RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 ARHGEF40Q8TER5 1519 aa5.41□□□□□ -1.54
HMGB1P3-201ENST00000502802 LOC102723996A0A087X1L8 192 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 LOC100996750A0A140TA64 210 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 A0A1W2PR77 199 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 C1orf226A1L170 272 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 LINC01548A6NM66 108 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 OGG1O15527 345 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 PSMD10O75832 226 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 RGS11O94810 467 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 CLDN7O95471 211 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 TPOP07202 933 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 MMP9P14780 707 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 CPT2P23786 658 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 CHATP28329 748 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 ACADLP28330 430 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 DCTDP32321 178 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 CTNNA1P35221 906 aaKnown RBP5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 PRCPP42785 496 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 SUOXP51687 545 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 MRPS34P82930 218 aaKnown RBP5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 SNTB1Q13884 538 aaKnown RBP5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 COG2Q14746 738 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 C2orf68Q2NKX9 166 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 SMTNL2Q2TAL5 461 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 CRY2Q49AN0 593 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 ZNF628Q5EBL2 1059 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 C6orf10Q5SRN2 563 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 RARS2Q5T160 578 aaKnown RBP5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 HEPHL1Q6MZM0 1159 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 TMEM71Q6P5X7 295 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 TRILQ7L0X0 811 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 CHST3Q7LGC8 479 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 CCDC186Q7Z3E2 898 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 AACSQ86V21 672 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 EPHX4Q8IUS5 362 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 MCEMP1Q8IX19 187 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 ZBTB8BQ8NAP8 495 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 Q8NFD4 153 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 OR8K5Q8NH50 307 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 IGFBPL1Q8WX77 278 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 CCDC106Q9BWC9 280 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 KRTAP4-6Q9BYQ5 205 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 NPFFR1Q9GZQ6 430 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 PDGFCQ9NRA1 345 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 PAG1Q9NWQ8 432 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 KLHL13Q9P2N7 655 aa5.4□□□□□ -1.54
HMGB1P3-201ENST00000502802 SOS1Q07889 1333 aaPredicted RBP5.4□□□□□ -1.55
HMGB1P3-201ENST00000502802 PDS5BQ9NTI5 1447 aa5.4□□□□□ -1.55
HMGB1P3-201ENST00000502802 A0A1B0GVM2 712 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 TCRBV21S2A2A0A5A6 115 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 TMEM202A6NGA9 273 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 LRRC3CA6NJW4 275 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 STMND1H3BQB6 276 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 IGLV2-14P01704 120 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 CBSLP0DN79 551 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 CTSAP10619 480 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 CBSP35520 551 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 THPOP40225 353 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 PTH2RP49190 550 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 CDH12P55289 794 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 PPARDQ03181 441 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 GAD2Q05329 585 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 ALCAMQ13740 583 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 DCAF6Q58WW2 860 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 PAPD7Q5XG87 772 aaKnown RBP5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 ZNF782Q6ZMW2 699 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 MRGPRGQ86SM5 289 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 LDLRAD3Q86YD5 345 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 CAMK1DQ8IU85 385 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 ARID3BQ8IVW6 561 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 SFTPA2Q8IWL1 248 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 SCYL3Q8IZE3 742 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 MMP21Q8N119 569 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 GALNT16Q8N428 558 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 SCCPDHQ8NBX0 429 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 SLC44A5Q8NCS7 719 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 OR6J1Q8NGC5 347 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 PTPMT1Q8WUK0 201 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 TMEM18Q96B42 140 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 VMP1Q96GC9 406 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 PCGF1Q9BSM1 259 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 ANKRD2Q9GZV1 360 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 DENND2DQ9H6A0 471 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 GRPEL1Q9HAV7 217 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 CYSLTR2Q9NS75 346 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 CISD1Q9NZ45 108 aaKnown RBP5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 COPG2Q9UBF2 871 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 AMACRQ9UHK6 382 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 HS3ST3A1Q9Y663 406 aa5.39□□□□□ -1.55
HMGB1P3-201ENST00000502802 PRDM2Q13029 1718 aa5.38□□□□□ -1.55
HMGB1P3-201ENST00000502802 TRBC2A0A5B9 178 aa5.38□□□□□ -1.55
HMGB1P3-201ENST00000502802 URADA6NGE7 173 aa5.38□□□□□ -1.55
HMGB1P3-201ENST00000502802 H3BQ06 376 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P3-201ENST00000502802 MATN3O15232 486 aa5.38□□□□□ -1.55
HMGB1P3-201ENST00000502802 ZC3H11AO75152 810 aaKnown RBP eCLIP5.38□□□□□ -1.55
HMGB1P3-201ENST00000502802 HSP90AB1P08238 724 aaKnown RBP5.38□□□□□ -1.55
HMGB1P3-201ENST00000502802 CCDC175P0C221 793 aa5.38□□□□□ -1.55
HMGB1P3-201ENST00000502802 IFNAR1P17181 557 aa5.38□□□□□ -1.55
HMGB1P3-201ENST00000502802 MYF6P23409 242 aa5.38□□□□□ -1.55
HMGB1P3-201ENST00000502802 AVPR1AP37288 418 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms