RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 NDST3O95803 873 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 ITGAVP06756 1048 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 C1SP09871 688 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 GEMP55040 296 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 ETF1P62495 437 aaKnown RBP11.13□□□□□ -0.63
APTX-230ENST00000494649 MRPS25P82663 173 aaKnown RBP11.13□□□□□ -0.63
APTX-230ENST00000494649 MPP3Q13368 585 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 PRPSAP1Q14558 356 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 INPP5AQ14642 412 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 PTPRCAPQ14761 206 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 LRRC14Q15048 493 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 SLC1A5Q15758 541 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 ALS2CLQ60I27 953 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 CCDC70Q6NSX1 233 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 Q6ZSR6 202 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 MICALCLQ6ZW33 695 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 CREG2Q8IUH2 290 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 NDUFAF2Q8N183 169 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 SLC22A18ASQ8N1D0 253 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 TP53I13Q8NBR0 393 aaPredicted RBP11.13□□□□□ -0.63
APTX-230ENST00000494649 ACTRT1Q8TDG2 376 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 MAIP1Q8WWC4 291 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 CENPTQ96BT3 561 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 EID2BQ96D98 161 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 LENG8Q96PV6 779 aaPredicted RBP11.13□□□□□ -0.63
APTX-230ENST00000494649 MCCC1Q96RQ3 725 aaPredicted RBP11.13□□□□□ -0.63
APTX-230ENST00000494649 SUDS3Q9H7L9 328 aaPredicted RBP11.13□□□□□ -0.63
APTX-230ENST00000494649 ETNK1Q9HBU6 452 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 RAB6BQ9NRW1 208 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 BPTFQ12830 3046 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 A0A1W2PQ67 120 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 A0A1W2PR77 199 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 CCDC78A2IDD5 438 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 CFAP69A5D8W1 941 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 ARHGAP33O14559 1287 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 FPGTO14772 594 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 SDC3O75056 442 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 ANXA9O76027 345 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 TPH1P17752 444 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 STIP1P31948 543 aaKnown RBP11.13□□□□□ -0.63
APTX-230ENST00000494649 RPL22P35268 128 aaKnown RBP11.13□□□□□ -0.63
APTX-230ENST00000494649 ACTN2P35609 894 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 GRIA1P42261 906 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 LMAN1P49257 510 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 BASP1P80723 227 aaKnown RBP11.13□□□□□ -0.63
APTX-230ENST00000494649 PDE1CQ14123 709 aaPredicted RBP11.13□□□□□ -0.63
APTX-230ENST00000494649 TEAD4Q15561 434 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 PARP6Q2NL67 630 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 P3H1Q32P28 736 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 CCDC137Q6PK04 289 aaKnown RBP11.13□□□□□ -0.63
APTX-230ENST00000494649 SPATS2Q86XZ4 545 aaKnown RBP11.13□□□□□ -0.63
APTX-230ENST00000494649 KLHL7Q8IXQ5 586 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 MINDY1Q8N5J2 469 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 CEP76Q8TAP6 659 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 FUBP1Q96AE4 644 aaKnown RBP11.13□□□□□ -0.63
APTX-230ENST00000494649 NUS1Q96E22 293 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 KLHDC7BQ96G42 594 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 ABCG8Q9H221 673 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 GAREM1Q9H706 876 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 DMTF1Q9Y222 760 aa11.13□□□□□ -0.63
APTX-230ENST00000494649 AAR2Q9Y312 384 aaKnown RBP11.13□□□□□ -0.63
APTX-230ENST00000494649 LOC285095A0A1B0GVY8 99 aa11.12□□□□□ -0.63
APTX-230ENST00000494649 C4orf47A7E2U8 309 aa11.12□□□□□ -0.63
APTX-230ENST00000494649 E7EVH7 732 aa11.12□□□□□ -0.63
APTX-230ENST00000494649 TLR4O00206 839 aa11.12□□□□□ -0.63
APTX-230ENST00000494649 SUOXP51687 545 aa11.12□□□□□ -0.63
APTX-230ENST00000494649 HLA-BQ31612 363 aa11.12□□□□□ -0.63
APTX-230ENST00000494649 SPOCK2Q92563 424 aa11.12□□□□□ -0.63
APTX-230ENST00000494649 RTP4Q96DX8 246 aa11.12□□□□□ -0.63
APTX-230ENST00000494649 NAP1L3Q99457 506 aaPredicted RBP11.12□□□□□ -0.63
APTX-230ENST00000494649 AGAP2Q99490 1192 aa11.12□□□□□ -0.63
APTX-230ENST00000494649 TBL1YQ9BQ87 522 aa11.12□□□□□ -0.63
APTX-230ENST00000494649 FRMD8P1Q9BZ68 369 aaPredicted RBP11.12□□□□□ -0.63
APTX-230ENST00000494649 GPR63Q9BZJ6 419 aa11.12□□□□□ -0.63
APTX-230ENST00000494649 ZFYVE1Q9HBF4 777 aa11.12□□□□□ -0.63
APTX-230ENST00000494649 PPIL1Q9Y3C6 166 aa11.12□□□□□ -0.63
APTX-230ENST00000494649 ZNF711Q9Y462 761 aa11.12□□□□□ -0.63
APTX-230ENST00000494649 TMEM131Q92545 1883 aa11.12□□□□□ -0.63
APTX-230ENST00000494649 GOLGA6L10A0A0M3HER8 536 aa11.12□□□□□ -0.63
APTX-230ENST00000494649 PRR5-ARHGAP8B1AHC4 643 aa11.12□□□□□ -0.63
APTX-230ENST00000494649 CDX4O14627 284 aaPredicted RBP11.12□□□□□ -0.63
APTX-230ENST00000494649 VILLO15195 856 aa11.12□□□□□ -0.63
APTX-230ENST00000494649 APRTP07741 180 aa11.12□□□□□ -0.63
APTX-230ENST00000494649 HOXD12P35452 270 aa11.12□□□□□ -0.63
APTX-230ENST00000494649 COILP38432 576 aaPredicted RBP11.12□□□□□ -0.63
APTX-230ENST00000494649 CDKN3Q16667 212 aa11.12□□□□□ -0.63
APTX-230ENST00000494649 KCTD16Q68DU8 428 aa11.12□□□□□ -0.63
APTX-230ENST00000494649 RAET1GQ6H3X3 334 aa11.12□□□□□ -0.63
APTX-230ENST00000494649 TRIM74Q86UV6 250 aa11.12□□□□□ -0.63
APTX-230ENST00000494649 COQ10AQ96MF6 247 aa11.12□□□□□ -0.63
APTX-230ENST00000494649 LGR4Q9BXB1 951 aa11.12□□□□□ -0.63
APTX-230ENST00000494649 ARFGAP3Q9NP61 516 aa11.12□□□□□ -0.63
APTX-230ENST00000494649 KCTD3Q9Y597 815 aa11.12□□□□□ -0.63
APTX-230ENST00000494649 ARL5AQ9Y689 179 aa11.12□□□□□ -0.63
APTX-230ENST00000494649 A6NNZ2 444 aa11.11□□□□□ -0.63
APTX-230ENST00000494649 CCL22O00626 93 aa11.11□□□□□ -0.63
APTX-230ENST00000494649 INPP4BO15327 924 aa11.11□□□□□ -0.63
APTX-230ENST00000494649 GPR39O43194 453 aa11.11□□□□□ -0.63
APTX-230ENST00000494649 PHF2O75151 1096 aa11.11□□□□□ -0.63
APTX-230ENST00000494649 KCNA4P22459 653 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms