RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 LYSMD3Q7Z3D4 306 aa19.45■□□□□ 0.7
HDAC4-212ENST00000495497 PTAR1Q7Z6K3 402 aaPredicted RBP19.45■□□□□ 0.7
HDAC4-212ENST00000495497 SPATS2Q86XZ4 545 aaKnown RBP19.45■□□□□ 0.7
HDAC4-212ENST00000495497 PELI3Q8N2H9 469 aa19.45■□□□□ 0.7
HDAC4-212ENST00000495497 CCDC89Q8N998 374 aa19.45■□□□□ 0.7
HDAC4-212ENST00000495497 MAGOHBQ96A72 148 aaKnown RBP19.45■□□□□ 0.7
HDAC4-212ENST00000495497 TRIM44Q96DX7 344 aaPredicted RBP19.45■□□□□ 0.7
HDAC4-212ENST00000495497 KLHDC7BQ96G42 594 aa19.45■□□□□ 0.7
HDAC4-212ENST00000495497 LYSMD1Q96S90 227 aa19.45■□□□□ 0.7
HDAC4-212ENST00000495497 NAP1L3Q99457 506 aaPredicted RBP19.45■□□□□ 0.7
HDAC4-212ENST00000495497 FSD1LQ9BXM9 530 aa19.45■□□□□ 0.7
HDAC4-212ENST00000495497 CD84Q9UIB8 345 aa19.45■□□□□ 0.7
HDAC4-212ENST00000495497 AAR2Q9Y312 384 aaKnown RBP19.45■□□□□ 0.7
HDAC4-212ENST00000495497 SAR1BQ9Y6B6 198 aa19.45■□□□□ 0.7
HDAC4-212ENST00000495497 RALGAPA1Q6GYQ0 2036 aa19.45■□□□□ 0.7
HDAC4-212ENST00000495497 RIF1Q5UIP0 2472 aaKnown RBP19.44■□□□□ 0.7
HDAC4-212ENST00000495497 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.44■□□□□ 0.7
HDAC4-212ENST00000495497 CDX4O14627 284 aaPredicted RBP19.44■□□□□ 0.7
HDAC4-212ENST00000495497 SYPP08247 313 aa19.44■□□□□ 0.7
HDAC4-212ENST00000495497 RPL22P35268 128 aaKnown RBP19.44■□□□□ 0.7
HDAC4-212ENST00000495497 ADRA1AP35348 466 aa19.44■□□□□ 0.7
HDAC4-212ENST00000495497 NXPH1P58417 271 aa19.44■□□□□ 0.7
HDAC4-212ENST00000495497 ETF1P62495 437 aaKnown RBP19.44■□□□□ 0.7
HDAC4-212ENST00000495497 AGERQ15109 404 aa19.44■□□□□ 0.7
HDAC4-212ENST00000495497 HLA-BQ31612 363 aa19.44■□□□□ 0.7
HDAC4-212ENST00000495497 TPRG1LQ5T0D9 272 aa19.44■□□□□ 0.7
HDAC4-212ENST00000495497 TECPR1Q7Z6L1 1165 aa19.44■□□□□ 0.7
HDAC4-212ENST00000495497 ABI3BPQ7Z7G0 1075 aa19.44■□□□□ 0.7
HDAC4-212ENST00000495497 CREG2Q8IUH2 290 aa19.44■□□□□ 0.7
HDAC4-212ENST00000495497 SLC22A18ASQ8N1D0 253 aa19.44■□□□□ 0.7
HDAC4-212ENST00000495497 MINDY1Q8N5J2 469 aa19.44■□□□□ 0.7
HDAC4-212ENST00000495497 DENND6BQ8NEG7 585 aa19.44■□□□□ 0.7
HDAC4-212ENST00000495497 EID2BQ96D98 161 aa19.44■□□□□ 0.7
HDAC4-212ENST00000495497 NUS1Q96E22 293 aa19.44■□□□□ 0.7
HDAC4-212ENST00000495497 C1QTNF7Q9BXJ2 289 aa19.44■□□□□ 0.7
HDAC4-212ENST00000495497 CAAP1Q9H8G2 361 aa19.44■□□□□ 0.7
HDAC4-212ENST00000495497 ETNK1Q9HBU6 452 aa19.44■□□□□ 0.7
HDAC4-212ENST00000495497 HOMER3Q9NSC5 361 aa19.44■□□□□ 0.7
HDAC4-212ENST00000495497 PCDH15Q96QU1 1955 aa19.43■□□□□ 0.7
HDAC4-212ENST00000495497 A6NNZ2 444 aa19.43■□□□□ 0.7
HDAC4-212ENST00000495497 AURKAO14965 403 aa19.43■□□□□ 0.7
HDAC4-212ENST00000495497 EPOP01588 193 aa19.43■□□□□ 0.7
HDAC4-212ENST00000495497 SLC4A1P02730 911 aa19.43■□□□□ 0.7
HDAC4-212ENST00000495497 ZNF30P17039 623 aa19.43■□□□□ 0.7
HDAC4-212ENST00000495497 CASQ1P31415 396 aa19.43■□□□□ 0.7
HDAC4-212ENST00000495497 COILP38432 576 aaPredicted RBP19.43■□□□□ 0.7
HDAC4-212ENST00000495497 TNNT3P45378 269 aaPredicted RBP19.43■□□□□ 0.7
HDAC4-212ENST00000495497 STC1P52823 247 aa19.43■□□□□ 0.7
HDAC4-212ENST00000495497 ATXN3P54252 364 aaPredicted RBP19.43■□□□□ 0.7
HDAC4-212ENST00000495497 INPP5AQ14642 412 aa19.43■□□□□ 0.7
HDAC4-212ENST00000495497 TRIP13Q15645 432 aaPredicted RBP19.43■□□□□ 0.7
HDAC4-212ENST00000495497 HS1BP3Q53T59 392 aa19.43■□□□□ 0.7
HDAC4-212ENST00000495497 KYAT3Q6YP21 454 aaKnown RBP19.43■□□□□ 0.7
HDAC4-212ENST00000495497 IQCHQ86VS3 1027 aa19.43■□□□□ 0.7
HDAC4-212ENST00000495497 KLHDC8BQ8IXV7 354 aa19.43■□□□□ 0.7
HDAC4-212ENST00000495497 PDCD7Q8N8D1 485 aaKnown RBP19.43■□□□□ 0.7
HDAC4-212ENST00000495497 SKA1Q96BD8 255 aa19.43■□□□□ 0.7
HDAC4-212ENST00000495497 DTD2Q96FN9 168 aa19.43■□□□□ 0.7
HDAC4-212ENST00000495497 TBL1YQ9BQ87 522 aa19.43■□□□□ 0.7
HDAC4-212ENST00000495497 GAREM1Q9H706 876 aa19.43■□□□□ 0.7
HDAC4-212ENST00000495497 ZNF711Q9Y462 761 aa19.43■□□□□ 0.7
HDAC4-212ENST00000495497 LAMA1P25391 3075 aa19.43■□□□□ 0.7
HDAC4-212ENST00000495497 ADAMTS9Q9P2N4 1935 aa19.43■□□□□ 0.7
HDAC4-212ENST00000495497 C4orf47A7E2U8 309 aa19.42■□□□□ 0.7
HDAC4-212ENST00000495497 K7ESM1 405 aa19.42■□□□□ 0.7
HDAC4-212ENST00000495497 PSMD11O00231 422 aa19.42■□□□□ 0.7
HDAC4-212ENST00000495497 FOXD2O60548 495 aaPredicted RBP19.42■□□□□ 0.7
HDAC4-212ENST00000495497 HLA-DPA1P20036 260 aa19.42■□□□□ 0.7
HDAC4-212ENST00000495497 ACTN2P35609 894 aa19.42■□□□□ 0.7
HDAC4-212ENST00000495497 PFN3P60673 137 aa19.42■□□□□ 0.7
HDAC4-212ENST00000495497 CYP1B1Q16678 543 aa19.42■□□□□ 0.7
HDAC4-212ENST00000495497 KCTD11Q693B1 232 aa19.42■□□□□ 0.7
HDAC4-212ENST00000495497 CCDC137Q6PK04 289 aaKnown RBP19.42■□□□□ 0.7
HDAC4-212ENST00000495497 RANBP10Q6VN20 620 aa19.42■□□□□ 0.7
HDAC4-212ENST00000495497 NYAP1Q6ZVC0 841 aa19.42■□□□□ 0.7
HDAC4-212ENST00000495497 ATL2Q8NHH9 583 aa19.42■□□□□ 0.7
HDAC4-212ENST00000495497 SCAMP4Q969E2 229 aa19.42■□□□□ 0.7
HDAC4-212ENST00000495497 C16orf45Q96MC5 204 aaPredicted RBP19.42■□□□□ 0.7
HDAC4-212ENST00000495497 ABCG8Q9H221 673 aa19.42■□□□□ 0.7
HDAC4-212ENST00000495497 ZFYVE1Q9HBF4 777 aa19.42■□□□□ 0.7
HDAC4-212ENST00000495497 MAGEE1Q9HCI5 957 aa19.42■□□□□ 0.7
HDAC4-212ENST00000495497 TMEM9BQ9NQ34 198 aa19.42■□□□□ 0.7
HDAC4-212ENST00000495497 PAK5Q9P286 719 aa19.42■□□□□ 0.7
HDAC4-212ENST00000495497 FAM186AA6NE01 2351 aa19.41■□□□□ 0.7
HDAC4-212ENST00000495497 LRRK1Q38SD2 2015 aa19.41■□□□□ 0.7
HDAC4-212ENST00000495497 PDE2AO00408 941 aaPredicted RBP19.41■□□□□ 0.7
HDAC4-212ENST00000495497 PHF2O75151 1096 aa19.41■□□□□ 0.7
HDAC4-212ENST00000495497 FGF1P05230 155 aa19.41■□□□□ 0.7
HDAC4-212ENST00000495497 TERF1P54274 439 aa19.41■□□□□ 0.7
HDAC4-212ENST00000495497 IL9RQ01113 521 aa19.41■□□□□ 0.7
HDAC4-212ENST00000495497 LMNB2Q03252 620 aa19.41■□□□□ 0.7
HDAC4-212ENST00000495497 PDE1CQ14123 709 aaPredicted RBP19.41■□□□□ 0.7
HDAC4-212ENST00000495497 UAP1L1Q3KQV9 507 aa19.41■□□□□ 0.7
HDAC4-212ENST00000495497 STPG1Q5TH74 334 aa19.41■□□□□ 0.7
HDAC4-212ENST00000495497 DENND5AQ6IQ26 1287 aa19.41■□□□□ 0.7
HDAC4-212ENST00000495497 BLOC1S5Q8TDH9 187 aa19.41■□□□□ 0.7
HDAC4-212ENST00000495497 PPP1R2P1Q96PQ5 205 aa19.41■□□□□ 0.7
HDAC4-212ENST00000495497 AGAP2Q99490 1192 aa19.41■□□□□ 0.7
HDAC4-212ENST00000495497 GPR63Q9BZJ6 419 aa19.41■□□□□ 0.7
HDAC4-212ENST00000495497 ZDHHC5Q9C0B5 715 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms