RNA–Protein interactions for RNA: ENST00000497511.5

SKAP2-209, Transcript of src kinase associated phosphoprotein 2, human

TSL 4

Gene SKAP2, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKAP2-209	ENST00000497511	HK3	P52790	923 aa		10.94	□□□□□ -0.66
SKAP2-209	ENST00000497511	SLC6A3	Q01959	620 aa		10.94	□□□□□ -0.66
SKAP2-209	ENST00000497511	GNA12	Q03113	381 aa		10.94	□□□□□ -0.66
SKAP2-209	ENST00000497511	ARHGEF7	Q14155	803 aa		10.94	□□□□□ -0.66
SKAP2-209	ENST00000497511	ARHGAP44	Q17R89	818 aa		10.94	□□□□□ -0.66
SKAP2-209	ENST00000497511	KLHL40	Q2TBA0	621 aa		10.94	□□□□□ -0.66
SKAP2-209	ENST00000497511	MAP9	Q49MG5	647 aa		10.94	□□□□□ -0.66
SKAP2-209	ENST00000497511	KLHL10	Q6JEL2	608 aa		10.94	□□□□□ -0.66
SKAP2-209	ENST00000497511	ZNF783	Q6ZMS7	281 aa		10.94	□□□□□ -0.66
SKAP2-209	ENST00000497511	ENOSF1	Q7L5Y1	443 aa		10.94	□□□□□ -0.66
SKAP2-209	ENST00000497511	ZNF354C	Q86Y25	554 aa		10.94	□□□□□ -0.66
SKAP2-209	ENST00000497511	C1orf131	Q8NDD1	294 aa	Known RBP	10.94	□□□□□ -0.66
SKAP2-209	ENST00000497511	ATL2	Q8NHH9	583 aa		10.94	□□□□□ -0.66
SKAP2-209	ENST00000497511	LMO3	Q8TAP4	145 aa		10.94	□□□□□ -0.66
SKAP2-209	ENST00000497511	ZNF564	Q8TBZ8	553 aa	Predicted RBP	10.94	□□□□□ -0.66
SKAP2-209	ENST00000497511	CENPT	Q96BT3	561 aa		10.94	□□□□□ -0.66
SKAP2-209	ENST00000497511	FRMD6	Q96NE9	622 aa		10.94	□□□□□ -0.66
SKAP2-209	ENST00000497511	KLHL32	Q96NJ5	620 aa		10.94	□□□□□ -0.66
SKAP2-209	ENST00000497511	GSDMA	Q96QA5	445 aa		10.94	□□□□□ -0.66
SKAP2-209	ENST00000497511	WRAP53	Q9BUR4	548 aa	Known RBP	10.94	□□□□□ -0.66
SKAP2-209	ENST00000497511	EPN3	Q9H201	632 aa		10.94	□□□□□ -0.66
SKAP2-209	ENST00000497511	PDCL3	Q9H2J4	239 aa		10.94	□□□□□ -0.66
SKAP2-209	ENST00000497511	ADNP	Q9H2P0	1102 aa		10.94	□□□□□ -0.66
SKAP2-209	ENST00000497511	ARHGEF38	Q9NXL2	777 aa		10.94	□□□□□ -0.66
SKAP2-209	ENST00000497511	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	10.94	□□□□□ -0.66
SKAP2-209	ENST00000497511	KL	Q9UEF7	1012 aa		10.94	□□□□□ -0.66
SKAP2-209	ENST00000497511	HPCAL4	Q9UM19	191 aa		10.94	□□□□□ -0.66
SKAP2-209	ENST00000497511	CNTN6	Q9UQ52	1028 aa		10.94	□□□□□ -0.66
SKAP2-209	ENST00000497511	RNF215	Q9Y6U7	377 aa		10.94	□□□□□ -0.66
SKAP2-209	ENST00000497511	COL12A1	Q99715	3063 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	RP1	P56715	2156 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	KIF26B	Q2KJY2	2108 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	DRGX	A6NNA5	263 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	TMEM110-MUSTN1	A8MSY1	372 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	STMND1	H3BQB6	276 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	ZNF821	O75541	412 aa	Predicted RBP	10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	TNF	P01375	233 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	ERBB2	P04626	1255 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	CR2	P20023	1033 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	KRT9	P35527	623 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	ETFB	P38117	255 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	ETV5	P41161	510 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	PREP	P48147	710 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	CXCR3	P49682	368 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	POLE2	P56282	527 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	GEMIN4	P57678	1058 aa	Known RBP	10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	SNRPD1	P62314	119 aa	Known RBP	10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	ARF5	P84085	180 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	RAD51	Q06609	339 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	KCNAB2	Q13303	367 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	BIRC2	Q13490	618 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	NCAPH	Q15003	741 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	IGFBP7	Q16270	282 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	ALG11	Q2TAA5	492 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	COBLL1	Q53SF7	1204 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	ACBD5	Q5T8D3	534 aa	Predicted RBP	10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	ISM2	Q6H9L7	571 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	OLFML1	Q6UWY5	402 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	SLC26A9	Q7LBE3	791 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	OR2AP1	Q8NGE2	309 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	HTR3C	Q8WXA8	447 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	FUCA2	Q9BTY2	467 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	OSBPL1A	Q9BXW6	950 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	ZYG11B	Q9C0D3	744 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	SCAND2P	Q9GZW5	306 aa	Predicted RBP	10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	MBNL1	Q9NR56	388 aa	Known RBP	10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	HOOK1	Q9UJC3	728 aa	Known RBP	10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	PNMA8B	Q9ULN7	279 aa	Predicted RBP	10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	ACTL7A	Q9Y615	435 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	BOD1L1	Q8NFC6	3051 aa		10.93	□□□□□ -0.66
SKAP2-209	ENST00000497511	GOLGA6L4	A6NEF3	574 aa		10.92	□□□□□ -0.66
SKAP2-209	ENST00000497511		B4DGG1	531 aa		10.92	□□□□□ -0.66
SKAP2-209	ENST00000497511	ZMPSTE24	O75844	475 aa		10.92	□□□□□ -0.66
SKAP2-209	ENST00000497511	POP4	O95707	220 aa	Known RBP	10.92	□□□□□ -0.66
SKAP2-209	ENST00000497511	WT1	P19544	449 aa	Predicted RBP	10.92	□□□□□ -0.66
SKAP2-209	ENST00000497511	GSTT1	P30711	240 aa		10.92	□□□□□ -0.66
SKAP2-209	ENST00000497511	CCR10	P46092	362 aa		10.92	□□□□□ -0.66
SKAP2-209	ENST00000497511	PEX5	P50542	639 aa		10.92	□□□□□ -0.66
SKAP2-209	ENST00000497511	SRP54	P61011	504 aa	Known RBP	10.92	□□□□□ -0.66
SKAP2-209	ENST00000497511	LRRC14	Q15048	493 aa		10.92	□□□□□ -0.66
SKAP2-209	ENST00000497511	IRF4	Q15306	451 aa		10.92	□□□□□ -0.66
SKAP2-209	ENST00000497511	MYLK3	Q32MK0	819 aa		10.92	□□□□□ -0.66
SKAP2-209	ENST00000497511	NXPE4	Q6UWF7	544 aa		10.92	□□□□□ -0.66
SKAP2-209	ENST00000497511	GDPD4	Q6W3E5	623 aa		10.92	□□□□□ -0.66
SKAP2-209	ENST00000497511	LEKR1	Q6ZMV7	388 aa		10.92	□□□□□ -0.66
SKAP2-209	ENST00000497511	TAF8	Q7Z7C8	310 aa		10.92	□□□□□ -0.66
SKAP2-209	ENST00000497511	CREBRF	Q8IUR6	639 aa		10.92	□□□□□ -0.66
SKAP2-209	ENST00000497511	FAM20C	Q8IXL6	584 aa		10.92	□□□□□ -0.66
SKAP2-209	ENST00000497511	FAM46D	Q8NEK8	389 aa		10.92	□□□□□ -0.66
SKAP2-209	ENST00000497511	SNX21	Q969T3	373 aa		10.92	□□□□□ -0.66
SKAP2-209	ENST00000497511	ISG20	Q96AZ6	181 aa	Known RBP	10.92	□□□□□ -0.66
SKAP2-209	ENST00000497511	DHTKD1	Q96HY7	919 aa	Predicted RBP	10.92	□□□□□ -0.66
SKAP2-209	ENST00000497511	FAM81B	Q96LP2	452 aa		10.92	□□□□□ -0.66
SKAP2-209	ENST00000497511	C1orf74	Q96LT6	269 aa		10.92	□□□□□ -0.66
SKAP2-209	ENST00000497511	NPY6R	Q99463	290 aa		10.92	□□□□□ -0.66
SKAP2-209	ENST00000497511	DPEP2	Q9H4A9	486 aa		10.92	□□□□□ -0.66
SKAP2-209	ENST00000497511	LRRC4C	Q9HCJ2	640 aa		10.92	□□□□□ -0.66
SKAP2-209	ENST00000497511	ANLN	Q9NQW6	1124 aa		10.92	□□□□□ -0.66
SKAP2-209	ENST00000497511	LRIT1	Q9P2V4	623 aa		10.92	□□□□□ -0.66

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms