RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 DNAJC24Q6P3W2 148 aa14.27□□□□□ -0.13
VARS-228ENST00000495010 SLC30A9Q6PML9 568 aa14.27□□□□□ -0.13
VARS-228ENST00000495010 ZNF438Q7Z4V0 828 aa14.27□□□□□ -0.13
VARS-228ENST00000495010 FAM129CQ86XR2 697 aa14.27□□□□□ -0.13
VARS-228ENST00000495010 NRSN1Q8IZ57 195 aa14.27□□□□□ -0.13
VARS-228ENST00000495010 TSEN2Q8NCE0 465 aaKnown RBP14.27□□□□□ -0.13
VARS-228ENST00000495010 C3orf20Q8ND61 904 aa14.27□□□□□ -0.13
VARS-228ENST00000495010 ART4Q93070 314 aa14.27□□□□□ -0.13
VARS-228ENST00000495010 NUS1Q96E22 293 aa14.27□□□□□ -0.13
VARS-228ENST00000495010 DPYSL5Q9BPU6 564 aa14.27□□□□□ -0.13
VARS-228ENST00000495010 DDA1Q9BW61 102 aa14.27□□□□□ -0.13
VARS-228ENST00000495010 ASPSCR1Q9BZE9 553 aa14.27□□□□□ -0.13
VARS-228ENST00000495010 EPN3Q9H201 632 aa14.27□□□□□ -0.13
VARS-228ENST00000495010 SP110Q9HB58 689 aa14.27□□□□□ -0.13
VARS-228ENST00000495010 KCTD5Q9NXV2 234 aa14.27□□□□□ -0.13
VARS-228ENST00000495010 GOLGA6AQ9NYA3 693 aa14.27□□□□□ -0.13
VARS-228ENST00000495010 CAPN5O15484 640 aaPredicted RBP14.26□□□□□ -0.13
VARS-228ENST00000495010 TPM2P07951 284 aa14.26□□□□□ -0.13
VARS-228ENST00000495010 UNGP13051 313 aaPredicted RBP14.26□□□□□ -0.13
VARS-228ENST00000495010 ERCC5P28715 1186 aaPredicted RBP14.26□□□□□ -0.13
VARS-228ENST00000495010 RGRP47804 291 aa14.26□□□□□ -0.13
VARS-228ENST00000495010 SCNN1BP51168 640 aa14.26□□□□□ -0.13
VARS-228ENST00000495010 ZNF143P52747 638 aaPredicted RBP14.26□□□□□ -0.13
VARS-228ENST00000495010 GSCP56915 257 aaPredicted RBP14.26□□□□□ -0.13
VARS-228ENST00000495010 NR1D2Q14995 579 aa14.26□□□□□ -0.13
VARS-228ENST00000495010 DCAF12Q5T6F0 453 aa14.26□□□□□ -0.13
VARS-228ENST00000495010 NKAIN2Q5VXU1 208 aa14.26□□□□□ -0.13
VARS-228ENST00000495010 DENND2CQ68D51 928 aa14.26□□□□□ -0.13
VARS-228ENST00000495010 C17orf82Q86X59 251 aaPredicted RBP14.26□□□□□ -0.13
VARS-228ENST00000495010 OR4D9Q8NGE8 314 aa14.26□□□□□ -0.13
VARS-228ENST00000495010 KIAA1143Q96AT1 154 aaPredicted RBP14.26□□□□□ -0.13
VARS-228ENST00000495010 ECHDC3Q96DC8 303 aa14.26□□□□□ -0.13
VARS-228ENST00000495010 AHCYL2Q96HN2 611 aaKnown RBP14.26□□□□□ -0.13
VARS-228ENST00000495010 MCEEQ96PE7 176 aa14.26□□□□□ -0.13
VARS-228ENST00000495010 SLC39A8Q9C0K1 460 aa14.26□□□□□ -0.13
VARS-228ENST00000495010 LRRC19Q9H756 370 aa14.26□□□□□ -0.13
VARS-228ENST00000495010 NLRC4Q9NPP4 1024 aa14.26□□□□□ -0.13
VARS-228ENST00000495010 TRNAU1APQ9NX07 287 aaKnown RBP14.26□□□□□ -0.13
VARS-228ENST00000495010 KCNK4Q9NYG8 393 aa14.26□□□□□ -0.13
VARS-228ENST00000495010 ANAPC2Q9UJX6 822 aa14.26□□□□□ -0.13
VARS-228ENST00000495010 B3GALT1Q9Y5Z6 326 aa14.26□□□□□ -0.13
VARS-228ENST00000495010 EFCAB7A8K855 629 aa14.25□□□□□ -0.13
VARS-228ENST00000495010 DFFAO00273 331 aa14.25□□□□□ -0.13
VARS-228ENST00000495010 EEF2KO00418 725 aaKnown RBP14.25□□□□□ -0.13
VARS-228ENST00000495010 RAD1O60671 282 aa14.25□□□□□ -0.13
VARS-228ENST00000495010 GP1BBP13224 206 aa14.25□□□□□ -0.13
VARS-228ENST00000495010 MPSTP25325 297 aa14.25□□□□□ -0.13
VARS-228ENST00000495010 EEF1GP26641 437 aaKnown RBP14.25□□□□□ -0.13
VARS-228ENST00000495010 AK4P27144 223 aaPredicted RBP14.25□□□□□ -0.13
VARS-228ENST00000495010 CASRP41180 1078 aa14.25□□□□□ -0.13
VARS-228ENST00000495010 RENBPP51606 427 aa14.25□□□□□ -0.13
VARS-228ENST00000495010 RAB15P59190 212 aa14.25□□□□□ -0.13
VARS-228ENST00000495010 NSUN2Q08J23 767 aaKnown RBP eCLIP14.25□□□□□ -0.13
VARS-228ENST00000495010 PTP4A2Q12974 167 aa14.25□□□□□ -0.13
VARS-228ENST00000495010 RFTN1Q14699 578 aaPredicted RBP14.25□□□□□ -0.13
VARS-228ENST00000495010 NCAPHQ15003 741 aa14.25□□□□□ -0.13
VARS-228ENST00000495010 IGFBP7Q16270 282 aa14.25□□□□□ -0.13
VARS-228ENST00000495010 CLEC16AQ2KHT3 1053 aa14.25□□□□□ -0.13
VARS-228ENST00000495010 TCP11X2Q5H9J9 407 aa14.25□□□□□ -0.13
VARS-228ENST00000495010 DCUN1D2Q6PH85 259 aa14.25□□□□□ -0.13
VARS-228ENST00000495010 HEATR4Q86WZ0 1026 aa14.25□□□□□ -0.13
VARS-228ENST00000495010 NRROSQ86YC3 692 aa14.25□□□□□ -0.13
VARS-228ENST00000495010 PHF13Q86YI8 300 aaPredicted RBP14.25□□□□□ -0.13
VARS-228ENST00000495010 C9orf43Q8TAL5 461 aaPredicted RBP14.25□□□□□ -0.13
VARS-228ENST00000495010 PMEPA1Q969W9 287 aa14.25□□□□□ -0.13
VARS-228ENST00000495010 CNPY3Q9BT09 278 aa14.25□□□□□ -0.13
VARS-228ENST00000495010 EFHD1Q9BUP0 239 aa14.25□□□□□ -0.13
VARS-228ENST00000495010 VPS16Q9H269 839 aa14.25□□□□□ -0.13
VARS-228ENST00000495010 GANQ9H2C0 597 aa14.25□□□□□ -0.13
VARS-228ENST00000495010 ZNF71Q9NQZ8 489 aaPredicted RBP14.25□□□□□ -0.13
VARS-228ENST00000495010 FAM207AQ9NSI2 230 aaPredicted RBP14.25□□□□□ -0.13
VARS-228ENST00000495010 TAB2Q9NYJ8 693 aa14.25□□□□□ -0.13
VARS-228ENST00000495010 B4GALT6Q9UBX8 382 aa14.25□□□□□ -0.13
VARS-228ENST00000495010 SUFUQ9UMX1 484 aa14.25□□□□□ -0.13
VARS-228ENST00000495010 UBR5O95071 2799 aaPredicted RBP14.25□□□□□ -0.13
VARS-228ENST00000495010 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.24□□□□□ -0.13
VARS-228ENST00000495010 CEACAM5P06731 702 aa14.24□□□□□ -0.13
VARS-228ENST00000495010 MAN1A1P33908 653 aa14.24□□□□□ -0.13
VARS-228ENST00000495010 NOP2P46087 812 aaKnown RBP14.24□□□□□ -0.13
VARS-228ENST00000495010 AP1S1P61966 158 aa14.24□□□□□ -0.13
VARS-228ENST00000495010 UBE2HP62256 183 aa14.24□□□□□ -0.13
VARS-228ENST00000495010 FOXK1P85037 733 aa14.24□□□□□ -0.13
VARS-228ENST00000495010 CTBSQ01459 385 aa14.24□□□□□ -0.13
VARS-228ENST00000495010 FKBP15Q5T1M5 1219 aa14.24□□□□□ -0.13
VARS-228ENST00000495010 RAET1GQ6H3X3 334 aa14.24□□□□□ -0.13
VARS-228ENST00000495010 LURAP1LQ8IV03 231 aa14.24□□□□□ -0.13
VARS-228ENST00000495010 PELI3Q8N2H9 469 aa14.24□□□□□ -0.13
VARS-228ENST00000495010 PDCD6IPQ8WUM4 868 aaKnown RBP14.24□□□□□ -0.13
VARS-228ENST00000495010 COQ10AQ96MF6 247 aa14.24□□□□□ -0.13
VARS-228ENST00000495010 PCMTD1Q96MG8 357 aaPredicted RBP14.24□□□□□ -0.13
VARS-228ENST00000495010 TEFMQ96QE5 360 aaKnown RBP14.24□□□□□ -0.13
VARS-228ENST00000495010 PCDHB18PQ96TA0 734 aa14.24□□□□□ -0.13
VARS-228ENST00000495010 TEX101Q9BY14 249 aa14.24□□□□□ -0.13
VARS-228ENST00000495010 GPN2Q9H9Y4 310 aaPredicted RBP14.24□□□□□ -0.13
VARS-228ENST00000495010 SAMSN1Q9NSI8 373 aaKnown RBP14.24□□□□□ -0.13
VARS-228ENST00000495010 OCIAD1Q9NX40 245 aa14.24□□□□□ -0.13
VARS-228ENST00000495010 AP4E1Q9UPM8 1137 aa14.24□□□□□ -0.13
VARS-228ENST00000495010 SDK2Q58EX2 2172 aa14.24□□□□□ -0.13
VARS-228ENST00000495010 PTPN13Q12923 2485 aa14.24□□□□□ -0.13
VARS-228ENST00000495010 ZFC3H1O60293 1989 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms