RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 NAGLUP54802 743 aa14.58□□□□□ -0.08
NEAT1-201ENST00000499732 PKNOX1P55347 436 aa14.58□□□□□ -0.08
NEAT1-201ENST00000499732 PTK2BQ14289 1009 aa14.58□□□□□ -0.08
NEAT1-201ENST00000499732 USP10Q14694 798 aaKnown RBP14.58□□□□□ -0.08
NEAT1-201ENST00000499732 PPP2R5DQ14738 602 aa14.58□□□□□ -0.08
NEAT1-201ENST00000499732 MAPRE2Q15555 327 aa14.58□□□□□ -0.08
NEAT1-201ENST00000499732 MYLK3Q32MK0 819 aa14.58□□□□□ -0.08
NEAT1-201ENST00000499732 MGAT5BQ3V5L5 792 aa14.58□□□□□ -0.08
NEAT1-201ENST00000499732 KLC3Q6P597 504 aa14.58□□□□□ -0.08
NEAT1-201ENST00000499732 LINC00523Q86TU6 105 aa14.58□□□□□ -0.08
NEAT1-201ENST00000499732 CNTN4Q8IWV2 1026 aa14.58□□□□□ -0.08
NEAT1-201ENST00000499732 LSMEM2Q8N112 164 aa14.58□□□□□ -0.08
NEAT1-201ENST00000499732 ACVR1CQ8NER5 493 aa14.58□□□□□ -0.08
NEAT1-201ENST00000499732 RIN3Q8TB24 985 aa14.58□□□□□ -0.08
NEAT1-201ENST00000499732 SCYL1Q96KG9 808 aa14.58□□□□□ -0.08
NEAT1-201ENST00000499732 SPATA17Q96L03 361 aa14.58□□□□□ -0.08
NEAT1-201ENST00000499732 KLHL32Q96NJ5 620 aa14.58□□□□□ -0.08
NEAT1-201ENST00000499732 PRPF18Q99633 342 aaKnown RBP14.58□□□□□ -0.08
NEAT1-201ENST00000499732 SEPT5Q99719 369 aaPredicted RBP14.58□□□□□ -0.08
NEAT1-201ENST00000499732 HAUS8Q9BT25 410 aa14.58□□□□□ -0.08
NEAT1-201ENST00000499732 KIFC1Q9BW19 673 aa14.58□□□□□ -0.08
NEAT1-201ENST00000499732 TCAF2A6NFQ2 919 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 FGF18O76093 207 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 PSMC3P17980 439 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 NFKB1P19838 968 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 YWHAQP27348 245 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 ABCG1P45844 678 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 KPNA2P52292 529 aaKnown RBP14.57□□□□□ -0.08
NEAT1-201ENST00000499732 GALNT2Q10471 571 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 PRPSAP1Q14558 356 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 ARTNQ5T4W7 220 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 IRAK1BP1Q5VVH5 260 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 PPP2R2DQ66LE6 453 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 NXNQ6DKJ4 435 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 CHERPQ8IWX8 916 aaKnown RBP14.57□□□□□ -0.08
NEAT1-201ENST00000499732 FSTL5Q8N475 847 aaPredicted RBP14.57□□□□□ -0.08
NEAT1-201ENST00000499732 ZFP28Q8NHY6 868 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 USP13Q92995 863 aaPredicted RBP14.57□□□□□ -0.08
NEAT1-201ENST00000499732 CEP295NLQ96MC4 621 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 SERPINB11Q96P15 392 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 CLSTN3Q9BQT9 956 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 NKX2-4Q9H2Z4 354 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 CHRAC1Q9NRG0 131 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.57□□□□□ -0.084e-26■□□□□ 9.6
NEAT1-201ENST00000499732 HSFX1Q9UBD0 423 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 APPL1Q9UKG1 709 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 SARDHQ9UL12 918 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 RUVBL2Q9Y230 463 aaKnown RBP14.57□□□□□ -0.08
NEAT1-201ENST00000499732 GMEB1Q9Y692 573 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 MYLKQ15746 1914 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 CCDC160A6NGH7 325 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 KCNU1A8MYU2 1149 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 PAGE1O75459 146 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 NMBRP28336 390 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 TXNL4AP83876 142 aaKnown RBP14.57□□□□□ -0.08
NEAT1-201ENST00000499732 CDKL1Q00532 357 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 CREMQ03060 361 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 ZNF33AQ06730 810 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 ZBTB17Q13105 803 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 DUSP4Q13115 394 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 TJAP1Q5JTD0 557 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 C6orf52Q5T4I8 152 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 MANEALQ5VSG8 457 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 TMEM198Q66K66 360 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 TPGS2Q68CL5 300 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 PIWIL4Q7Z3Z4 852 aaKnown RBP14.57□□□□□ -0.08
NEAT1-201ENST00000499732 CENPLQ8N0S6 344 aaPredicted RBP14.57□□□□□ -0.08
NEAT1-201ENST00000499732 PELI3Q8N2H9 469 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 KDM1BQ8NB78 822 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 CEP70Q8NHQ1 597 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 ZNF461Q8TAF7 563 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 KCTD4Q8WVF5 259 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 FBXO32Q969P5 355 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 DUS3LQ96G46 650 aaKnown RBP14.57□□□□□ -0.08
NEAT1-201ENST00000499732 SLC39A13Q96H72 371 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 FAR2Q96K12 515 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 PPP1R36Q96LQ0 422 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 ZNF597Q96LX8 424 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 MRPL1Q9BYD6 325 aaKnown RBP14.57□□□□□ -0.08
NEAT1-201ENST00000499732 MRPL17Q9NRX2 175 aaKnown RBP14.57□□□□□ -0.08
NEAT1-201ENST00000499732 COMMD8Q9NX08 183 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 NCKIPSDQ9NZQ3 722 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 XPR1Q9UBH6 696 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 AFF4Q9UHB7 1163 aaKnown RBP14.57□□□□□ -0.08
NEAT1-201ENST00000499732 PCDHGB4Q9UN71 923 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 G3BP2Q9UN86 482 aaKnown RBP14.57□□□□□ -0.08
NEAT1-201ENST00000499732 ACOT9Q9Y305 439 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 RWDD3Q9Y3V2 267 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 PCDHGB5Q9Y5G0 923 aa14.57□□□□□ -0.08
NEAT1-201ENST00000499732 PHGDHO43175 533 aaKnown RBP14.56□□□□□ -0.08
NEAT1-201ENST00000499732 DLX3O60479 287 aa14.56□□□□□ -0.08
NEAT1-201ENST00000499732 RNASEH2AO75792 299 aaKnown RBP14.56□□□□□ -0.08
NEAT1-201ENST00000499732 ABLIM3O94929 683 aa14.56□□□□□ -0.08
NEAT1-201ENST00000499732 F7P08709 466 aaPredicted RBP14.56□□□□□ -0.08
NEAT1-201ENST00000499732 ATP6V1B1P15313 513 aa14.56□□□□□ -0.08
NEAT1-201ENST00000499732 ZNF26P17031 533 aaPredicted RBP14.56□□□□□ -0.08
NEAT1-201ENST00000499732 RPL17P18621 184 aaKnown RBP14.56□□□□□ -0.08
NEAT1-201ENST00000499732 ATF6P18850 670 aa14.56□□□□□ -0.08
NEAT1-201ENST00000499732 HOXC13P31276 330 aa14.56□□□□□ -0.08
NEAT1-201ENST00000499732 CCR10P46092 362 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms