RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 HMGB1P1B2RPK0 211 aaPredicted RBP14.22□□□□□ -0.13
VPS26A-209ENST00000497564 POC1B-GALNT4F8VUJ3 575 aa14.22□□□□□ -0.13
VPS26A-209ENST00000497564 H3BQF6 201 aa14.22□□□□□ -0.13
VPS26A-209ENST00000497564 K7ESF4 209 aa14.22□□□□□ -0.13
VPS26A-209ENST00000497564 SIN3BO75182 1162 aa14.22□□□□□ -0.13
VPS26A-209ENST00000497564 CHRM1P11229 460 aaPredicted RBP14.22□□□□□ -0.13
VPS26A-209ENST00000497564 GKP32189 559 aa14.22□□□□□ -0.13
VPS26A-209ENST00000497564 MSH2P43246 934 aa14.22□□□□□ -0.13
VPS26A-209ENST00000497564 CXCL12P48061 93 aa14.22□□□□□ -0.13
VPS26A-209ENST00000497564 ARCN1P48444 511 aaKnown RBP14.22□□□□□ -0.13
VPS26A-209ENST00000497564 EPHB1P54762 984 aa14.22□□□□□ -0.13
VPS26A-209ENST00000497564 PDE1BQ01064 536 aa14.22□□□□□ -0.13
VPS26A-209ENST00000497564 SEPT6Q14141 434 aa14.22□□□□□ -0.13
VPS26A-209ENST00000497564 EFTUD2Q15029 972 aaKnown RBP eCLIP14.22□□□□□ -0.13
VPS26A-209ENST00000497564 ZNF528Q3MIS6 628 aa14.22□□□□□ -0.13
VPS26A-209ENST00000497564 TTMPQ5BVD1 217 aa14.22□□□□□ -0.13
VPS26A-209ENST00000497564 ESRP1Q6NXG1 681 aaKnown RBP14.22□□□□□ -0.13
VPS26A-209ENST00000497564 BRAT1Q6PJG6 821 aa14.22□□□□□ -0.13
VPS26A-209ENST00000497564 BLOC1S5Q8TDH9 187 aa14.22□□□□□ -0.13
VPS26A-209ENST00000497564 KCNV2Q8TDN2 545 aa14.22□□□□□ -0.13
VPS26A-209ENST00000497564 STYXQ8WUJ0 223 aa14.22□□□□□ -0.13
VPS26A-209ENST00000497564 PDCD6IPQ8WUM4 868 aaKnown RBP14.22□□□□□ -0.13
VPS26A-209ENST00000497564 DCAKDQ8WVC6 231 aa14.22□□□□□ -0.13
VPS26A-209ENST00000497564 ARL8AQ96BM9 186 aa14.22□□□□□ -0.13
VPS26A-209ENST00000497564 TLCD1Q96CP7 247 aa14.22□□□□□ -0.13
VPS26A-209ENST00000497564 ATP6V1G3Q96LB4 118 aa14.22□□□□□ -0.13
VPS26A-209ENST00000497564 MCCC1Q96RQ3 725 aaPredicted RBP14.22□□□□□ -0.13
VPS26A-209ENST00000497564 STMN4Q9H169 189 aaPredicted RBP14.22□□□□□ -0.13
VPS26A-209ENST00000497564 SMYD2Q9NRG4 433 aa14.22□□□□□ -0.13
VPS26A-209ENST00000497564 SUN2Q9UH99 717 aa14.22□□□□□ -0.13
VPS26A-209ENST00000497564 IL36AQ9UHA7 158 aa14.22□□□□□ -0.13
VPS26A-209ENST00000497564 DCHS1Q96JQ0 3298 aa14.21□□□□□ -0.13
VPS26A-209ENST00000497564 SDK1Q7Z5N4 2213 aa14.21□□□□□ -0.13
VPS26A-209ENST00000497564 TLDC2A0PJX2 215 aa14.21□□□□□ -0.13
VPS26A-209ENST00000497564 CAPN8A6NHC0 703 aa14.21□□□□□ -0.13
VPS26A-209ENST00000497564 CXorf49A8MYA2 514 aaPredicted RBP14.21□□□□□ -0.13
VPS26A-209ENST00000497564 K7EQS6 105 aa14.21□□□□□ -0.13
VPS26A-209ENST00000497564 RGS16O15492 202 aaPredicted RBP14.21□□□□□ -0.13
VPS26A-209ENST00000497564 PRNPP04156 253 aa14.21□□□□□ -0.13
VPS26A-209ENST00000497564 UGT2B4P06133 528 aa14.21□□□□□ -0.13
VPS26A-209ENST00000497564 DRD1P21728 446 aa14.21□□□□□ -0.13
VPS26A-209ENST00000497564 ARNTP27540 789 aa14.21□□□□□ -0.13
VPS26A-209ENST00000497564 IL12RB1P42701 662 aa14.21□□□□□ -0.13
VPS26A-209ENST00000497564 PXNP49023 591 aaPredicted RBP14.21□□□□□ -0.13
VPS26A-209ENST00000497564 CCR3P51677 355 aa14.21□□□□□ -0.13
VPS26A-209ENST00000497564 ZNF140P52738 457 aaPredicted RBP14.21□□□□□ -0.13
VPS26A-209ENST00000497564 POLR2LP62875 67 aaKnown RBP14.21□□□□□ -0.13
VPS26A-209ENST00000497564 ELAVL3Q14576 367 aaKnown RBP14.21□□□□□ -0.13
VPS26A-209ENST00000497564 CNGA3Q16281 694 aa14.21□□□□□ -0.13
VPS26A-209ENST00000497564 SKIDA1Q1XH10 827 aa14.21□□□□□ -0.13
VPS26A-209ENST00000497564 C9orf64Q5T6V5 341 aa14.21□□□□□ -0.13
VPS26A-209ENST00000497564 EGFLAMQ63HQ2 1017 aa14.21□□□□□ -0.13
VPS26A-209ENST00000497564 SERPINA13PQ6UXR4 307 aa14.21□□□□□ -0.13
VPS26A-209ENST00000497564 GLT6D1Q7Z4J2 308 aa14.21□□□□□ -0.13
VPS26A-209ENST00000497564 KCNMB4Q86W47 210 aa14.21□□□□□ -0.13
VPS26A-209ENST00000497564 SLC26A11Q86WA9 606 aa14.21□□□□□ -0.13
VPS26A-209ENST00000497564 ZSWIM9Q86XI8 627 aa14.21□□□□□ -0.13
VPS26A-209ENST00000497564 CNTN4Q8IWV2 1026 aa14.21□□□□□ -0.13
VPS26A-209ENST00000497564 UNC5BQ8IZJ1 945 aa14.21□□□□□ -0.13
VPS26A-209ENST00000497564 NDUFAF2Q8N183 169 aa14.21□□□□□ -0.13
VPS26A-209ENST00000497564 TTC30BQ8N4P2 665 aa14.21□□□□□ -0.13
VPS26A-209ENST00000497564 ZBTB44Q8NCP5 570 aa14.21□□□□□ -0.13
VPS26A-209ENST00000497564 TMIEQ8NEW7 156 aa14.21□□□□□ -0.13
VPS26A-209ENST00000497564 MDGA1Q8NFP4 955 aa14.21□□□□□ -0.13
VPS26A-209ENST00000497564 OR13J1Q8NGT2 312 aa14.21□□□□□ -0.13
VPS26A-209ENST00000497564 OR8D1Q8WZ84 308 aa14.21□□□□□ -0.13
VPS26A-209ENST00000497564 IER2Q9BTL4 223 aa14.21□□□□□ -0.13
VPS26A-209ENST00000497564 NLE1Q9NVX2 485 aaPredicted RBP14.21□□□□□ -0.13
VPS26A-209ENST00000497564 ZSCAN32Q9NX65 697 aa14.21□□□□□ -0.13
VPS26A-209ENST00000497564 NSMCE4AQ9NXX6 385 aa14.21□□□□□ -0.13
VPS26A-209ENST00000497564 PIKFYVEQ9Y2I7 2098 aa14.21□□□□□ -0.14
VPS26A-209ENST00000497564 C2orf81A6NN90 581 aa14.2□□□□□ -0.14
VPS26A-209ENST00000497564 CHURC1-FNTBB4DL54 471 aa14.2□□□□□ -0.14
VPS26A-209ENST00000497564 SLC7A4O43246 635 aa14.2□□□□□ -0.14
VPS26A-209ENST00000497564 BNIP3LO60238 219 aa14.2□□□□□ -0.14
VPS26A-209ENST00000497564 LEFTY1O75610 366 aa14.2□□□□□ -0.14
VPS26A-209ENST00000497564 PRKCGP05129 697 aa14.2□□□□□ -0.14
VPS26A-209ENST00000497564 CTSLP07711 333 aa14.2□□□□□ -0.14
VPS26A-209ENST00000497564 INHBAP08476 426 aa14.2□□□□□ -0.14
VPS26A-209ENST00000497564 LPOP22079 712 aaPredicted RBP14.2□□□□□ -0.14
VPS26A-209ENST00000497564 ATP5DP30049 168 aa14.2□□□□□ -0.14
VPS26A-209ENST00000497564 SLC8A1P32418 973 aa14.2□□□□□ -0.14
VPS26A-209ENST00000497564 KIR2DL1P43626 348 aaPredicted RBP14.2□□□□□ -0.14
VPS26A-209ENST00000497564 SLCO1A2P46721 670 aa14.2□□□□□ -0.14
VPS26A-209ENST00000497564 FNTBP49356 437 aa14.2□□□□□ -0.14
VPS26A-209ENST00000497564 SERPINB9P50453 376 aa14.2□□□□□ -0.14
VPS26A-209ENST00000497564 SEC13P55735 322 aa14.2□□□□□ -0.14
VPS26A-209ENST00000497564 SRSF5Q13243 272 aaKnown RBP14.2□□□□□ -0.14
VPS26A-209ENST00000497564 ZNF805Q5CZA5 627 aa14.2□□□□□ -0.14
VPS26A-209ENST00000497564 ARSIQ5FYB1 569 aa14.2□□□□□ -0.14
VPS26A-209ENST00000497564 TEDDM1Q5T9Z0 273 aa14.2□□□□□ -0.14
VPS26A-209ENST00000497564 RASSF3Q86WH2 238 aa14.2□□□□□ -0.14
VPS26A-209ENST00000497564 CTAGE3PQ8IX95 158 aa14.2□□□□□ -0.14
VPS26A-209ENST00000497564 LMNTD2Q8IXW0 634 aa14.2□□□□□ -0.14
VPS26A-209ENST00000497564 KRT222Q8N1A0 295 aa14.2□□□□□ -0.14
VPS26A-209ENST00000497564 SYNPOQ8N3V7 929 aa14.2□□□□□ -0.14
VPS26A-209ENST00000497564 PPM1NQ8N819 430 aa14.2□□□□□ -0.14
VPS26A-209ENST00000497564 SUMF1Q8NBK3 374 aa14.2□□□□□ -0.14
VPS26A-209ENST00000497564 RPLP0P6Q8NHW5 317 aa14.2□□□□□ -0.14
VPS26A-209ENST00000497564 SCRN2Q96FV2 425 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms