A-ACY1A0A1B0GW23 586 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 ILVBLA1L0T0 632 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 C2orf78A6NCI8 922 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 LDB2O43679 373 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 KDELR3O43731 214 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 HSPA4LO95757 839 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 RHOCP08134 193 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 SERPINA6P08185 405 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 IRF1P10914 325 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 MTHFD1P11586 935 aaKnown RBP11.6□□□□□ -0.55
USP46-204ENST00000503060 GLRBP48167 497 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 SGSHP51688 502 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 ARSDP51689 593 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 CLCN5P51795 746 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 PRKAA2P54646 552 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 OXCT1P55809 520 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 RAC1P63000 192 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 TUBA1BP68363 451 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 DEFB103AP81534 67 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 ZNF789Q5FWF6 425 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 RBM20Q5T481 1227 aaKnown RBP11.6□□□□□ -0.55
USP46-204ENST00000503060 LRRC8EQ6NSJ5 796 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 TUBA1AQ71U36 451 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 GALNT7Q86SF2 657 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 TTC8Q8TAM2 541 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 HDAC10Q969S8 669 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 NXNL1Q96CM4 212 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 GPR78Q96P69 363 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 MIPEPQ99797 713 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 OMDQ99983 421 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 FAM126AQ9BYI3 521 aaPredicted RBP11.6□□□□□ -0.55
USP46-204ENST00000503060 TUBA8Q9NY65 449 aaPredicted RBP11.6□□□□□ -0.55
USP46-204ENST00000503060 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.6□□□□□ -0.55
USP46-204ENST00000503060 AGO1Q9UL18 857 aaKnown RBP11.6□□□□□ -0.55
USP46-204ENST00000503060 KCTD3Q9Y597 815 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.6□□□□□ -0.55
USP46-204ENST00000503060 FAM221BA6H8Z2 402 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 TARM1B6A8C7 271 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 ZNF195O14628 629 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 PRRG1O14668 218 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 KLHL2O95198 593 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 URODP06132 367 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 SERPINF2P08697 491 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 ALDH18A1P54886 795 aaKnown RBP11.6□□□□□ -0.55
USP46-204ENST00000503060 SLC12A2P55011 1212 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 LRRC74AQ0VAA2 488 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 TWF1Q12792 350 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 DLG1Q12959 904 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 ZNF177Q13360 481 aaPredicted RBP11.6□□□□□ -0.55
USP46-204ENST00000503060 SLC14A2Q15849 920 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 INAQ16352 499 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 ADGRF1Q5T601 910 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 LIPMQ5VYY2 423 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 PTAR1Q7Z6K3 402 aaPredicted RBP11.6□□□□□ -0.55
USP46-204ENST00000503060 FSTL5Q8N475 847 aaPredicted RBP11.6□□□□□ -0.55
USP46-204ENST00000503060 OR6P1Q8NGX9 317 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 PSKH2Q96QS6 385 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 CINPQ9BW66 212 aaPredicted RBP11.6□□□□□ -0.55
USP46-204ENST00000503060 CCDC106Q9BWC9 280 aa11.6□□□□□ -0.55
USP46-204ENST00000503060 REPIN1Q9BWE0 567 aaKnown RBP11.6□□□□□ -0.55
USP46-204ENST00000503060 CADM1Q9BY67 442 aaKnown RBP11.6□□□□□ -0.55
USP46-204ENST00000503060 PAPOLBQ9NRJ5 636 aaKnown RBP11.6□□□□□ -0.55
USP46-204ENST00000503060 SPG21Q9NZD8 308 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms