RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 CEACAM5P06731 702 aa16.08■□□□□ 0.16
MUC1-220ENST00000498431 LIFP15018 202 aa16.08■□□□□ 0.16
MUC1-220ENST00000498431 STAT1P42224 750 aa16.08■□□□□ 0.16
MUC1-220ENST00000498431 NDST2P52849 883 aa16.08■□□□□ 0.16
MUC1-220ENST00000498431 OGDHQ02218 1023 aa16.08■□□□□ 0.16
MUC1-220ENST00000498431 BCL2L1Q07817 233 aa16.08■□□□□ 0.16
MUC1-220ENST00000498431 NR1D2Q14995 579 aa16.08■□□□□ 0.16
MUC1-220ENST00000498431 ACOX1Q15067 660 aa16.08■□□□□ 0.16
MUC1-220ENST00000498431 CA9Q16790 459 aa16.08■□□□□ 0.16
MUC1-220ENST00000498431 SKIDA1Q1XH10 827 aa16.08■□□□□ 0.16
MUC1-220ENST00000498431 TMEM164Q5U3C3 297 aa16.08■□□□□ 0.16
MUC1-220ENST00000498431 NKAIN2Q5VXU1 208 aa16.08■□□□□ 0.16
MUC1-220ENST00000498431 COQ10AQ96MF6 247 aa16.08■□□□□ 0.16
MUC1-220ENST00000498431 TAAR9Q96RI9 348 aa16.08■□□□□ 0.16
MUC1-220ENST00000498431 EPN3Q9H201 632 aa16.08■□□□□ 0.16
MUC1-220ENST00000498431 VPS16Q9H269 839 aa16.08■□□□□ 0.16
MUC1-220ENST00000498431 TAAR2Q9P1P5 351 aa16.08■□□□□ 0.16
MUC1-220ENST00000498431 B4GALT6Q9UBX8 382 aa16.08■□□□□ 0.16
MUC1-220ENST00000498431 B3GALT1Q9Y5Z6 326 aa16.08■□□□□ 0.16
MUC1-220ENST00000498431 TEX15Q9BXT5 2789 aa16.08■□□□□ 0.16
MUC1-220ENST00000498431 NBASA2RRP1 2371 aa16.07■□□□□ 0.16
MUC1-220ENST00000498431 HGSO14964 777 aaPredicted RBP16.07■□□□□ 0.16
MUC1-220ENST00000498431 MYCLP1P12525 358 aaPredicted RBP16.07■□□□□ 0.16
MUC1-220ENST00000498431 MPSTP25325 297 aa16.07■□□□□ 0.16
MUC1-220ENST00000498431 CSF2RBP32927 897 aa16.07■□□□□ 0.16
MUC1-220ENST00000498431 UGT1A3P35503 534 aa16.07■□□□□ 0.16
MUC1-220ENST00000498431 PPP1R15BQ5SWA1 713 aa16.07■□□□□ 0.16
MUC1-220ENST00000498431 DNAJC24Q6P3W2 148 aa16.07■□□□□ 0.16
MUC1-220ENST00000498431 BORAQ6PGQ7 559 aa16.07■□□□□ 0.16
MUC1-220ENST00000498431 SLC30A9Q6PML9 568 aa16.07■□□□□ 0.16
MUC1-220ENST00000498431 HEATR4Q86WZ0 1026 aa16.07■□□□□ 0.16
MUC1-220ENST00000498431 ARHGAP12Q8IWW6 846 aa16.07■□□□□ 0.16
MUC1-220ENST00000498431 TP53INP2Q8IXH6 220 aa16.07■□□□□ 0.16
MUC1-220ENST00000498431 ZNF564Q8TBZ8 553 aaPredicted RBP16.07■□□□□ 0.16
MUC1-220ENST00000498431 ART4Q93070 314 aa16.07■□□□□ 0.16
MUC1-220ENST00000498431 CNPY3Q9BT09 278 aa16.07■□□□□ 0.16
MUC1-220ENST00000498431 FRMD8Q9BZ67 464 aaPredicted RBP16.07■□□□□ 0.16
MUC1-220ENST00000498431 CLSTN2Q9H4D0 955 aa16.07■□□□□ 0.16
MUC1-220ENST00000498431 AKAP7Q9P0M2 348 aaPredicted RBP16.07■□□□□ 0.16
MUC1-220ENST00000498431 TMEM9Q9P0T7 183 aa16.07■□□□□ 0.16
MUC1-220ENST00000498431 PCDHGA3Q9Y5H0 932 aa16.07■□□□□ 0.16
MUC1-220ENST00000498431 ARHGAP42A6NI28 874 aa16.06■□□□□ 0.16
MUC1-220ENST00000498431 PPM1DO15297 605 aa16.06■□□□□ 0.16
MUC1-220ENST00000498431 EEF1GP26641 437 aaKnown RBP16.06■□□□□ 0.16
MUC1-220ENST00000498431 GNPDA1P46926 289 aa16.06■□□□□ 0.16
MUC1-220ENST00000498431 POLD2P49005 469 aa16.06■□□□□ 0.16
MUC1-220ENST00000498431 ATP1A2P50993 1020 aa16.06■□□□□ 0.16
MUC1-220ENST00000498431 SCNN1BP51168 640 aa16.06■□□□□ 0.16
MUC1-220ENST00000498431 LIMK2P53671 638 aa16.06■□□□□ 0.16
MUC1-220ENST00000498431 AIF1P55008 147 aa16.06■□□□□ 0.16
MUC1-220ENST00000498431 POLE2P56282 527 aa16.06■□□□□ 0.16
MUC1-220ENST00000498431 ILF3Q12906 894 aaKnown RBP eCLIP16.06■□□□□ 0.16
MUC1-220ENST00000498431 KCNAB2Q13303 367 aa16.06■□□□□ 0.16
MUC1-220ENST00000498431 CNGA3Q16281 694 aa16.06■□□□□ 0.16
MUC1-220ENST00000498431 TSR1Q2NL82 804 aaKnown RBP16.06■□□□□ 0.16
MUC1-220ENST00000498431 NAGSQ8N159 534 aa16.06■□□□□ 0.16
MUC1-220ENST00000498431 IL22RA1Q8N6P7 574 aa16.06■□□□□ 0.16
MUC1-220ENST00000498431 NPWQ8N729 165 aa16.06■□□□□ 0.16
MUC1-220ENST00000498431 PAF1Q8N7H5 531 aa16.06■□□□□ 0.16
MUC1-220ENST00000498431 NUS1Q96E22 293 aa16.06■□□□□ 0.16
MUC1-220ENST00000498431 CINPQ9BW66 212 aaPredicted RBP16.06■□□□□ 0.16
MUC1-220ENST00000498431 GSDMCQ9BYG8 508 aa16.06■□□□□ 0.16
MUC1-220ENST00000498431 ADNPQ9H2P0 1102 aa16.06■□□□□ 0.16
MUC1-220ENST00000498431 ANKMY1Q9P2S6 941 aa16.06■□□□□ 0.16
MUC1-220ENST00000498431 SUFUQ9UMX1 484 aa16.06■□□□□ 0.16
MUC1-220ENST00000498431 AP4E1Q9UPM8 1137 aa16.06■□□□□ 0.16
MUC1-220ENST00000498431 SIK3Q9Y2K2 1263 aa16.06■□□□□ 0.16
MUC1-220ENST00000498431 PLEKHM1Q9Y4G2 1056 aa16.06■□□□□ 0.16
MUC1-220ENST00000498431 IGHV1OR21-1A0A087WYE8 117 aa16.05■□□□□ 0.16
MUC1-220ENST00000498431 DFFAO00273 331 aa16.05■□□□□ 0.16
MUC1-220ENST00000498431 EEF2KO00418 725 aaKnown RBP16.05■□□□□ 0.16
MUC1-220ENST00000498431 CTBSQ01459 385 aa16.05■□□□□ 0.16
MUC1-220ENST00000498431 PTPRRQ15256 657 aa16.05■□□□□ 0.16
MUC1-220ENST00000498431 KRT31Q15323 416 aa16.05■□□□□ 0.16
MUC1-220ENST00000498431 IGFBP7Q16270 282 aa16.05■□□□□ 0.16
MUC1-220ENST00000498431 DENND2CQ68D51 928 aa16.05■□□□□ 0.16
MUC1-220ENST00000498431 PEBP4Q96S96 227 aa16.05■□□□□ 0.16
MUC1-220ENST00000498431 KCTD15Q96SI1 283 aaPredicted RBP16.05■□□□□ 0.16
MUC1-220ENST00000498431 TEX101Q9BY14 249 aa16.05■□□□□ 0.16
MUC1-220ENST00000498431 PHPT1Q9NRX4 125 aaPredicted RBP16.05■□□□□ 0.16
MUC1-220ENST00000498431 SEPT11Q9NVA2 429 aaKnown RBP16.05■□□□□ 0.16
MUC1-220ENST00000498431 TRNAU1APQ9NX07 287 aaKnown RBP16.05■□□□□ 0.16
MUC1-220ENST00000498431 OCIAD1Q9NX40 245 aa16.05■□□□□ 0.16
MUC1-220ENST00000498431 NBPF19A0A087WUL8 3843 aa16.04■□□□□ 0.16
MUC1-220ENST00000498431 PDE2AO00408 941 aaPredicted RBP16.04■□□□□ 0.16
MUC1-220ENST00000498431 THRAP10827 490 aa16.04■□□□□ 0.16
MUC1-220ENST00000498431 HTR7P34969 479 aa16.04■□□□□ 0.16
MUC1-220ENST00000498431 ETV3P41162 512 aa16.04■□□□□ 0.16
MUC1-220ENST00000498431 GPR3P46089 330 aa16.04■□□□□ 0.16
MUC1-220ENST00000498431 POLR2LP62875 67 aaKnown RBP16.04■□□□□ 0.16
MUC1-220ENST00000498431 CDK3Q00526 305 aa16.04■□□□□ 0.16
MUC1-220ENST00000498431 NSUN2Q08J23 767 aaKnown RBP eCLIP16.04■□□□□ 0.16
MUC1-220ENST00000498431 CLPPQ16740 277 aaPredicted RBP16.04■□□□□ 0.16
MUC1-220ENST00000498431 HSD11B1LQ7Z5J1 315 aa16.04■□□□□ 0.16
MUC1-220ENST00000498431 LURAP1LQ8IV03 231 aa16.04■□□□□ 0.16
MUC1-220ENST00000498431 CACNA2D3Q8IZS8 1091 aa16.04■□□□□ 0.16
MUC1-220ENST00000498431 ARFGAP1Q8N6T3 406 aa16.04■□□□□ 0.16
MUC1-220ENST00000498431 AGBL5Q8NDL9 886 aa16.04■□□□□ 0.16
MUC1-220ENST00000498431 OR4D9Q8NGE8 314 aa16.04■□□□□ 0.16
MUC1-220ENST00000498431 CDH19Q9H159 772 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms