RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 KCND2Q9NZV8 630 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 MPP6Q9NZW5 540 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 CTNNAL1Q9UBT7 734 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 HSPB7Q9UBY9 170 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 TNNQ9UQP3 1299 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 NFE2L3Q9Y4A8 694 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.95□□□□□ -1.94
RIF1-212ENST00000498041 IQGAP1P46940 1657 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 ARAP3Q8WWN8 1544 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 SETD1AO15047 1707 aaKnown RBP2.94□□□□□ -1.94
RIF1-212ENST00000498041 A0A1B0GVC2 190 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 WNT9BO14905 357 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 HSPA12AO43301 675 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 KLK8O60259 260 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 MT-CYBP00156 380 aaPredicted RBP2.94□□□□□ -1.94
RIF1-212ENST00000498041 FGF3P11487 239 aaPredicted RBP2.94□□□□□ -1.94
RIF1-212ENST00000498041 ETFAP13804 333 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 ITGAXP20702 1163 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 EDN2P20800 178 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 GPTP24298 496 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 ITGB8P26012 769 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 PIGAP37287 484 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 GABRB2P47870 512 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 ART1P52961 327 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 BNC1Q01954 994 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 KIF5AQ12840 1032 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 NEDD9Q14511 834 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 NFATC4Q14934 902 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 PPP2R5BQ15173 497 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 PRICKLE4Q2TBC4 344 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 SLC9B1Q4ZJI4 515 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 FAM69AQ5T7M9 428 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 TXNDC8Q6A555 127 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 CAPRIN2Q6IMN6 1127 aaKnown RBP2.94□□□□□ -1.94
RIF1-212ENST00000498041 LRRC8EQ6NSJ5 796 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 CREB3L2Q70SY1 520 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 RBM23Q86U06 439 aaKnown RBP2.94□□□□□ -1.94
RIF1-212ENST00000498041 HEATR4Q86WZ0 1026 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 ZCCHC9Q8N567 271 aaKnown RBP2.94□□□□□ -1.94
RIF1-212ENST00000498041 TSPYL6Q8N831 410 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 FBXL8Q96CD0 374 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 KLHL29Q96CT2 875 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 RTP4Q96DX8 246 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 KLHL15Q96M94 604 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 ZNF570Q96NI8 536 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 BBS4Q96RK4 519 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 FIZ1Q96SL8 496 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 H2AFJQ9BTM1 129 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 PAIP1Q9H074 479 aaKnown RBP2.94□□□□□ -1.94
RIF1-212ENST00000498041 C6orf106Q9H6K1 298 aaPredicted RBP2.94□□□□□ -1.94
RIF1-212ENST00000498041 OCIAD1Q9NX40 245 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 CISD1Q9NZ45 108 aaKnown RBP2.94□□□□□ -1.94
RIF1-212ENST00000498041 ARHGAP26Q9UNA1 814 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 FAM96BQ9Y3D0 163 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 ROCK2O75116 1388 aaKnown RBP2.94□□□□□ -1.94
RIF1-212ENST00000498041 ERVK-7P63135 1459 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 NEO1Q92859 1461 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 MYOM1P52179 1685 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 STRCP1A6NGW2 1772 aa2.94□□□□□ -1.94
RIF1-212ENST00000498041 CCDC144AA2RUR9 1427 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 EFCAB6Q5THR3 1501 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 ZC3H13Q5T200 1668 aaKnown RBP2.93□□□□□ -1.94
RIF1-212ENST00000498041 ADGRB1O14514 1584 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 RALGAPBQ86X10 1494 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 EME2A4GXA9 379 aaPredicted RBP2.93□□□□□ -1.94
RIF1-212ENST00000498041 A6NLC8 198 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 TTC36A6NLP5 189 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 BTBD18B2RXH4 712 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 TAF4O00268 1085 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 CREB3O43889 395 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 F9P00740 461 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 TFP02787 698 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 MMP2P08253 660 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 AGAP20933 346 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 ABCD3P28288 659 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 ABCD1P33897 745 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 PDLIM4P50479 330 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 PEX5P50542 639 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 EFNA5P52803 228 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 TUBA1BP68363 451 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 PTP4A2Q12974 167 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 GRIK3Q13003 919 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 RNPS1Q15287 305 aaKnown RBP2.93□□□□□ -1.94
RIF1-212ENST00000498041 TCTN1Q2MV58 587 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 ALFQ53S48 1182 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 XKR9Q5GH70 373 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 ZC3HC1Q86WB0 502 aaKnown RBP2.93□□□□□ -1.94
RIF1-212ENST00000498041 ARMC8Q8IUR7 673 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 DHX40Q8IX18 779 aaKnown RBP2.93□□□□□ -1.94
RIF1-212ENST00000498041 SCCPDHQ8NBX0 429 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 IL17REQ8NFR9 667 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 NFKBIDQ8NI38 313 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 ERGIC1Q969X5 290 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 SAAL1Q96ER3 474 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 FAM84BQ96KN1 310 aaPredicted RBP2.93□□□□□ -1.94
RIF1-212ENST00000498041 PRAM1Q96QH2 718 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 CTAGE1Q96RT6 745 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 EIF2AK1Q9BQI3 630 aaKnown RBP2.93□□□□□ -1.94
RIF1-212ENST00000498041 CDK19Q9BWU1 502 aa2.93□□□□□ -1.94
RIF1-212ENST00000498041 PRKRIP1Q9H875 184 aaPredicted RBP2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms