RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 PQLC3Q8N755 202 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 FBXO25Q8TCJ0 367 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 TFB1MQ8WVM0 346 aaKnown RBP5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 POF1BQ8WVV4 589 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 UBLCP1Q8WVY7 318 aaPredicted RBP5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 C1orf74Q96LT6 269 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 GDAP1L1Q96MZ0 367 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 TMEM121Q9BTD3 319 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 TTLL2Q9BWV7 592 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 FRMD8Q9BZ67 464 aaPredicted RBP5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 NEUROG2Q9H2A3 272 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 CATSPERBQ9H7T0 1116 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 TLE6Q9H808 572 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 NMUR1Q9HB89 426 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 CYP4F11Q9HBI6 524 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 MED4Q9NPJ6 270 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 ARHGEF38Q9NXL2 777 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 PSD3Q9NYI0 1048 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 GRHL1Q9NZI5 618 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 TRPM5Q9NZQ8 1165 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 PAK5Q9P286 719 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 SAE1Q9UBE0 346 aaPredicted RBP5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 OR12D3Q9UGF7 316 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 SFMBT1Q9UHJ3 866 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 FAM153AQ9UHL3 310 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 HPCAL4Q9UM19 191 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 MAGED2Q9UNF1 606 aaPredicted RBP5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 NEU2Q9Y3R4 380 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 ASB3Q9Y575 518 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 NBEAQ8NFP9 2946 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 HELZ2Q9BYK8 2649 aaKnown RBP5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 CEP295Q9C0D2 2601 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 C5orf60A6NFR6 353 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 GOLGA6L10A6NI86 522 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 KCNU1A8MYU2 1149 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 GOLGA8KD6RF30 607 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 EIF3HO15372 352 aaKnown RBP eCLIP5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 KCNN4O15554 427 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 MTSS1O43312 755 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 NARSO43776 548 aaKnown RBP5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 PPFIA2O75334 1257 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 GCATO75600 419 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 VNN2O95498 520 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 CXCL14O95715 111 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 ZDHHC11BP0C7U3 371 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 SRGAP2BP0DMP2 458 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 CTSAP10619 480 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 GLULP15104 373 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 TCF3P15923 654 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 ERCC2P18074 760 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 RBL1P28749 1068 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 EPHB2P29323 1055 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 CA8P35219 290 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 RPL22P35268 128 aaKnown RBP5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 ATP5C1P36542 298 aaKnown RBP5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 HSD17B3P37058 310 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 MLLT6P55198 1093 aaPredicted RBP5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 SARNPP82979 210 aaKnown RBP5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 UBE3AQ05086 875 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 ZNF33AQ06730 810 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 IFFO1Q0D2I5 559 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 SEMA3BQ13214 749 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 DUSP6Q16828 381 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 PABPC1LQ4VXU2 614 aaKnown RBP5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 ANKRD39Q53RE8 183 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 C10orf120Q5SQS8 335 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 HECTD3Q5T447 861 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 SNX30Q5VWJ9 437 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 NUGGCQ68CJ6 796 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 NCBP2-AS2Q69YL0 99 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 HIBCHQ6NVY1 386 aaPredicted RBP5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 RHBDF2Q6PJF5 856 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 ZDHHC24Q6UX98 284 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 CCDC149Q6ZUS6 474 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 ITIH5Q86UX2 942 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 HOOK3Q86VS8 718 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 CCDC25Q86WR0 208 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 CIR1Q86X95 450 aaPredicted RBP5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 UNC45BQ8IWX7 931 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 TCEAL8Q8IYN2 117 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 IQCKQ8N0W5 287 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 PYROXD2Q8N2H3 581 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 ELMOD1Q8N336 334 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 FAM71DQ8N9W8 422 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 CCNYQ8ND76 341 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 HTR3CQ8WXA8 447 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 CASP10Q92851 521 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 PPP2R3CQ969Q6 453 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 TBC1D31Q96DN5 1066 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 RTP4Q96DX8 246 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 TRMT2BQ96GJ1 504 aaKnown RBP5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 SLC39A13Q96H72 371 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 BTN2A3PQ96KV6 586 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 ZNF512Q96ME7 567 aaPredicted RBP5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 SYT3Q9BQG1 590 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 CCDC77Q9BR77 488 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 VN1R3Q9BXE9 311 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 MAGEB5Q9BZ81 275 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 NACA2Q9H009 215 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms