RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 HNRNPRO43390 633 aaKnown RBP5.62□□□□□ -1.51
SPTA1-209ENST00000498708 PLRG1O43660 514 aaKnown RBP5.62□□□□□ -1.51
SPTA1-209ENST00000498708 DUX1O43812 170 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 SNAP91O60641 907 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 CNTN5O94779 1100 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 PCDH8O95206 1070 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 SMC2O95347 1197 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 ADCY5O95622 1261 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 MT-CO1P00395 513 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 JMJD7P0C870 316 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 CD8BP10966 210 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 RRM1P23921 792 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 GNA15P30679 374 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 ACADSBP45954 432 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 DNA2P51530 1060 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 MAPK10P53779 464 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 TAS2R38P59533 333 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 YWHAZP63104 245 aaKnown RBP5.62□□□□□ -1.51
SPTA1-209ENST00000498708 CDK17Q00537 523 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 LRRC63Q05C16 580 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 CETN1Q12798 172 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 OVGP1Q12889 678 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 STIM1Q13586 685 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 AUHQ13825 339 aaKnown RBP5.62□□□□□ -1.51
SPTA1-209ENST00000498708 SPIDRQ14159 915 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 ELAVL3Q14576 367 aaKnown RBP5.62□□□□□ -1.51
SPTA1-209ENST00000498708 TESK1Q15569 626 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 DEFB133Q30KQ1 61 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 SETMARQ53H47 684 aaPredicted RBP5.62□□□□□ -1.51
SPTA1-209ENST00000498708 RABGAP1LQ5R372 815 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 AGBL4Q5VU57 503 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 FAM46CQ5VWP2 391 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 CXorf57Q6NSI4 855 aaKnown RBP5.62□□□□□ -1.51
SPTA1-209ENST00000498708 ZCCHC8Q6NZY4 707 aaKnown RBP5.62□□□□□ -1.51
SPTA1-209ENST00000498708 FBXL22Q6P050 247 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 LINGO4Q6UY18 593 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 TIPARPQ7Z3E1 657 aaKnown RBP5.62□□□□□ -1.51
SPTA1-209ENST00000498708 PTAR1Q7Z6K3 402 aaPredicted RBP5.62□□□□□ -1.51
SPTA1-209ENST00000498708 DSG4Q86SJ6 1040 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 WFDC3Q8IUB2 231 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 SLC34A3Q8N130 599 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 SLC22A18ASQ8N1D0 253 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 ATP11CQ8NB49 1132 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 KDM1BQ8NB78 822 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 CHST14Q8NCH0 376 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 LMO3Q8TAP4 145 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 GRIN3AQ8TCU5 1115 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 FRS2Q8WU20 508 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 NELFBQ8WX92 580 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 NKD1Q969G9 470 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 ISL2Q96A47 359 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 PPP1R13BQ96KQ4 1090 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 BTN2A3PQ96KV6 586 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 PRMT1Q99873 361 aaKnown RBP5.62□□□□□ -1.51
SPTA1-209ENST00000498708 CCDC3Q9BQI4 270 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 CRACR2AQ9BSW2 395 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 TNKS2Q9H2K2 1166 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 PLCB1Q9NQ66 1216 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 PRDM8Q9NQV8 689 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.62□□□□□ -1.51
SPTA1-209ENST00000498708 DCTN4Q9UJW0 460 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 MAN1B1Q9UKM7 699 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 PPM1HQ9ULR3 514 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 DMTF1Q9Y222 760 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 LOXL2Q9Y4K0 774 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 HS3ST4Q9Y661 456 aa5.62□□□□□ -1.51
SPTA1-209ENST00000498708 A0A1W2PQC6 194 aa5.61□□□□□ -1.51
SPTA1-209ENST00000498708 TCAF2A6NFQ2 919 aa5.61□□□□□ -1.51
SPTA1-209ENST00000498708 EFCAB7A8K855 629 aa5.61□□□□□ -1.51
SPTA1-209ENST00000498708 TCP11X1B4DZS4 312 aa5.61□□□□□ -1.51
SPTA1-209ENST00000498708 M0QYT0 321 aa5.61□□□□□ -1.51
SPTA1-209ENST00000498708 PSMA7O14818 248 aa5.61□□□□□ -1.51
SPTA1-209ENST00000498708 MCF2LO15068 1137 aa5.61□□□□□ -1.51
SPTA1-209ENST00000498708 MED7O43513 233 aa5.61□□□□□ -1.51
SPTA1-209ENST00000498708 SMAD6O43541 496 aaKnown RBP5.61□□□□□ -1.51
SPTA1-209ENST00000498708 LEFTY1O75610 366 aa5.61□□□□□ -1.51
SPTA1-209ENST00000498708 CEACAM5P06731 702 aa5.61□□□□□ -1.51
SPTA1-209ENST00000498708 CTSLP07711 333 aa5.61□□□□□ -1.51
SPTA1-209ENST00000498708 RHOCP08134 193 aa5.61□□□□□ -1.51
SPTA1-209ENST00000498708 PNMA6AP0CW24 399 aaPredicted RBP5.61□□□□□ -1.51
SPTA1-209ENST00000498708 PRKAR1AP10644 381 aa5.61□□□□□ -1.51
SPTA1-209ENST00000498708 SRCP12931 536 aa5.61□□□□□ -1.51
SPTA1-209ENST00000498708 SLC9A1P19634 815 aa5.61□□□□□ -1.51
SPTA1-209ENST00000498708 AKT2P31751 481 aa5.61□□□□□ -1.51
SPTA1-209ENST00000498708 CCR1P32246 355 aa5.61□□□□□ -1.51
SPTA1-209ENST00000498708 CHRNA3P32297 505 aa5.61□□□□□ -1.51
SPTA1-209ENST00000498708 SULT1E1P49888 294 aa5.61□□□□□ -1.51
SPTA1-209ENST00000498708 RNASE9P60153 205 aaKnown RBP5.61□□□□□ -1.51
SPTA1-209ENST00000498708 SULT2A1Q06520 285 aa5.61□□□□□ -1.51
SPTA1-209ENST00000498708 EIF3IQ13347 325 aaKnown RBP5.61□□□□□ -1.51
SPTA1-209ENST00000498708 PDCLQ13371 301 aa5.61□□□□□ -1.51
SPTA1-209ENST00000498708 C1orf61Q13536 156 aa5.61□□□□□ -1.51
SPTA1-209ENST00000498708 SLC12A1Q13621 1099 aa5.61□□□□□ -1.51
SPTA1-209ENST00000498708 NR0B2Q15466 257 aa5.61□□□□□ -1.51
SPTA1-209ENST00000498708 TCEA2Q15560 299 aa5.61□□□□□ -1.51
SPTA1-209ENST00000498708 ZXDCQ2QGD7 858 aaPredicted RBP5.61□□□□□ -1.51
SPTA1-209ENST00000498708 DEFB109BQ30KR1 87 aa5.61□□□□□ -1.51
SPTA1-209ENST00000498708 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.61□□□□□ -1.51
SPTA1-209ENST00000498708 PIP5KL1Q5T9C9 394 aa5.61□□□□□ -1.51
SPTA1-209ENST00000498708 TMCO4Q5TGY1 634 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms