RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 CFAP47Q6ZTR5 3102 aa15.62■□□□□ 0.09
LIMS2-216ENST00000494613 ZNF487B1APH4 448 aa15.61■□□□□ 0.09
LIMS2-216ENST00000494613 PRLP01236 227 aa15.61■□□□□ 0.09
LIMS2-216ENST00000494613 FUCA1P04066 466 aa15.61■□□□□ 0.09
LIMS2-216ENST00000494613 TNNT1P13805 278 aa15.61■□□□□ 0.09
LIMS2-216ENST00000494613 LHCGRP22888 699 aa15.61■□□□□ 0.09
LIMS2-216ENST00000494613 ETV3P41162 512 aa15.61■□□□□ 0.09
LIMS2-216ENST00000494613 SLC1A1P43005 524 aa15.61■□□□□ 0.09
LIMS2-216ENST00000494613 KIAA1024LP59773 190 aa15.61■□□□□ 0.09
LIMS2-216ENST00000494613 PTSQ03393 145 aa15.61■□□□□ 0.09
LIMS2-216ENST00000494613 ARHGEF7Q14155 803 aa15.61■□□□□ 0.09
LIMS2-216ENST00000494613 PERM1Q5SV97 790 aa15.61■□□□□ 0.09
LIMS2-216ENST00000494613 LRRC38Q5VT99 294 aa15.61■□□□□ 0.09
LIMS2-216ENST00000494613 CRTC1Q6UUV9 634 aa15.61■□□□□ 0.09
LIMS2-216ENST00000494613 RFLNAQ6ZTI6 216 aa15.61■□□□□ 0.09
LIMS2-216ENST00000494613 TECPR1Q7Z6L1 1165 aa15.61■□□□□ 0.09
LIMS2-216ENST00000494613 GKN2Q86XP6 184 aa15.61■□□□□ 0.09
LIMS2-216ENST00000494613 CCDC13Q8IYE1 715 aa15.61■□□□□ 0.09
LIMS2-216ENST00000494613 PLD5Q8N7P1 536 aa15.61■□□□□ 0.09
LIMS2-216ENST00000494613 HNRNPLLQ8WVV9 542 aaKnown RBP15.61■□□□□ 0.09
LIMS2-216ENST00000494613 RNF25Q96BH1 459 aaPredicted RBP15.61■□□□□ 0.09
LIMS2-216ENST00000494613 HDAC11Q96DB2 347 aa15.61■□□□□ 0.09
LIMS2-216ENST00000494613 NUS1Q96E22 293 aa15.61■□□□□ 0.09
LIMS2-216ENST00000494613 RBM15Q96T37 977 aaKnown RBP eCLIP15.61■□□□□ 0.09
LIMS2-216ENST00000494613 GPR34Q9UPC5 381 aa15.61■□□□□ 0.09
LIMS2-216ENST00000494613 HEY1Q9Y5J3 304 aa15.61■□□□□ 0.09
LIMS2-216ENST00000494613 URB1O60287 2271 aaKnown RBP15.61■□□□□ 0.09
LIMS2-216ENST00000494613 ANKRD36A6QL64 1941 aa15.6■□□□□ 0.09
LIMS2-216ENST00000494613 MYLKQ15746 1914 aa15.6■□□□□ 0.09
LIMS2-216ENST00000494613 KCNK1O00180 336 aa15.6■□□□□ 0.09
LIMS2-216ENST00000494613 PSMD11O00231 422 aa15.6■□□□□ 0.09
LIMS2-216ENST00000494613 PDE2AO00408 941 aaPredicted RBP15.6■□□□□ 0.09
LIMS2-216ENST00000494613 KRT10P13645 584 aa15.6■□□□□ 0.09
LIMS2-216ENST00000494613 COMTP21964 271 aa15.6■□□□□ 0.09
LIMS2-216ENST00000494613 KELP23276 732 aa15.6■□□□□ 0.09
LIMS2-216ENST00000494613 NOP2P46087 812 aaKnown RBP15.6■□□□□ 0.09
LIMS2-216ENST00000494613 FAM182AQ5T1J6 154 aa15.6■□□□□ 0.09
LIMS2-216ENST00000494613 SLC9A4Q6AI14 798 aa15.6■□□□□ 0.09
LIMS2-216ENST00000494613 OGFOD3Q6PK18 319 aa15.6■□□□□ 0.09
LIMS2-216ENST00000494613 USP45Q70EL2 814 aa15.6■□□□□ 0.09
LIMS2-216ENST00000494613 VSIG1Q86XK7 387 aa15.6■□□□□ 0.09
LIMS2-216ENST00000494613 RHOT1Q8IXI2 618 aa15.6■□□□□ 0.09
LIMS2-216ENST00000494613 CNTD1Q8N815 330 aa15.6■□□□□ 0.09
LIMS2-216ENST00000494613 NXPE2Q96DL1 559 aa15.6■□□□□ 0.09
LIMS2-216ENST00000494613 DTD2Q96FN9 168 aa15.6■□□□□ 0.09
LIMS2-216ENST00000494613 TEX101Q9BY14 249 aa15.6■□□□□ 0.09
LIMS2-216ENST00000494613 TMEM168Q9H0V1 697 aa15.6■□□□□ 0.09
LIMS2-216ENST00000494613 CYP4F12Q9HCS2 524 aa15.6■□□□□ 0.09
LIMS2-216ENST00000494613 FGF22Q9HCT0 170 aa15.6■□□□□ 0.09
LIMS2-216ENST00000494613 SIRPGQ9P1W8 387 aa15.6■□□□□ 0.09
LIMS2-216ENST00000494613 MOSPD1Q9UJG1 213 aa15.6■□□□□ 0.09
LIMS2-216ENST00000494613 TTLL3Q9Y4R7 772 aa15.6■□□□□ 0.09
LIMS2-216ENST00000494613 PCDHB1Q9Y5F3 818 aa15.6■□□□□ 0.09
LIMS2-216ENST00000494613 ALG6Q9Y672 507 aa15.6■□□□□ 0.09
LIMS2-216ENST00000494613 ASXL3Q9C0F0 2248 aa15.6■□□□□ 0.09
LIMS2-216ENST00000494613 SHROOM3Q8TF72 1996 aa15.6■□□□□ 0.09
LIMS2-216ENST00000494613 DSPP15924 2871 aaKnown RBP15.59■□□□□ 0.09
LIMS2-216ENST00000494613 A0A0J9YYE9 177 aa15.59■□□□□ 0.09
LIMS2-216ENST00000494613 CASC3O15234 703 aaKnown RBP15.59■□□□□ 0.09
LIMS2-216ENST00000494613 TRBC1P01850 177 aa15.59■□□□□ 0.09
LIMS2-216ENST00000494613 HLA-DQB2P05538 268 aa15.59■□□□□ 0.09
LIMS2-216ENST00000494613 CEACAM5P06731 702 aa15.59■□□□□ 0.09
LIMS2-216ENST00000494613 EPHB1P54762 984 aa15.59■□□□□ 0.09
LIMS2-216ENST00000494613 PPIDQ08752 370 aaKnown RBP15.59■□□□□ 0.09
LIMS2-216ENST00000494613 NPNTQ6UXI9 565 aa15.59■□□□□ 0.09
LIMS2-216ENST00000494613 TAF8Q7Z7C8 310 aa15.59■□□□□ 0.09
LIMS2-216ENST00000494613 FAM46DQ8NEK8 389 aa15.59■□□□□ 0.09
LIMS2-216ENST00000494613 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.59■□□□□ 0.09
LIMS2-216ENST00000494613 PDXPQ96GD0 296 aa15.59■□□□□ 0.09
LIMS2-216ENST00000494613 DEPDC7Q96QD5 511 aa15.59■□□□□ 0.09
LIMS2-216ENST00000494613 RBSNQ9H1K0 784 aa15.59■□□□□ 0.09
LIMS2-216ENST00000494613 ABCG8Q9H221 673 aa15.59■□□□□ 0.09
LIMS2-216ENST00000494613 WDR26Q9H7D7 661 aa15.59■□□□□ 0.09
LIMS2-216ENST00000494613 HAUS2Q9NVX0 235 aa15.59■□□□□ 0.09
LIMS2-216ENST00000494613 DDX56Q9NY93 547 aaKnown RBP15.59■□□□□ 0.09
LIMS2-216ENST00000494613 PCDHA13Q9Y5I0 950 aa15.59■□□□□ 0.09
LIMS2-216ENST00000494613 APOL1O14791 398 aa15.58■□□□□ 0.08
LIMS2-216ENST00000494613 USP12O75317 370 aa15.58■□□□□ 0.08
LIMS2-216ENST00000494613 CSO75390 466 aaKnown RBP15.58■□□□□ 0.08
LIMS2-216ENST00000494613 LCA5LO95447 670 aa15.58■□□□□ 0.08
LIMS2-216ENST00000494613 CLDN7O95471 211 aa15.58■□□□□ 0.08
LIMS2-216ENST00000494613 MMP2P08253 660 aa15.58■□□□□ 0.08
LIMS2-216ENST00000494613 ZFXP17010 805 aaPredicted RBP15.58■□□□□ 0.08
LIMS2-216ENST00000494613 DPTQ07507 201 aa15.58■□□□□ 0.08
LIMS2-216ENST00000494613 AP1B1Q10567 949 aa15.58■□□□□ 0.08
LIMS2-216ENST00000494613 ISXQ2M1V0 245 aa15.58■□□□□ 0.08
LIMS2-216ENST00000494613 ODF2Q5BJF6 829 aa15.58■□□□□ 0.08
LIMS2-216ENST00000494613 LRRC66Q68CR7 880 aa15.58■□□□□ 0.08
LIMS2-216ENST00000494613 MFSD7Q6UXD7 560 aa15.58■□□□□ 0.08
LIMS2-216ENST00000494613 B4GALNT4Q76KP1 1039 aa15.58■□□□□ 0.08
LIMS2-216ENST00000494613 NLRP8Q86W28 1048 aa15.58■□□□□ 0.08
LIMS2-216ENST00000494613 RFX6Q8HWS3 928 aa15.58■□□□□ 0.08
LIMS2-216ENST00000494613 CCDC170Q8IYT3 715 aa15.58■□□□□ 0.08
LIMS2-216ENST00000494613 CCL4L1Q8NHW4 92 aa15.58■□□□□ 0.08
LIMS2-216ENST00000494613 NAT6Q93015 286 aa15.58■□□□□ 0.08
LIMS2-216ENST00000494613 ZNF830Q96NB3 372 aaPredicted RBP15.58■□□□□ 0.08
LIMS2-216ENST00000494613 CCDC3Q9BQI4 270 aa15.58■□□□□ 0.08
LIMS2-216ENST00000494613 PCDH9Q9HC56 1237 aa15.58■□□□□ 0.08
LIMS2-216ENST00000494613 PHPT1Q9NRX4 125 aaPredicted RBP15.58■□□□□ 0.08
LIMS2-216ENST00000494613 CD84Q9UIB8 345 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms