RNA–Protein interactions for RNA: ENST00000497565.1

BRPF1-208, Transcript of bromodomain and PHD finger containing 1, humanhuman

TSL 3

Gene BRPF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1-208ENST00000497565 LRRC38Q5VT99 294 aa13.02□□□□□ -0.33
BRPF1-208ENST00000497565 NCBP2-AS2Q69YL0 99 aa13.02□□□□□ -0.33
BRPF1-208ENST00000497565 OGFOD3Q6PK18 319 aa13.02□□□□□ -0.33
BRPF1-208ENST00000497565 C19orf48Q6RUI8 117 aa13.02□□□□□ -0.33
BRPF1-208ENST00000497565 CNGA4Q8IV77 575 aa13.02□□□□□ -0.33
BRPF1-208ENST00000497565 VSTM4Q8IW00 320 aa13.02□□□□□ -0.33
BRPF1-208ENST00000497565 PLA2G15Q8NCC3 412 aa13.02□□□□□ -0.33
BRPF1-208ENST00000497565 ZNF248Q8NDW4 579 aa13.02□□□□□ -0.33
BRPF1-208ENST00000497565 KIAA1524Q8TCG1 905 aa13.02□□□□□ -0.33
BRPF1-208ENST00000497565 HDAC11Q96DB2 347 aa13.02□□□□□ -0.33
BRPF1-208ENST00000497565 CCDC97Q96F63 343 aaPredicted RBP13.02□□□□□ -0.33
BRPF1-208ENST00000497565 DTD2Q96FN9 168 aa13.02□□□□□ -0.33
BRPF1-208ENST00000497565 SEMA3CQ99985 751 aa13.02□□□□□ -0.33
BRPF1-208ENST00000497565 TEX101Q9BY14 249 aa13.02□□□□□ -0.33
BRPF1-208ENST00000497565 BRD8Q9H0E9 1235 aa13.02□□□□□ -0.33
BRPF1-208ENST00000497565 NT5MQ9NPB1 228 aa13.02□□□□□ -0.33
BRPF1-208ENST00000497565 THSD1Q9NS62 852 aa13.02□□□□□ -0.33
BRPF1-208ENST00000497565 ABHD10Q9NUJ1 306 aa13.02□□□□□ -0.33
BRPF1-208ENST00000497565 RBM22Q9NW64 420 aaKnown RBP eCLIP13.02□□□□□ -0.33
BRPF1-208ENST00000497565 TRNAU1APQ9NX07 287 aaKnown RBP13.02□□□□□ -0.33
BRPF1-208ENST00000497565 GULP1Q9UBP9 304 aa13.02□□□□□ -0.33
BRPF1-208ENST00000497565 PCDHGA8Q9Y5G5 932 aa13.02□□□□□ -0.33
BRPF1-208ENST00000497565 RAI2Q9Y5P3 530 aa13.02□□□□□ -0.33
BRPF1-208ENST00000497565 LAMA5O15230 3695 aa13.01□□□□□ -0.33
BRPF1-208ENST00000497565 NTN3O00634 580 aaPredicted RBP13.01□□□□□ -0.33
BRPF1-208ENST00000497565 FZD6O60353 706 aa13.01□□□□□ -0.33
BRPF1-208ENST00000497565 MTA2O94776 668 aa13.01□□□□□ -0.33
BRPF1-208ENST00000497565 CD48P09326 243 aa13.01□□□□□ -0.33
BRPF1-208ENST00000497565 MYF5P13349 255 aa13.01□□□□□ -0.33
BRPF1-208ENST00000497565 CCNB1P14635 433 aa13.01□□□□□ -0.33
BRPF1-208ENST00000497565 GLB1P16278 677 aa13.01□□□□□ -0.33
BRPF1-208ENST00000497565 GM2AP17900 193 aa13.01□□□□□ -0.33
BRPF1-208ENST00000497565 TGM2P21980 687 aa13.01□□□□□ -0.33
BRPF1-208ENST00000497565 KDELR1P24390 212 aa13.01□□□□□ -0.33
BRPF1-208ENST00000497565 RBMS1P29558 406 aaKnown RBP13.01□□□□□ -0.33
BRPF1-208ENST00000497565 EPHB1P54762 984 aa13.01□□□□□ -0.33
BRPF1-208ENST00000497565 PCBP4P57723 403 aaKnown RBP13.01□□□□□ -0.33
BRPF1-208ENST00000497565 MAXP61244 160 aa13.01□□□□□ -0.33
BRPF1-208ENST00000497565 GABREP78334 506 aa13.01□□□□□ -0.33
BRPF1-208ENST00000497565 TCEAL1Q15170 157 aa13.01□□□□□ -0.33
BRPF1-208ENST00000497565 CNGA3Q16281 694 aa13.01□□□□□ -0.33
BRPF1-208ENST00000497565 ZNF765Q7L2R6 523 aa13.01□□□□□ -0.33
BRPF1-208ENST00000497565 TAF8Q7Z7C8 310 aa13.01□□□□□ -0.33
BRPF1-208ENST00000497565 NRSN1Q8IZ57 195 aa13.01□□□□□ -0.33
BRPF1-208ENST00000497565 GPR156Q8NFN8 814 aa13.01□□□□□ -0.33
BRPF1-208ENST00000497565 WDR36Q8NI36 951 aaKnown RBP13.01□□□□□ -0.33
BRPF1-208ENST00000497565 SLC35G2Q8TBE7 412 aa13.01□□□□□ -0.33
BRPF1-208ENST00000497565 PIH1D2Q8WWB5 315 aa13.01□□□□□ -0.33
BRPF1-208ENST00000497565 OR1E3Q8WZA6 343 aa13.01□□□□□ -0.33
BRPF1-208ENST00000497565 NSMCE3Q96MG7 304 aa13.01□□□□□ -0.33
BRPF1-208ENST00000497565 DCBLD2Q96PD2 775 aa13.01□□□□□ -0.33
BRPF1-208ENST00000497565 RNF157Q96PX1 679 aa13.01□□□□□ -0.33
BRPF1-208ENST00000497565 CCDC3Q9BQI4 270 aa13.01□□□□□ -0.33
BRPF1-208ENST00000497565 MAK16Q9BXY0 300 aaKnown RBP13.01□□□□□ -0.33
BRPF1-208ENST00000497565 GSDMCQ9BYG8 508 aa13.01□□□□□ -0.33
BRPF1-208ENST00000497565 APPL1Q9UKG1 709 aa13.01□□□□□ -0.33
BRPF1-208ENST00000497565 ATRXP46100 2492 aa13.01□□□□□ -0.33
BRPF1-208ENST00000497565 ZFHX4Q86UP3 3567 aa13.01□□□□□ -0.33
BRPF1-208ENST00000497565 PTPRQQ9UMZ3 2332 aa13□□□□□ -0.33
BRPF1-208ENST00000497565 UNC13CQ8NB66 2214 aa13□□□□□ -0.33
BRPF1-208ENST00000497565 SHROOM3Q8TF72 1996 aa13□□□□□ -0.33
BRPF1-208ENST00000497565 A0A0J9YYE9 177 aa13□□□□□ -0.33
BRPF1-208ENST00000497565 PRSS38A1L453 326 aa13□□□□□ -0.33
BRPF1-208ENST00000497565 RGSL1A5PLK6 1076 aa13□□□□□ -0.33
BRPF1-208ENST00000497565 TMEM202A6NGA9 273 aa13□□□□□ -0.33
BRPF1-208ENST00000497565 A8MX80 341 aa13□□□□□ -0.33
BRPF1-208ENST00000497565 TLX3O43711 291 aaPredicted RBP13□□□□□ -0.33
BRPF1-208ENST00000497565 NUDT21O43809 227 aaKnown RBP13□□□□□ -0.33
BRPF1-208ENST00000497565 MFSD11O43934 449 aa13□□□□□ -0.33
BRPF1-208ENST00000497565 MFAP3LO75121 409 aa13□□□□□ -0.33
BRPF1-208ENST00000497565 TRBC1P01850 177 aa13□□□□□ -0.33
BRPF1-208ENST00000497565 UCNP55089 124 aa13□□□□□ -0.33
BRPF1-208ENST00000497565 ILF3Q12906 894 aaKnown RBP eCLIP13□□□□□ -0.33
BRPF1-208ENST00000497565 MESDQ14696 234 aa13□□□□□ -0.33
BRPF1-208ENST00000497565 CLPPQ16740 277 aaPredicted RBP13□□□□□ -0.33
BRPF1-208ENST00000497565 ATP13A4Q4VNC1 1196 aa13□□□□□ -0.33
BRPF1-208ENST00000497565 ODF2Q5BJF6 829 aa13□□□□□ -0.33
BRPF1-208ENST00000497565 BZW1Q7L1Q6 419 aaKnown RBP13□□□□□ -0.33
BRPF1-208ENST00000497565 TECPR1Q7Z6L1 1165 aa13□□□□□ -0.33
BRPF1-208ENST00000497565 CCDC13Q8IYE1 715 aa13□□□□□ -0.33
BRPF1-208ENST00000497565 ARL14Q8N4G2 192 aa13□□□□□ -0.33
BRPF1-208ENST00000497565 FAM46DQ8NEK8 389 aa13□□□□□ -0.33
BRPF1-208ENST00000497565 TRAF3IP1Q8TDR0 691 aaPredicted RBP13□□□□□ -0.33
BRPF1-208ENST00000497565 GPBAR1Q8TDU6 330 aa13□□□□□ -0.33
BRPF1-208ENST00000497565 TMEM159Q96B96 161 aa13□□□□□ -0.33
BRPF1-208ENST00000497565 PDXPQ96GD0 296 aa13□□□□□ -0.33
BRPF1-208ENST00000497565 TMEM74Q96NL1 305 aa13□□□□□ -0.33
BRPF1-208ENST00000497565 LYSMD1Q96S90 227 aa13□□□□□ -0.33
BRPF1-208ENST00000497565 DPH1Q9BZG8 443 aa13□□□□□ -0.33
BRPF1-208ENST00000497565 STRADBQ9C0K7 418 aa13□□□□□ -0.33
BRPF1-208ENST00000497565 NHEJ1Q9H9Q4 299 aaPredicted RBP13□□□□□ -0.33
BRPF1-208ENST00000497565 FGF22Q9HCT0 170 aa13□□□□□ -0.33
BRPF1-208ENST00000497565 DDX56Q9NY93 547 aaKnown RBP13□□□□□ -0.33
BRPF1-208ENST00000497565 PCDHB1Q9Y5F3 818 aa13□□□□□ -0.33
BRPF1-208ENST00000497565 ITPR1Q14643 2758 aa12.99□□□□□ -0.33
BRPF1-208ENST00000497565 CCDC187A0A096LP49 1063 aa12.99□□□□□ -0.33
BRPF1-208ENST00000497565 TTC24A2A3L6 582 aaPredicted RBP12.99□□□□□ -0.33
BRPF1-208ENST00000497565 NPIPB15A6NHN6 443 aaPredicted RBP12.99□□□□□ -0.33
BRPF1-208ENST00000497565 MPOP05164 745 aa12.99□□□□□ -0.33
BRPF1-208ENST00000497565 IVLP07476 585 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms