RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 LIMK2P53671 638 aa14.71□□□□□ -0.05
TRAF4-212ENST00000498540 TPI1P60174 286 aa14.71□□□□□ -0.05
TRAF4-212ENST00000498540 POLR2FP61218 127 aaKnown RBP14.71□□□□□ -0.05
TRAF4-212ENST00000498540 RPL7AP62424 266 aaKnown RBP14.71□□□□□ -0.05
TRAF4-212ENST00000498540 UBAP2LQ14157 1087 aaKnown RBP14.71□□□□□ -0.05
TRAF4-212ENST00000498540 ACOX1Q15067 660 aa14.71□□□□□ -0.05
TRAF4-212ENST00000498540 IGFBP7Q16270 282 aa14.71□□□□□ -0.05
TRAF4-212ENST00000498540 CLEC16AQ2KHT3 1053 aa14.71□□□□□ -0.05
TRAF4-212ENST00000498540 NKAIN2Q5VXU1 208 aa14.71□□□□□ -0.05
TRAF4-212ENST00000498540 SLC30A9Q6PML9 568 aa14.71□□□□□ -0.05
TRAF4-212ENST00000498540 HEATR4Q86WZ0 1026 aa14.71□□□□□ -0.05
TRAF4-212ENST00000498540 PHF13Q86YI8 300 aaPredicted RBP14.71□□□□□ -0.05
TRAF4-212ENST00000498540 PAF1Q8N7H5 531 aa14.71□□□□□ -0.05
TRAF4-212ENST00000498540 COQ10AQ96MF6 247 aa14.71□□□□□ -0.05
TRAF4-212ENST00000498540 MCEEQ96PE7 176 aa14.71□□□□□ -0.05
TRAF4-212ENST00000498540 GSDMCQ9BYG8 508 aa14.71□□□□□ -0.05
TRAF4-212ENST00000498540 SLC39A8Q9C0K1 460 aa14.71□□□□□ -0.05
TRAF4-212ENST00000498540 NLRC4Q9NPP4 1024 aa14.71□□□□□ -0.05
TRAF4-212ENST00000498540 GPATCH2LQ9NWQ4 482 aa14.71□□□□□ -0.05
TRAF4-212ENST00000498540 TAB2Q9NYJ8 693 aa14.71□□□□□ -0.05
TRAF4-212ENST00000498540 TMEM9Q9P0T7 183 aa14.71□□□□□ -0.05
TRAF4-212ENST00000498540 SEPT3Q9UH03 358 aa14.71□□□□□ -0.05
TRAF4-212ENST00000498540 TRAFD1O14545 582 aaPredicted RBP14.7□□□□□ -0.06
TRAF4-212ENST00000498540 PALMO75781 387 aa14.7□□□□□ -0.06
TRAF4-212ENST00000498540 CALB1P05937 261 aa14.7□□□□□ -0.06
TRAF4-212ENST00000498540 THRAP10827 490 aa14.7□□□□□ -0.06
TRAF4-212ENST00000498540 GNPDA1P46926 289 aa14.7□□□□□ -0.06
TRAF4-212ENST00000498540 NDST2P52849 883 aa14.7□□□□□ -0.06
TRAF4-212ENST00000498540 AIF1P55008 147 aa14.7□□□□□ -0.06
TRAF4-212ENST00000498540 FOXK1P85037 733 aa14.7□□□□□ -0.06
TRAF4-212ENST00000498540 BCL2L1Q07817 233 aa14.7□□□□□ -0.06
TRAF4-212ENST00000498540 ILF3Q12906 894 aaKnown RBP eCLIP14.7□□□□□ -0.06
TRAF4-212ENST00000498540 BECN1Q14457 450 aa14.7□□□□□ -0.06
TRAF4-212ENST00000498540 CLPPQ16740 277 aaPredicted RBP14.7□□□□□ -0.06
TRAF4-212ENST00000498540 TCP11X2Q5H9J9 407 aa14.7□□□□□ -0.06
TRAF4-212ENST00000498540 ARHGAP36Q6ZRI8 547 aa14.7□□□□□ -0.06
TRAF4-212ENST00000498540 MON1BQ7L1V2 547 aa14.7□□□□□ -0.06
TRAF4-212ENST00000498540 CACNA2D3Q8IZS8 1091 aa14.7□□□□□ -0.06
TRAF4-212ENST00000498540 NAGSQ8N159 534 aa14.7□□□□□ -0.06
TRAF4-212ENST00000498540 OR4D9Q8NGE8 314 aa14.7□□□□□ -0.06
TRAF4-212ENST00000498540 NUS1Q96E22 293 aa14.7□□□□□ -0.06
TRAF4-212ENST00000498540 DDA1Q9BW61 102 aa14.7□□□□□ -0.06
TRAF4-212ENST00000498540 CINPQ9BW66 212 aaPredicted RBP14.7□□□□□ -0.06
TRAF4-212ENST00000498540 FRMD8Q9BZ67 464 aaPredicted RBP14.7□□□□□ -0.06
TRAF4-212ENST00000498540 CDH19Q9H159 772 aa14.7□□□□□ -0.06
TRAF4-212ENST00000498540 FAM207AQ9NSI2 230 aaPredicted RBP14.7□□□□□ -0.06
TRAF4-212ENST00000498540 B4GALT6Q9UBX8 382 aa14.7□□□□□ -0.06
TRAF4-212ENST00000498540 TUBD1Q9UJT1 453 aa14.7□□□□□ -0.06
TRAF4-212ENST00000498540 SUFUQ9UMX1 484 aa14.7□□□□□ -0.06
TRAF4-212ENST00000498540 IGHV1OR21-1A0A087WYE8 117 aa14.69□□□□□ -0.06
TRAF4-212ENST00000498540 ARHGAP42A6NI28 874 aa14.69□□□□□ -0.06
TRAF4-212ENST00000498540 PDE2AO00408 941 aaPredicted RBP14.69□□□□□ -0.06
TRAF4-212ENST00000498540 PPM1DO15297 605 aa14.69□□□□□ -0.06
TRAF4-212ENST00000498540 ERCC5P28715 1186 aaPredicted RBP14.69□□□□□ -0.06
TRAF4-212ENST00000498540 CASRP41180 1078 aa14.69□□□□□ -0.06
TRAF4-212ENST00000498540 GPR3P46089 330 aa14.69□□□□□ -0.06
TRAF4-212ENST00000498540 CCR10P46092 362 aa14.69□□□□□ -0.06
TRAF4-212ENST00000498540 OGDHQ02218 1023 aa14.69□□□□□ -0.06
TRAF4-212ENST00000498540 TRA2AQ13595 282 aaKnown RBP eCLIP14.69□□□□□ -0.06
TRAF4-212ENST00000498540 CNGA3Q16281 694 aa14.69□□□□□ -0.06
TRAF4-212ENST00000498540 DNAJC24Q6P3W2 148 aa14.69□□□□□ -0.06
TRAF4-212ENST00000498540 ARHGAP12Q8IWW6 846 aa14.69□□□□□ -0.06
TRAF4-212ENST00000498540 AGBL5Q8NDL9 886 aa14.69□□□□□ -0.06
TRAF4-212ENST00000498540 CCDC112Q8NEF3 446 aa14.69□□□□□ -0.06
TRAF4-212ENST00000498540 TEX101Q9BY14 249 aa14.69□□□□□ -0.06
TRAF4-212ENST00000498540 VPS16Q9H269 839 aa14.69□□□□□ -0.06
TRAF4-212ENST00000498540 PHPT1Q9NRX4 125 aaPredicted RBP14.69□□□□□ -0.06
TRAF4-212ENST00000498540 TRNAU1APQ9NX07 287 aaKnown RBP14.69□□□□□ -0.06
TRAF4-212ENST00000498540 OCIAD1Q9NX40 245 aa14.69□□□□□ -0.06
TRAF4-212ENST00000498540 SLC39A1Q9NY26 324 aa14.69□□□□□ -0.06
TRAF4-212ENST00000498540 TTC24A2A3L6 582 aaPredicted RBP14.68□□□□□ -0.06
TRAF4-212ENST00000498540 CLEC18AA5D8T8 446 aa14.68□□□□□ -0.06
TRAF4-212ENST00000498540 ZNF891A8MT65 544 aaPredicted RBP14.68□□□□□ -0.06
TRAF4-212ENST00000498540 DUX1O43812 170 aa14.68□□□□□ -0.06
TRAF4-212ENST00000498540 RAD1O60671 282 aa14.68□□□□□ -0.06
TRAF4-212ENST00000498540 CSTF2P33240 577 aaKnown RBP eCLIP14.68□□□□□ -0.06
TRAF4-212ENST00000498540 HTR7P34969 479 aa14.68□□□□□ -0.06
TRAF4-212ENST00000498540 POLD2P49005 469 aa14.68□□□□□ -0.06
TRAF4-212ENST00000498540 SCNN1BP51168 640 aa14.68□□□□□ -0.06
TRAF4-212ENST00000498540 UBE2HP62256 183 aa14.68□□□□□ -0.06
TRAF4-212ENST00000498540 POLR2LP62875 67 aaKnown RBP14.68□□□□□ -0.06
TRAF4-212ENST00000498540 CDK3Q00526 305 aa14.68□□□□□ -0.06
TRAF4-212ENST00000498540 CTBSQ01459 385 aa14.68□□□□□ -0.06
TRAF4-212ENST00000498540 BIRC2Q13490 618 aa14.68□□□□□ -0.06
TRAF4-212ENST00000498540 CA9Q16790 459 aa14.68□□□□□ -0.06
TRAF4-212ENST00000498540 PPP1R15BQ5SWA1 713 aa14.68□□□□□ -0.06
TRAF4-212ENST00000498540 DENND2CQ68D51 928 aa14.68□□□□□ -0.06
TRAF4-212ENST00000498540 ANKS6Q68DC2 871 aa14.68□□□□□ -0.06
TRAF4-212ENST00000498540 CLEC18BQ6UXF7 455 aa14.68□□□□□ -0.06
TRAF4-212ENST00000498540 FAM129CQ86XR2 697 aa14.68□□□□□ -0.06
TRAF4-212ENST00000498540 NPWQ8N729 165 aa14.68□□□□□ -0.06
TRAF4-212ENST00000498540 CLEC18CQ8NCF0 446 aa14.68□□□□□ -0.06
TRAF4-212ENST00000498540 CNPY3Q9BT09 278 aa14.68□□□□□ -0.06
TRAF4-212ENST00000498540 SP110Q9HB58 689 aa14.68□□□□□ -0.06
TRAF4-212ENST00000498540 ZNF71Q9NQZ8 489 aaPredicted RBP14.68□□□□□ -0.06
TRAF4-212ENST00000498540 AP4E1Q9UPM8 1137 aa14.68□□□□□ -0.06
TRAF4-212ENST00000498540 PLEKHM1Q9Y4G2 1056 aa14.68□□□□□ -0.06
TRAF4-212ENST00000498540 USP9YO00507 2555 aaPredicted RBP14.68□□□□□ -0.06
TRAF4-212ENST00000498540 TEX15Q9BXT5 2789 aa14.68□□□□□ -0.06
TRAF4-212ENST00000498540 UTP20O75691 2785 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms