RNA–Protein interactions for RNA: ENST00000498535.1

MKRN1-216, Transcript of makorin ring finger protein 1, humanhuman

TSL 2

Gene MKRN1, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1-216ENST00000498535 BBS5Q8N3I7 341 aa25.38■■□□□ 1.65
MKRN1-216ENST00000498535 CCL4L1Q8NHW4 92 aa25.38■■□□□ 1.65
MKRN1-216ENST00000498535 ZNF653Q96CK0 615 aa25.38■■□□□ 1.65
MKRN1-216ENST00000498535 COQ10AQ96MF6 247 aa25.38■■□□□ 1.65
MKRN1-216ENST00000498535 TRIM7Q9C029 511 aa25.38■■□□□ 1.65
MKRN1-216ENST00000498535 NAT10Q9H0A0 1025 aaKnown RBP25.38■■□□□ 1.65
MKRN1-216ENST00000498535 SUDS3Q9H7L9 328 aaPredicted RBP25.38■■□□□ 1.65
MKRN1-216ENST00000498535 CARS2Q9HA77 564 aaKnown RBP25.38■■□□□ 1.65
MKRN1-216ENST00000498535 AKAP7Q9P0M2 348 aaPredicted RBP25.38■■□□□ 1.65
MKRN1-216ENST00000498535 PCDHGC4Q9Y5F7 938 aa25.38■■□□□ 1.65
MKRN1-216ENST00000498535 ARHGEF17Q96PE2 2063 aaPredicted RBP25.37■■□□□ 1.65
MKRN1-216ENST00000498535 TTC24A2A3L6 582 aaPredicted RBP25.37■■□□□ 1.65
MKRN1-216ENST00000498535 ZW10O43264 779 aa25.37■■□□□ 1.65
MKRN1-216ENST00000498535 SOCS5O75159 536 aa25.37■■□□□ 1.65
MKRN1-216ENST00000498535 LRCH4O75427 683 aa25.37■■□□□ 1.65
MKRN1-216ENST00000498535 VIPR1P32241 457 aa25.37■■□□□ 1.65
MKRN1-216ENST00000498535 ILF3Q12906 894 aaKnown RBP eCLIP25.37■■□□□ 1.655e-6■□□□□ 8.5
MKRN1-216ENST00000498535 TGIF1Q15583 401 aa25.37■■□□□ 1.65
MKRN1-216ENST00000498535 MAP9Q49MG5 647 aa25.37■■□□□ 1.65
MKRN1-216ENST00000498535 SFTPA2Q8IWL1 248 aa25.37■■□□□ 1.65
MKRN1-216ENST00000498535 PELI3Q8N2H9 469 aa25.37■■□□□ 1.65
MKRN1-216ENST00000498535 SPOCK2Q92563 424 aa25.37■■□□□ 1.65
MKRN1-216ENST00000498535 TRIM11Q96F44 468 aa25.37■■□□□ 1.65
MKRN1-216ENST00000498535 NSMCE3Q96MG7 304 aa25.37■■□□□ 1.65
MKRN1-216ENST00000498535 GSDMCQ9BYG8 508 aa25.37■■□□□ 1.65
MKRN1-216ENST00000498535 MRPL47Q9HD33 250 aaKnown RBP25.37■■□□□ 1.65
MKRN1-216ENST00000498535 EFSO43281 561 aa25.36■■□□□ 1.65
MKRN1-216ENST00000498535 HTRA2O43464 458 aaPredicted RBP25.36■■□□□ 1.65
MKRN1-216ENST00000498535 CPP00450 1065 aa25.36■■□□□ 1.65
MKRN1-216ENST00000498535 CYP2A6P11509 494 aaPredicted RBP25.36■■□□□ 1.65
MKRN1-216ENST00000498535 CCNB1P14635 433 aa25.36■■□□□ 1.65
MKRN1-216ENST00000498535 ITIH1P19827 911 aa25.36■■□□□ 1.65
MKRN1-216ENST00000498535 BIRC2Q13490 618 aa25.36■■□□□ 1.65
MKRN1-216ENST00000498535 CNGA3Q16281 694 aa25.36■■□□□ 1.65
MKRN1-216ENST00000498535 FILIP1LQ4L180 1135 aa25.36■■□□□ 1.65
MKRN1-216ENST00000498535 TMCO3Q6UWJ1 677 aa25.36■■□□□ 1.65
MKRN1-216ENST00000498535 ZNF571Q7Z3V5 609 aaPredicted RBP25.36■■□□□ 1.65
MKRN1-216ENST00000498535 PIM3Q86V86 326 aa25.36■■□□□ 1.65
MKRN1-216ENST00000498535 TP53INP2Q8IXH6 220 aa25.36■■□□□ 1.65
MKRN1-216ENST00000498535 GPBAR1Q8TDU6 330 aa25.36■■□□□ 1.65
MKRN1-216ENST00000498535 NSMCE1Q8WV22 266 aa25.36■■□□□ 1.65
MKRN1-216ENST00000498535 SGF29Q96ES7 293 aa25.36■■□□□ 1.65
MKRN1-216ENST00000498535 NUDCD1Q96RS6 583 aa25.36■■□□□ 1.65
MKRN1-216ENST00000498535 RTN4Q9NQC3 1192 aaKnown RBP25.36■■□□□ 1.65
MKRN1-216ENST00000498535 MYO1AQ9UBC5 1043 aa25.36■■□□□ 1.65
MKRN1-216ENST00000498535 PCDHB11Q9Y5F2 797 aa25.36■■□□□ 1.65
MKRN1-216ENST00000498535 GOLGA6CA6NDK9 693 aa25.35■■□□□ 1.65
MKRN1-216ENST00000498535 GOLGA6BA6NDN3 693 aa25.35■■□□□ 1.65
MKRN1-216ENST00000498535 RHPN2P1A8MT19 583 aa25.35■■□□□ 1.65
MKRN1-216ENST00000498535 HEXIM1O94992 359 aaKnown RBP25.35■■□□□ 1.65
MKRN1-216ENST00000498535 GOLGA6DP0CG33 693 aa25.35■■□□□ 1.65
MKRN1-216ENST00000498535 PCK1P35558 622 aa25.35■■□□□ 1.65
MKRN1-216ENST00000498535 ANP32AP39687 249 aaKnown RBP25.35■■□□□ 1.65
MKRN1-216ENST00000498535 MAPK10P53779 464 aa25.35■■□□□ 1.65
MKRN1-216ENST00000498535 KLHL30Q0D2K2 578 aa25.35■■□□□ 1.65
MKRN1-216ENST00000498535 BOLA3Q53S33 107 aa25.35■■□□□ 1.65
MKRN1-216ENST00000498535 CCDC183Q5T5S1 534 aa25.35■■□□□ 1.65
MKRN1-216ENST00000498535 HEATR4Q86WZ0 1026 aa25.35■■□□□ 1.65
MKRN1-216ENST00000498535 ZDHHC1Q8WTX9 485 aa25.35■■□□□ 1.65
MKRN1-216ENST00000498535 TEX101Q9BY14 249 aa25.35■■□□□ 1.65
MKRN1-216ENST00000498535 SPATS2LQ9NUQ6 558 aaKnown RBP25.35■■□□□ 1.65
MKRN1-216ENST00000498535 GOLGA6AQ9NYA3 693 aa25.35■■□□□ 1.65
MKRN1-216ENST00000498535 AIPL1Q9NZN9 384 aa25.35■■□□□ 1.65
MKRN1-216ENST00000498535 PHTF1Q9UMS5 762 aa25.35■■□□□ 1.65
MKRN1-216ENST00000498535 PRAMEF33A0A0G2JMD5 474 aa25.34■■□□□ 1.65
MKRN1-216ENST00000498535 PRAMEF10O60809 474 aa25.34■■□□□ 1.65
MKRN1-216ENST00000498535 CPNE6O95741 557 aa25.34■■□□□ 1.65
MKRN1-216ENST00000498535 MYBL1P10243 752 aa25.34■■□□□ 1.65
MKRN1-216ENST00000498535 ALDH4A1P30038 563 aa25.34■■□□□ 1.65
MKRN1-216ENST00000498535 B4GALNT1Q00973 533 aa25.34■■□□□ 1.65
MKRN1-216ENST00000498535 PEX6Q13608 980 aa25.34■■□□□ 1.65
MKRN1-216ENST00000498535 DPYSL2Q16555 572 aa25.34■■□□□ 1.65
MKRN1-216ENST00000498535 AMZ1Q400G9 498 aa25.34■■□□□ 1.65
MKRN1-216ENST00000498535 MANEAQ5SRI9 462 aa25.34■■□□□ 1.65
MKRN1-216ENST00000498535 SLITRK4Q8IW52 837 aa25.34■■□□□ 1.65
MKRN1-216ENST00000498535 USP7Q93009 1102 aa25.34■■□□□ 1.65
MKRN1-216ENST00000498535 ARHGAP9Q9BRR9 750 aa25.34■■□□□ 1.65
MKRN1-216ENST00000498535 NOD2Q9HC29 1040 aa25.34■■□□□ 1.65
MKRN1-216ENST00000498535 TRNAU1APQ9NX07 287 aaKnown RBP25.34■■□□□ 1.65
MKRN1-216ENST00000498535 SCN8AQ9UQD0 1980 aa25.34■■□□□ 1.65
MKRN1-216ENST00000498535 DDX3XO00571 662 aaKnown RBP eCLIP25.33■■□□□ 1.653e-11■■■■□ 19.6
MKRN1-216ENST00000498535 CEACAM5P06731 702 aa25.33■■□□□ 1.65
MKRN1-216ENST00000498535 CR2P20023 1033 aa25.33■■□□□ 1.65
MKRN1-216ENST00000498535 AMPD1P23109 780 aa25.33■■□□□ 1.65
MKRN1-216ENST00000498535 ETV3P41162 512 aa25.33■■□□□ 1.65
MKRN1-216ENST00000498535 PRKCIP41743 596 aa25.33■■□□□ 1.65
MKRN1-216ENST00000498535 GNPDA1P46926 289 aa25.33■■□□□ 1.65
MKRN1-216ENST00000498535 MAZP56270 477 aaKnown RBP25.33■■□□□ 1.65
MKRN1-216ENST00000498535 TYRO3Q06418 890 aa25.33■■□□□ 1.65
MKRN1-216ENST00000498535 SMTNL2Q2TAL5 461 aa25.33■■□□□ 1.65
MKRN1-216ENST00000498535 TMEM164Q5U3C3 297 aa25.33■■□□□ 1.65
MKRN1-216ENST00000498535 XKR5Q6UX68 686 aa25.33■■□□□ 1.65
MKRN1-216ENST00000498535 ATPAF2Q8N5M1 289 aa25.33■■□□□ 1.65
MKRN1-216ENST00000498535 ZSCAN1Q8NBB4 408 aa25.33■■□□□ 1.65
MKRN1-216ENST00000498535 HSPH1Q92598 858 aa25.33■■□□□ 1.65
MKRN1-216ENST00000498535 DTD2Q96FN9 168 aa25.33■■□□□ 1.65
MKRN1-216ENST00000498535 SEMA6CQ9H3T2 930 aa25.33■■□□□ 1.65
MKRN1-216ENST00000498535 RDH14Q9HBH5 336 aa25.33■■□□□ 1.65
MKRN1-216ENST00000498535 TAAR2Q9P1P5 351 aa25.33■■□□□ 1.65
MKRN1-216ENST00000498535 SPTA1P02549 2419 aa25.33■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms